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1PKT
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BU of 1pkt by Molmil
STRUCTURE OF THE PI3K SH3 DOMAIN AND ANALYSIS OF THE SH3 FAMILY
分子名称: PHOSPHATIDYLINOSITOL 3-KINASE P85-ALPHA SUBUNIT SH3 DOMAIN
著者Koyama, S, Yu, H, Dalgarno, D.C, Shin, T.B, Zydowsky, L.D, Schreiber, S.L.
登録日1994-03-07
公開日1994-05-31
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure of the PI3K SH3 domain and analysis of the SH3 family.
Cell(Cambridge,Mass.), 72, 1993
1PKS
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BU of 1pks by Molmil
STRUCTURE OF THE PI3K SH3 DOMAIN AND ANALYSIS OF THE SH3 FAMILY
分子名称: PHOSPHATIDYLINOSITOL 3-KINASE P85-ALPHA SUBUNIT SH3 DOMAIN
著者Koyama, S, Yu, H, Dalgarno, D.C, Shin, T.B, Zydowsky, L.D, Schreiber, S.L.
登録日1994-03-07
公開日1994-05-31
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure of the PI3K SH3 domain and analysis of the SH3 family.
Cell(Cambridge,Mass.), 72, 1993
2RQR
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BU of 2rqr by Molmil
The solution structure of human DOCK2 SH3 domain - ELMO1 peptide chimera complex
分子名称: Engulfment and cell motility protein 1,Dedicator of cytokinesis protein 2
著者Yokoyama, S, Tochio, N, Koshiba, S, Kigawa, T, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-10-21
公開日2010-10-27
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural basis for mutual relief of the Rac guanine nucleotide exchange factor DOCK2 and its partner ELMO1 from their autoinhibited forms.
Proc.Natl.Acad.Sci.USA, 109, 2012
2DVW
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BU of 2dvw by Molmil
Structure of the Oncoprotein Gankyrin in Complex with S6 ATPase of the 26S Proteasome
分子名称: 26S protease regulatory subunit 6B, 26S proteasome non-ATPase regulatory subunit 10
著者Yokoyama, S, Padmanabhan, B, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-08-01
公開日2007-03-13
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of the Oncoprotein Gankyrin in Complex with S6 ATPase of the 26S Proteasome
Structure, 15, 2007
2DZN
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BU of 2dzn by Molmil
Crystal structure analysis of yeast Nas6p complexed with the proteasome subunit, rpt3
分子名称: 26S protease regulatory subunit 6B homolog, Probable 26S proteasome regulatory subunit p28
著者Yokoyama, S, Padmanabhan, B, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-09-29
公開日2007-07-17
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis for the recognition between the regulatory particles Nas6 and Rpt3 of the yeast 26S proteasome
Biochem.Biophys.Res.Commun., 359, 2007
1BQT
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BU of 1bqt by Molmil
THREE-DIMENSIONAL STRUCTURE OF HUMAN INSULIN-LIKE GROWTH FACTOR-I (IGF-I) DETERMINED BY 1H-NMR AND DISTANCE GEOMETRY, 6 STRUCTURES
分子名称: INSULIN-LIKE GROWTH FACTOR-I
著者Sato, A, Nishimura, S, Ohkubo, T, Kyogoku, Y, Koyama, S, Kobayashi, M, Yasuda, T, Kobayashi, Y.
登録日1998-08-18
公開日1999-05-18
最終更新日2022-02-16
実験手法SOLUTION NMR
主引用文献Three-dimensional structure of human insulin-like growth factor-I (IGF-I) determined by 1H-NMR and distance geometry.
Int.J.Pept.Protein Res., 41, 1993
1VEE
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BU of 1vee by Molmil
NMR structure of the hypothetical rhodanese domain At4g01050 from Arabidopsis thaliana
分子名称: proline-rich protein family
著者Pantoja-Uceda, D, Lopez-Mendez, B, Koshiba, S, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Tanaka, A, Seki, M, Shinozaki, K, Yokoyama, S, Guntert, P, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-03-30
公開日2005-01-25
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of the rhodanese homology domain At4g01050(175-295) from Arabidopsis thaliana
Protein Sci., 14, 2005
3BOY
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BU of 3boy by Molmil
Crystal structure of the HutP antitermination complex bound to the HUT mRNA
分子名称: 5'-R(*UP*UP*UP*AP*GP*UP*UP*UP*UP*UP*AP*GP*UP*UP*UP*UP*UP*AP*GP*UP*UP*U)-3', HISTIDINE, Hut operon positive regulatory protein, ...
著者Kumarevel, T.S, Balasundaresan, D, Jeyakanthan, J, Shinkai, A, Yokoyama, S, Kumar, P.K.R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-12-18
公開日2008-01-15
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal Structure of HutP complexed with the 55-mer RNA
To be Published
1VDH
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BU of 1vdh by Molmil
Structure-based functional identification of a novel heme-binding protein from thermus thermophilus HB8
分子名称: muconolactone isomerase-like protein
著者Ebihara, A, Okamoto, A, Kousumi, Y, Yamamoto, H, Masui, R, Ueyama, N, Shibata, T, Inoue, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-03-22
公開日2004-09-22
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure-based functional identification of a novel heme-binding protein from Thermus thermophilus HB8.
J.STRUCT.FUNCT.GENOM., 6, 2005
1VCS
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BU of 1vcs by Molmil
Solution Structure of RSGI RUH-009, an N-Terminal Domain of Vti1a [Mus musculus]
分子名称: Vesicle transport through interaction with t-SNAREs homolog 1A
著者Abe, T, Hirota, H, Tomizawa, T, Koshiba, S, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-03-10
公開日2005-05-03
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution Structure of RSGI RUH-009, an N-Terminal Domain of Vti1a [Mus musculus]
To be Published
2QQ1
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BU of 2qq1 by Molmil
Crystal Structure Of Molybdenum Cofactor Biosynthesis (aq_061) Other Form From Aquifex Aeolicus Vf5
分子名称: Molybdenum cofactor biosynthesis MOG
著者Jeyakanthan, J, Mahesh, S, Kanaujia, S.P, Ramakumar, S, Sekar, K, Agari, Y, Ebihara, A, Kuramitsu, S, Shinkai, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-07-26
公開日2008-07-29
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure Of Molybdenum Cofactor Biosynthesis (aq_061) Other Form From Aquifex Aeolicus Vf5
To be Published
1VS3
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BU of 1vs3 by Molmil
Crystal Structure of the tRNA Pseudouridine Synthase TruA From Thermus thermophilus HB8
分子名称: tRNA pseudouridine synthase A
著者Dong, X, Bessho, Y, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-06-28
公開日2006-12-12
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal structure of tRNA pseudouridine synthase TruA from Thermus thermophilus HB8.
Rna Biol., 3, 2006
5KNC
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BU of 5knc by Molmil
Crystal structure of the 3 ADP-bound V1 complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
著者Suzuki, K, Mizutani, K, Maruyama, S, Shimono, K, Imai, F.L, Muneyuki, E, Kakinuma, Y, Ishizuka-Katsura, Y, Shirouzu, M, Yokoyama, S, Yamato, I, Murata, T.
登録日2016-06-28
公開日2016-11-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.015 Å)
主引用文献Crystal structures of the ATP-binding and ADP-release dwells of the V1 rotary motor
Nat Commun, 7, 2016
3U6U
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BU of 3u6u by Molmil
Crystal structure of the putative acetylglutamate kinase from thermus thermophilus
分子名称: Putative acetylglutamate kinase, SULFATE ION
著者Karthe, P, Kumarevel, T.S, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2011-10-13
公開日2011-11-16
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献The structure of first dimeric archaeal N-acetyl glutamate kinase reveals an intermediate conformation of the enzyme in the catalytic cycle
To be Published
2QQ4
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BU of 2qq4 by Molmil
Crystal structure of Iron-sulfur cluster biosynthesis protein IscU (TTHA1736) from thermus thermophilus HB8
分子名称: Iron-sulfur cluster biosynthesis protein IscU, ZINC ION
著者Jeyakanthan, J, Kanaujia, S.P, Sekar, K, Agari, Y, Ebihara, A, Shinkai, A, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-07-26
公開日2008-07-29
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structure of Iron-sulfur cluster biosynthesis protein IscU (TTHA1736) from thermus thermophilus HB8
To be Published
2QYH
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BU of 2qyh by Molmil
Crystal structure of the hypothetical protein (gk1056) from geobacillus kaustophilus HTA426
分子名称: GLYCEROL, Hypothetical conserved protein, GK1056
著者Jeyakanthan, J, Kanaujia, S.P, Sekar, K, Ebihara, A, Shinkai, A, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-08-15
公開日2008-08-19
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of the hypothetical protein (gk1056) from geobacillus kaustophilus HTA426
To be Published
1VG5
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BU of 1vg5 by Molmil
Solution Structure of RSGI RUH-014, a UBA domain from Arabidopsis cDNA
分子名称: rhomboid family protein
著者Onuki, H, Doi-Katayama, Y, Hayashi, F, Hirota, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-04-23
公開日2004-10-23
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution Structure of RSGI RUH-014, a UBA domain from Arabidopsis thaliana cDNA
To be Published
1VEH
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BU of 1veh by Molmil
Solution structure of RSGI RUH-018, a NifU-like domain of hirip5 protein from mouse cDNA
分子名称: NifU-like protein HIRIP5
著者Ohashi, W, Hirota, H, Yamazaki, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-03-31
公開日2004-09-30
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of RSGI RUH-018, a NifU-like domain of hirip5 protein from mouse cDNA
To be published
1VEJ
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BU of 1vej by Molmil
Solution Structure of RSGI RUH-016, a UBA Domain from mouse cDNA
分子名称: RIKEN cDNA 4931431F19
著者Higuchi, Y, Abe, T, Hirota, H, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-03-31
公開日2005-05-31
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution Structure of RSGI RUH-016, a UBA Domain from mouse cDNA
To be Published
2FHO
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BU of 2fho by Molmil
NMR solution structure of the human spliceosomal protein complex p14-SF3b155
分子名称: spliceosomal protein SF3b155, spliceosomal protein p14
著者Kuwasako, K, Dohmae, N, Inoue, M, Shirouzu, M, Guntert, P, Seraphin, B, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-12-26
公開日2006-12-26
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献NMR solution structure of the human spliceosomal protein complex p14-SF3b155
To be Published
2FC7
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BU of 2fc7 by Molmil
Solution structure of the ZZ domain of ZZZ3 protein
分子名称: ZINC ION, ZZZ3 protein
著者Dang, W, Muto, Y, Inoue, M, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-12-12
公開日2006-06-12
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献Solution structure of the ZZ domain of ZZZ3 protein
To be published
2FC9
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BU of 2fc9 by Molmil
Solution structure of the RRM_1 domain of NCL protein
分子名称: NCL protein
著者Dang, W, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-12-12
公開日2006-06-12
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献Solution structure of the RRM_1 domain of NCL protein
To be published
2FC8
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Solution structure of the RRM_1 domain of NCL protein
分子名称: NCL protein
著者Dang, W, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-12-12
公開日2006-06-12
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献Solution structure of the RRM_1 domain of NCL protein
To be published
3VA2
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BU of 3va2 by Molmil
Crystal structure of human Interleukin-5 in complex with its alpha receptor
分子名称: Interleukin-5, Interleukin-5 receptor subunit alpha
著者Kusano, S, Kukimoto-Niino, M, Shirouzu, M, Yokoyama, S.
登録日2011-12-28
公開日2012-07-25
実験手法X-RAY DIFFRACTION (2.703 Å)
主引用文献Structural basis of interleukin-5 dimer recognition by its alpha receptor
Protein Sci., 21, 2012
1N75
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BU of 1n75 by Molmil
Crystal structure of Thermus thermophilus glutamyl-tRNA synthetase complexed with ATP.
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Glutamyl-tRNA synthetase, MAGNESIUM ION
著者Sekine, S, Nureki, O, Dubois, D.Y, Bernier, S, Chenevert, R, Lapointe, J, Vassylyev, D.G, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-11-12
公開日2003-02-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献ATP binding by glutamyl-tRNA synthetase is switched to the productive mode by tRNA binding
EMBO J., 22, 2003

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