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5JKC
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BU of 5jkc by Molmil
Crystal structure of human IZUMO1-JUNO complex (crystal form 1)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Izumo sperm-egg fusion protein 1, ...
Authors:Ohto, U, Ishida, H, Shimizu, T.
Deposit date:2016-04-26
Release date:2016-06-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of IZUMO1-JUNO reveals sperm-oocyte recognition during mammalian fertilization
Nature, 534, 2016
5JKD
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BU of 5jkd by Molmil
Crystal structure of human IZUMO1-JUNO complex (crystal form 2)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Izumo sperm-egg fusion protein 1, ...
Authors:Ohto, U, Ishida, H, Shimizu, T.
Deposit date:2016-04-26
Release date:2016-06-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of IZUMO1-JUNO reveals sperm-oocyte recognition during mammalian fertilization
Nature, 534, 2016
5JKE
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BU of 5jke by Molmil
Crystal structure of human IZUMO1-JUNO complex (crystal form 3)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Izumo sperm-egg fusion protein 1, ...
Authors:Ohto, U, Ishida, H, Shimizu, T.
Deposit date:2016-04-26
Release date:2016-06-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:Structure of IZUMO1-JUNO reveals sperm-oocyte recognition during mammalian fertilization
Nature, 534, 2016
5JKB
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BU of 5jkb by Molmil
Crystal structure of human JUNO (crystal form 2)
Descriptor: CHLORIDE ION, Sperm-egg fusion protein Juno
Authors:Ohto, U, Ishida, H, Shimizu, T.
Deposit date:2016-04-26
Release date:2016-06-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.23 Å)
Cite:Structure of IZUMO1-JUNO reveals sperm-oocyte recognition during mammalian fertilization
Nature, 534, 2016
5JKA
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BU of 5jka by Molmil
Crystal structure of human JUNO (crystal form 1)
Descriptor: CHLORIDE ION, Sperm-egg fusion protein Juno, alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Ohto, U, Ishida, H, Shimizu, T.
Deposit date:2016-04-26
Release date:2016-06-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of IZUMO1-JUNO reveals sperm-oocyte recognition during mammalian fertilization
Nature, 534, 2016
2KSZ
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BU of 2ksz by Molmil
The solution structure of the Magnesium bound soybean calmodulin isoform 4 N-domain
Descriptor: MAGNESIUM ION, Putative uncharacterized protein
Authors:Huang, H, Ishida, H, Vogel, H.J.
Deposit date:2010-01-14
Release date:2010-03-09
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The solution structure of the Mg2+ form of soybean calmodulin isoform 4 reveals unique features of plant calmodulins in resting cells.
Protein Sci., 19, 2010
1G01
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BU of 1g01 by Molmil
ALKALINE CELLULASE K CATALYTIC DOMAIN
Descriptor: ACETIC ACID, CADMIUM ION, ENDOGLUCANASE
Authors:Shirai, T, Ishida, H, Noda, J, Yamane, T, Ozaki, K, Hakamada, Y, Ito, S.
Deposit date:2000-10-05
Release date:2001-08-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of alkaline cellulase K: insight into the alkaline adaptation of an industrial enzyme.
J.Mol.Biol., 310, 2001
1G0C
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BU of 1g0c by Molmil
ALKALINE CELLULASE K CATALYTIC DOMAIN-CELLOBIOSE COMPLEX
Descriptor: ACETIC ACID, CADMIUM ION, ENDOGLUCANASE, ...
Authors:Shirai, T, Ishida, H, Noda, J, Yamane, T, Ozaki, K, Hakamada, Y, Ito, S.
Deposit date:2000-10-05
Release date:2001-08-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of alkaline cellulase K: insight into the alkaline adaptation of an industrial enzyme.
J.Mol.Biol., 310, 2001
2LX9
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BU of 2lx9 by Molmil
Solution Structure of Escherichia coli Ferrous Iron transport protein A (FeoA)
Descriptor: Ferrous iron transport protein A
Authors:Lau, C.K.Y, Ishida, H, Liu, Z, Vogel, H.J.
Deposit date:2012-08-16
Release date:2012-11-14
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution Structure of Escherichia coli FeoA and Its Potential Role in Bacterial Ferrous Iron Transport.
J.Bacteriol., 195, 2013
2M7E
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BU of 2m7e by Molmil
solution structure of the calmodulin-binding domain of plant calcium-ATPase ACA2
Descriptor: Calcium-transporting ATPase 2, plasma membrane-type
Authors:Jamshidiha, M, Ishida, H, Gifford, J.L, Vogel, H.J.
Deposit date:2013-04-21
Release date:2014-04-23
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural characterization of the interactions between calmodulin and three distinct plant calcium-ATPase pumps
To be Published
2N98
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BU of 2n98 by Molmil
Solution structure of acyl carrier protein LipD from Actinoplanes friuliensis
Descriptor: Acyl carrier protein
Authors:Paul, S, Ishida, H, Liu, Z, Nguyen, L.T, Vogel, H.J.
Deposit date:2015-11-10
Release date:2016-11-16
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural and dynamic characterization of a freestanding acyl carrier protein involved in the biosynthesis of cyclic lipopeptide antibiotics.
Protein Sci., 26, 2017
2LGF
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BU of 2lgf by Molmil
Solution structure of Ca2+/calmodulin complexed with a peptide representing the calmodulin-binding domain of L-selectin
Descriptor: CALCIUM ION, Calmodulin, L-selectin
Authors:Gifford, J.L, Ishida, H, Vogel, H.J.
Deposit date:2011-07-25
Release date:2012-06-13
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural Insights into Calmodulin-regulated L-selectin Ectodomain Shedding.
J.Biol.Chem., 287, 2012
2L7L
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BU of 2l7l by Molmil
Solution structure of Ca2+/calmodulin complexed with a peptide representing the calmodulin-binding domain of calmodulin kinase I
Descriptor: CALCIUM ION, Calcium/calmodulin-dependent protein kinase type 1, Calmodulin
Authors:Gifford, J.L, Ishida, H, Vogel, H.J.
Deposit date:2010-12-13
Release date:2011-05-18
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Fast methionine-based solution structure determination of calcium-calmodulin complexes.
J.Biomol.Nmr, 50, 2011
2M73
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BU of 2m73 by Molmil
solution structure of the calmodulin-binding domain of plant calcium-ATPase ACA8
Descriptor: Calcium-transporting ATPase 8, plasma membrane-type
Authors:Jamshidiha, M, Ishida, H, Gifford, J.L, Vogel, H.J.
Deposit date:2013-04-16
Release date:2014-04-16
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural characterization of the interaction between a plant calmodulin and three distinct calcium-ATPase pumps
To be Published
3AXM
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BU of 3axm by Molmil
Structure of rice Rubisco in complex with 6PG
Descriptor: 6-PHOSPHOGLUCONIC ACID, MAGNESIUM ION, Ribulose bisphosphate carboxylase large chain, ...
Authors:Matsumura, H, Mizohata, E, Ishida, H, Kogami, A, Ueno, T, Makino, A, Inoue, T, Yokota, A, Mae, T, Kai, Y.
Deposit date:2011-04-11
Release date:2012-04-11
Last modified:2013-06-05
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of rice Rubisco and implications for activation induced by positive effectors NADPH and 6-phosphogluconate
J.Mol.Biol., 422, 2012
3AXK
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BU of 3axk by Molmil
Structure of rice Rubisco in complex with NADP(H)
Descriptor: GLYCEROL, MAGNESIUM ION, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Matsumura, H, Mizohata, E, Ishida, H, Kogami, A, Ueno, T, Makino, A, Inoue, T, Yokota, A, Mae, T, Kai, Y.
Deposit date:2011-04-11
Release date:2012-04-11
Last modified:2013-06-05
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of rice Rubisco and implications for activation induced by positive effectors NADPH and 6-phosphogluconate
J.Mol.Biol., 422, 2012
2ZFD
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BU of 2zfd by Molmil
The crystal structure of plant specific calcium binding protein AtCBL2 in complex with the regulatory domain of AtCIPK14
Descriptor: ACETIC ACID, CALCIUM ION, Calcineurin B-like protein 2, ...
Authors:Akaboshi, M, Hashimoto, H, Ishida, H, Koizumi, N, Sato, M, Shimizu, T.
Deposit date:2007-12-29
Release date:2008-02-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:The crystal structure of plant-specific calcium-binding protein AtCBL2 in complex with the regulatory domain of AtCIPK14
J.Mol.Biol., 377, 2008
5Y3J
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BU of 5y3j by Molmil
Crystal structure of horse TLR9 in complex with two DNAs (CpG DNA and TCGCAC DNA)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DNA (5'-D(*AP*GP*GP*CP*GP*TP*TP*TP*TP*T)-3'), ...
Authors:Ohto, U, Ishida, H, Shimizu, T.
Deposit date:2017-07-29
Release date:2018-04-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Toll-like Receptor 9 Contains Two DNA Binding Sites that Function Cooperatively to Promote Receptor Dimerization and Activation
Immunity, 48, 2018
3WLU
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BU of 3wlu by Molmil
Crystal Structure of human galectin-9 NCRD with Selenolactose
Descriptor: 2-(trimethylsilyl)ethyl 4-O-beta-D-galactopyranosyl-6-Se-methyl-6-seleno-beta-D-glucopyranoside, Galectin-9
Authors:Makyio, H, Suzuki, T, Ando, H, Yamada, Y, Ishida, H, Kiso, M, Wakatsuki, S, Kato, R.
Deposit date:2013-11-14
Release date:2014-11-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Expanded potential of seleno-carbohydrates as a molecular tool for X-ray structural determination of a carbohydrate-protein complex with single/multi-wavelength anomalous dispersion phasing
Bioorg.Med.Chem., 22, 2014
7EFQ
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BU of 7efq by Molmil
Crystal structure of hPPARgamma ligand binding domain complexed with rosiglitazone-based fluorescence probe
Descriptor: (5S)-5-[[4-[2-[[7-(diethylamino)-2-oxidanylidene-chromen-4-yl]-methyl-amino]ethoxy]phenyl]methyl]-1,3-thiazolidine-2,4-dione, Peroxisome proliferator-activated receptor gamma
Authors:Yoshikawa, C, Ishida, H, Ohashi, N, Itoh, T.
Deposit date:2021-03-23
Release date:2021-05-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Synthesis of a Coumarin-Based PPAR gamma Fluorescence Probe for Competitive Binding Assay.
Int J Mol Sci, 22, 2021
3WVM
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BU of 3wvm by Molmil
The 0.88 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with stearic acid
Descriptor: Fatty acid-binding protein, heart, HEXAETHYLENE GLYCOL, ...
Authors:Sugiyama, S, Matsuoka, S, Mizohata, E, Matsuoka, D, Ishida, H, Hirose, M, Kakinouchi, K, Hara, T, Matsumura, H, Murakami, S, Inoue, T, Murata, M.
Deposit date:2014-05-25
Release date:2015-01-28
Last modified:2022-08-24
Method:X-RAY DIFFRACTION (0.88 Å)
Cite:Water-mediated recognition of simple alkyl chains by heart-type fatty-acid-binding protein.
Angew.Chem.Int.Ed.Engl., 54, 2015
3WBG
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BU of 3wbg by Molmil
Structure of the human heart fatty acid-binding protein in complex with 1-anilinonaphtalene-8-sulphonic acid
Descriptor: 8-ANILINO-1-NAPHTHALENE SULFONATE, Fatty acid-binding protein, heart
Authors:Hirose, M, Sugiyama, S, Ishida, H, Niiyama, M, Matsuoka, D, Hara, T, Sato, F, Mizohata, E, Murakami, S, Inoue, T, Matsuoka, S, Murata, M.
Deposit date:2013-05-16
Release date:2013-10-30
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure of the human-heart fatty-acid-binding protein 3 in complex with the fluorescent probe 1-anilinonaphthalene-8-sulphonic acid
J.SYNCHROTRON RADIAT., 20, 2013
3VJL
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BU of 3vjl by Molmil
Crystal structure of human depiptidyl peptidase IV (DPP-4) in complex with a prolylthiazolidine inhibitor #2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Dipeptidyl peptidase 4, ...
Authors:Akahoshi, F, Kishida, H, Miyaguchi, I, Yoshida, T, Ishii, S.
Deposit date:2011-10-24
Release date:2012-10-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.393 Å)
Cite:Discovery and preclinical profile of teneligliptin (3-[(2S,4S)-4-[4-(3-methyl-1-phenyl-1H-pyrazol-5-yl)piperazin-1-yl]pyrrolidin-2-ylcarbonyl]thiazolidine): A highly potent, selective, long-lasting and orally active dipeptidyl peptidase IV inhibitor for the treatment of type 2 diabetes
Bioorg.Med.Chem., 20, 2012
3VJK
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BU of 3vjk by Molmil
Crystal structure of human depiptidyl peptidase IV (DPP-4) in complex with MP-513
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Dipeptidyl peptidase 4, ...
Authors:Akahoshi, F, Kishida, H, Miyaguchi, I, Yoshida, T, Ishii, S.
Deposit date:2011-10-24
Release date:2012-10-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Discovery and preclinical profile of teneligliptin (3-[(2S,4S)-4-[4-(3-methyl-1-phenyl-1H-pyrazol-5-yl)piperazin-1-yl]pyrrolidin-2-ylcarbonyl]thiazolidine): A highly potent, selective, long-lasting and orally active dipeptidyl peptidase IV inhibitor for the treatment of type 2 diabetes
Bioorg.Med.Chem., 20, 2012
8HB0
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BU of 8hb0 by Molmil
Structure of human SGLT2-MAP17 complex with TA1887
Descriptor: (2R,3R,4S,5S,6R)-2-[3-[(4-cyclopropylphenyl)methyl]-4-fluoranyl-indol-1-yl]-6-(hydroxymethyl)oxane-3,4,5-triol, 2-acetamido-2-deoxy-beta-D-glucopyranose, PDZK1-interacting protein 1, ...
Authors:Hiraizumi, M, Kishida, H, Miyaguchi, I, Nureki, O.
Deposit date:2022-10-27
Release date:2023-11-01
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Transport and inhibition mechanism of the human SGLT2-MAP17 glucose transporter.
Nat.Struct.Mol.Biol., 31, 2024

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