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2Z8X
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BU of 2z8x by Molmil
Crystal structure of extracellular lipase from Pseudomonas sp. MIS38
Descriptor: CALCIUM ION, Lipase, ZINC ION
Authors:Angkawidjaja, C, You, D.J, Matsumura, H, Koga, Y, Takano, K, Kanaya, S.
Deposit date:2007-09-11
Release date:2007-10-30
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Crystal structure of a family I.3 lipase from Pseudomonas sp. MIS38 in a closed conformation
FEBS Lett., 581, 2007
3AUK
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BU of 3auk by Molmil
Crystal structure of a lipase from Geobacillus sp. SBS-4S
Descriptor: CALCIUM ION, CHLORIDE ION, Lipase, ...
Authors:Angkawidjaja, C, Tayyab, M, Rashid, N, Kanaya, S.
Deposit date:2011-02-08
Release date:2012-02-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Crystal structure of a lipase from Geobacillus sp. SBS-4S
TO BE PUBLISHED
2ZJ7
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BU of 2zj7 by Molmil
Crystal structure of D157A mutant of Pseudomonas sp. MIS38 lipase
Descriptor: CALCIUM ION, Lipase, ZINC ION
Authors:Angkawidjaja, C, Kuwahara, K, Kanaya, S.
Deposit date:2008-02-29
Release date:2008-12-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Importance of the Ca2+-binding sites in the N-catalytic domain of a family I.3 lipase for activity and stability
Protein Eng.Des.Sel., 21, 2008
2ZF5
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BU of 2zf5 by Molmil
Crystal Structure of highly thermostable glycerol kinase from a hyperthermophilic archaeon
Descriptor: Glycerol kinase
Authors:Koga, Y, Katsumi, R, You, D.-J, Matsumura, H, Takano, K, Kanaya, S.
Deposit date:2007-12-20
Release date:2008-05-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of highly thermostable glycerol kinase from a hyperthermophilic archaeon in a dimeric form
Febs J., 275, 2008
3AIN
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BU of 3ain by Molmil
R267G mutant of a HSL-like carboxylesterase from Sulfolobus tokodaii
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 303aa long hypothetical esterase, ...
Authors:Angkawidjaja, C, Kanaya, S.
Deposit date:2010-05-16
Release date:2011-06-08
Last modified:2012-09-05
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure and stability of a thermostable carboxylesterase from the thermoacidophilic archaeon Sulfolobustokodaii
Febs J., 279, 2012
3AIO
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BU of 3aio by Molmil
R267K mutant of a HSL-like carboxylesterase from Sulfolobus tokodaii
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 303aa long hypothetical esterase, ...
Authors:Angkawidjaja, C, Kanaya, S.
Deposit date:2010-05-16
Release date:2011-06-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure and stability of a thermostable carboxylesterase from the thermoacidophilic archaeon Sulfolobustokodaii
Febs J., 279, 2012
3B09
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BU of 3b09 by Molmil
Crystal structure of the N-domain of FKBP22 from Shewanella sp. SIB1
Descriptor: Peptidyl-prolyl cis-trans isomerase
Authors:Budiman, C, Angkawidjaja, C, Motoike, H, Koga, Y, Takano, K, Kanaya, S.
Deposit date:2011-06-07
Release date:2012-04-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of N-domain of FKBP22 from Shewanella sp. SIB1: dimer dissociation by disruption of Val-Leu knot
Protein Sci., 20, 2011
2ZVD
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BU of 2zvd by Molmil
Crystal structure of Pseudomonas sp. MIS38 lipase in an open conformation
Descriptor: CALCIUM ION, Lipase
Authors:Angkawidjaja, C, Matsumura, H, Koga, Y, Takano, K, Kanaya, S.
Deposit date:2008-11-05
Release date:2009-11-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:X-ray Crystallographic and MD Simulation Studies on the Mechanism of Interfacial Activation of a Family I.3 Lipase with Two Lids
J.Mol.Biol., 2010
2ZQB
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BU of 2zqb by Molmil
Crystal structure of a psychrotrophic RNaseHI variant with sextuple thermostabilizing mutations
Descriptor: Ribonuclease HI, SULFATE ION
Authors:Angkawidjaja, C, Kanaya, S.
Deposit date:2008-08-07
Release date:2009-06-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Destabilization of psychrotrophic RNase HI in a localized fashion as revealed by mutational and X-ray crystallographic analyses
Febs J., 276, 2009
3AIL
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BU of 3ail by Molmil
Crystal structure of a HSL-like carboxylesterase from Sulfolobus tokodaii complexed with paraoxon
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, 303aa long hypothetical esterase, DIETHYL PHOSPHONATE, ...
Authors:Angkawidjaja, C, Kanaya, S.
Deposit date:2010-05-16
Release date:2011-06-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Structure and stability of a thermostable carboxylesterase from the thermoacidophilic archaeon Sulfolobustokodaii
Febs J., 279, 2012
2ZJ6
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BU of 2zj6 by Molmil
Crystal structure of D337A mutant of Pseudomonas sp. MIS38 lipase
Descriptor: CALCIUM ION, Lipase, ZINC ION
Authors:Angkawidjaja, C, Kuwahara, K, Kanaya, S.
Deposit date:2008-02-29
Release date:2008-12-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Importance of the Ca2+-binding sites in the N-catalytic domain of a family I.3 lipase for activity and stability
Protein Eng.Des.Sel., 21, 2008
3AIK
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BU of 3aik by Molmil
Crystal structure of a HSL-like carboxylesterase from Sulfolobus tokodaii
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 303aa long hypothetical esterase, ...
Authors:Angkawidjaja, C, Kanaya, S.
Deposit date:2010-05-16
Release date:2011-06-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure and stability of a thermostable carboxylesterase from the thermoacidophilic archaeon Sulfolobustokodaii
Febs J., 279, 2012
3AIM
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BU of 3aim by Molmil
R267E mutant of a HSL-like carboxylesterase from Sulfolobus tokodaii
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 303aa long hypothetical esterase, ...
Authors:Angkawidjaja, C, Kanaya, S.
Deposit date:2010-05-16
Release date:2011-06-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and stability of a thermostable carboxylesterase from the thermoacidophilic archaeon Sulfolobustokodaii
Febs J., 279, 2012
3A6Z
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BU of 3a6z by Molmil
Crystal structure of Pseudomonas sp. MIS38 lipase (PML) in the open conformation following dialysis against Ca-free buffer
Descriptor: CALCIUM ION, Lipase
Authors:Angkawidjaja, C, Matsumura, H, Koga, Y, Takano, K, Kanaya, S.
Deposit date:2009-09-10
Release date:2010-05-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:X-ray Crystallographic and MD Simulation Studies on the Mechanism of Interfacial Activation of a Family I.3 Lipase with Two Lids
J.Mol.Biol., 2010
1RDB
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BU of 1rdb by Molmil
CRYSTAL STRUCTURES OF RIBONUCLEASE HI ACTIVE SITE MUTANTS FROM ESCHERICHIA COLI
Descriptor: RIBONUCLEASE H
Authors:Katayanagi, K, Morikawa, K.
Deposit date:1993-06-23
Release date:1993-10-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of ribonuclease HI active site mutants from Escherichia coli.
J.Biol.Chem., 268, 1993
1RDA
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BU of 1rda by Molmil
CRYSTAL STRUCTURES OF RIBONUCLEASE HI ACTIVE SITE MUTANTS FROM ESCHERICHIA COLI
Descriptor: RIBONUCLEASE H
Authors:Katayanagi, K, Morikawa, K.
Deposit date:1993-06-23
Release date:1993-10-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structures of ribonuclease HI active site mutants from Escherichia coli.
J.Biol.Chem., 268, 1993
5X7K
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BU of 5x7k by Molmil
Crystal structure of the nucleotide-binding domain (NBD) of LipB, a ABC transporter subunit of a type I secretion system
Descriptor: Lipase B
Authors:Okano, H, Angkawidjaja, C, Takano, K.
Deposit date:2017-02-27
Release date:2017-11-15
Last modified:2017-12-13
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural Basis for the Serratia marcescens Lipase Secretion System: Crystal Structures of the Membrane Fusion Protein and Nucleotide-Binding Domain
Biochemistry, 56, 2017
5NEN
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BU of 5nen by Molmil
Crystal structure of the soluble domain of LipC, a membrane fusion protein of a type I secretion system
Descriptor: Lipase C
Authors:Murata, D, Akutsu, M, Takano, K.
Deposit date:2017-03-11
Release date:2017-11-22
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (2.901 Å)
Cite:Structural Basis for the Serratia marcescens Lipase Secretion System: Crystal Structures of the Membrane Fusion Protein and Nucleotide-Binding Domain.
Biochemistry, 56, 2017
1RDC
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BU of 1rdc by Molmil
CRYSTAL STRUCTURES OF RIBONUCLEASE HI ACTIVE SITE MUTANTS FROM ESCHERICHIA COLI
Descriptor: RIBONUCLEASE H
Authors:Katayanagi, K, Morikawa, K.
Deposit date:1993-06-23
Release date:1993-10-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of ribonuclease HI active site mutants from Escherichia coli.
J.Biol.Chem., 268, 1993
6K79
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BU of 6k79 by Molmil
Glycerol kinase form Thermococcus kodakarensis, complex structure with substrate.
Descriptor: GLYCEROL, Glycerol kinase, TRIETHYLENE GLYCOL
Authors:Koga, Y, Angkawidjaja, C, Matsumura, H, Hokao, R.
Deposit date:2019-06-06
Release date:2020-06-10
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Structural analysis of hexameric structure of glycerol kinase from Thermococcus kodakaraeinsis KOD1
To Be Published
6K76
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BU of 6k76 by Molmil
Glycerol kinase form Thermococcus kodakarensis, complex structure with substrate.
Descriptor: Glycerol kinase, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Koga, Y, Angkawidjaja, C, Matsumura, H, Hokao, R.
Deposit date:2019-06-06
Release date:2020-06-10
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Structural analysis of hexameric structure of glycerol kinase from Thermococcus kodakaraeinsis KOD1
To Be Published
6K78
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BU of 6k78 by Molmil
Glycerol kinase form Thermococcus kodakarensis, complex structure with substrate.
Descriptor: GLYCEROL, Glycerol kinase, TRIETHYLENE GLYCOL
Authors:Koga, Y, Angkawidjaja, C, Matsumura, H, Hokao, R.
Deposit date:2019-06-06
Release date:2020-06-10
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.301 Å)
Cite:Structural analysis of hexameric structure of glycerol kinase from Thermococcus kodakaraeinsis KOD1
To Be Published
1RDD
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BU of 1rdd by Molmil
CRYSTAL STRUCTURE OF ESCHERICHIA COLI RNASE HI IN COMPLEX WITH MG2+ AT 2.8 ANGSTROMS RESOLUTION: PROOF FOR A SINGLE MG2+ SITE
Descriptor: MAGNESIUM ION, RIBONUCLEASE H
Authors:Katayanagi, K, Morikawa, K.
Deposit date:1993-06-23
Release date:1993-10-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of Escherichia coli RNase HI in complex with Mg2+ at 2.8 A resolution: proof for a single Mg(2+)-binding site.
Proteins, 17, 1993
1IO2
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BU of 1io2 by Molmil
Crystal structure of type 2 ribonuclease h from hyperthermophilic archaeon, thermococcus kodakaraensis kod1
Descriptor: RIBONUCLEASE HII
Authors:Muroya, A, Tsuchiya, D, Ishikawa, M, Haruki, M, Morikawa, M.
Deposit date:2000-12-28
Release date:2001-04-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Catalytic center of an archaeal type 2 ribonuclease H as revealed by X-ray crystallographic and mutational analyses.
Protein Sci., 10, 2001
3ATH
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BU of 3ath by Molmil
Crystal structure of Pyrococcus horikoshii kynurenine aminotransferase in complex with four AKGs as substrates and allosteric effectors
Descriptor: 2-OXOGLUTARIC ACID, PYRIDOXAL-5'-PHOSPHATE, Putative uncharacterized protein PH0207
Authors:Okada, K, Angkawidjaja, C, Koga, Y, Takano, K, Kanaya, S.
Deposit date:2011-01-05
Release date:2012-01-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Characterization of kynurenine aminotransferase from hyperthermophilic archaeon: enzymatic activity for conversion to kynurenic acid is allosterically regulated by alpha-ketoglutaric acid cooperatively with kynurenine
To be Published

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