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6K1G
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BU of 6k1g by Molmil
Crystal structure of the L-fucose isomerase soaked with Mn2+ from Raoultella sp.
Descriptor: L-fucose isomerase, MANGANESE (II) ION
Authors:Kim, I.J, Kim, D.H, Nam, K.H, Kim, K.H.
Deposit date:2019-05-10
Release date:2020-05-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.96 Å)
Cite:Enzymatic synthesis of l-fucose from l-fuculose using a fucose isomerase fromRaoultellasp. and the biochemical and structural analyses of the enzyme.
Biotechnol Biofuels, 12, 2019
6K1F
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BU of 6k1f by Molmil
Crystal structure of the L-fucose isomerase from Raoultella sp.
Descriptor: L-fucose isomerase, MANGANESE (II) ION
Authors:Kim, I.J, Kim, D.H, Nam, K.H, Kim, K.H.
Deposit date:2019-05-10
Release date:2020-05-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Enzymatic synthesis of l-fucose from l-fuculose using a fucose isomerase fromRaoultellasp. and the biochemical and structural analyses of the enzyme.
Biotechnol Biofuels, 12, 2019
3V9A
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BU of 3v9a by Molmil
Crystal structure of Esterase/Lipase from uncultured bacterium
Descriptor: Esterase/lipase, SULFATE ION
Authors:Kim, I.J, Nam, K.H.
Deposit date:2011-12-24
Release date:2012-02-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Crystal structure of Esterase/Lipase from uncultured bacterium
To be Published
5Z6V
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BU of 5z6v by Molmil
Crystal structure of a substrate-binding protein from Rhodothermus marinus
Descriptor: ABC-type uncharacterized transport system periplasmic component-like protein
Authors:Bae, J.E, Kim, I.J, Nam, K.H.
Deposit date:2018-01-25
Release date:2018-05-30
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Crystal structure of a substrate-binding protein from Rhodothermus marinus reveals a single alpha / beta-domain.
Biochem. Biophys. Res. Commun., 497, 2018
5Y8Q
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BU of 5y8q by Molmil
ZsYellow at pH 8.0
Descriptor: GFP-like fluorescent chromoprotein FP538
Authors:Bae, J.E, Kim, I.J, Nam, K.H.
Deposit date:2017-08-21
Release date:2017-09-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Disruption of the hydrogen bonding network determines the pH-induced non-fluorescent state of the fluorescent protein ZsYellow by protonation of Glu221.
Biochem. Biophys. Res. Commun., 493, 2017
5Y4J
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BU of 5y4j by Molmil
Crystal structure of glucose isomerase in complex with xylitol inhibitor in one metal binding mode
Descriptor: MAGNESIUM ION, Xylitol, Xylose isomerase
Authors:Bae, J.E, Kim, I.J, Nam, K.H.
Deposit date:2017-08-03
Release date:2017-09-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of glucose isomerase in complex with xylitol inhibitor in one metal binding mode
Biochem. Biophys. Res. Commun., 493, 2017
5Y4I
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BU of 5y4i by Molmil
Crystal structure of glucose isomerase in complex with glycerol in one metal binding mode
Descriptor: ACETATE ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Bae, J.E, Kim, I.J, Nam, K.H.
Deposit date:2017-08-03
Release date:2017-09-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Crystal structure of glucose isomerase in complex with xylitol inhibitor in one metal binding mode
Biochem. Biophys. Res. Commun., 493, 2017
5Y8R
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BU of 5y8r by Molmil
ZsYellow at pH 3.5
Descriptor: GFP-like fluorescent chromoprotein FP538
Authors:Bae, J.E, Kim, I.J, Nam, K.H.
Deposit date:2017-08-21
Release date:2017-09-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Disruption of the hydrogen bonding network determines the pH-induced non-fluorescent state of the fluorescent protein ZsYellow by protonation of Glu221.
Biochem. Biophys. Res. Commun., 493, 2017
8IH0
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BU of 8ih0 by Molmil
Crystal structure of GH11 from Thermoanaerobacterium saccharolyticum
Descriptor: ACETATE ION, Endo-1,4-beta-xylanase
Authors:Nam, K.H.
Deposit date:2023-02-22
Release date:2023-11-22
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Characterization and structural analysis of the endo-1,4-beta-xylanase GH11 from the hemicellulose-degrading Thermoanaerobacterium saccharolyticum useful for lignocellulose saccharification.
Sci Rep, 13, 2023
8IH1
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BU of 8ih1 by Molmil
Room temperature structure of GH11 from Thermoanaerobacterium saccharolyticum by serial crystallography
Descriptor: ACETATE ION, Endo-1,4-beta-xylanase
Authors:Nam, K.H.
Deposit date:2023-02-22
Release date:2023-11-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Characterization and structural analysis of the endo-1,4-beta-xylanase GH11 from the hemicellulose-degrading Thermoanaerobacterium saccharolyticum useful for lignocellulose saccharification.
Sci Rep, 13, 2023
6LOF
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BU of 6lof by Molmil
Crystal structure of ZsYellow soaked by Cu2+
Descriptor: GFP-like fluorescent chromoprotein FP538
Authors:Nam, K.H.
Deposit date:2020-01-05
Release date:2020-01-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Spectroscopic and Structural Analysis of Cu 2+ -Induced Fluorescence Quenching of ZsYellow.
Biosensors (Basel), 10, 2020
5HZT
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BU of 5hzt by Molmil
Crystal structure of Dronpa-Cu2+
Descriptor: COPPER (II) ION, Fluorescent protein Dronpa
Authors:Hwang, K.Y, Nam, K.H.
Deposit date:2016-02-03
Release date:2017-03-15
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:Crystal structures of Dronpa complexed with quenchable metal ions provide insight into metal biosensor development
FEBS Lett., 590, 2016
5HZU
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BU of 5hzu by Molmil
Crystal structure of Dronpa-Ni2+
Descriptor: Fluorescent protein Dronpa, NICKEL (II) ION
Authors:Hwang, K.Y, Nam, K.H.
Deposit date:2016-02-03
Release date:2017-03-15
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Crystal structures of Dronpa complexed with quenchable metal ions provide insight into metal biosensor development
FEBS Lett., 590, 2016
5HZS
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BU of 5hzs by Molmil
Crystal structure of Dronpa-Co2+
Descriptor: COBALT (II) ION, Fluorescent protein Dronpa
Authors:Hwang, K.Y, Nam, K.H.
Deposit date:2016-02-03
Release date:2017-03-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Crystal structures of Dronpa complexed with quenchable metal ions provide insight into metal biosensor development
FEBS Lett., 590, 2016
7DIG
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BU of 7dig by Molmil
Green fluorescent protein from Dendronephthya sp. SSAL-2002
Descriptor: Green fluorescent protein
Authors:Nam, K.H.
Deposit date:2020-11-19
Release date:2021-12-08
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Metal-Induced Fluorescence Quenching of Photoconvertible Fluorescent Protein DendFP.
Molecules, 27, 2022
7E5J
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BU of 7e5j by Molmil
Crystal structure of beta-glucosidase from Thermoanaerobacterium saccharolyticum
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-glucosidase, SODIUM ION
Authors:Nam, K.H.
Deposit date:2021-02-18
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Biochemical and Structural Analysis of a Glucose-Tolerant beta-Glucosidase from the Hemicellulose-Degrading Thermoanaerobacterium saccharolyticum.
Molecules, 27, 2022

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PDB entries from 2024-10-30

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