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1V2F
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BU of 1v2f by Molmil
Crystal Structure of T.th HB8 Glutamine Aminotransferase complex with 3-phenylpropionate
Descriptor: Glutamine Aminotransferase, HYDROCINNAMIC ACID, PYRIDOXAL-5'-PHOSPHATE
Authors:Goto, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-10-15
Release date:2004-07-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structures of glutamine:phenylpyruvate aminotransferase from Thermus thermophilus HB8: induced fit and substrate recognition
J.BIOL.CHEM., 279, 2004
1V2D
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BU of 1v2d by Molmil
Crystal Structure of T.th HB8 Glutamine Aminotransferase
Descriptor: Glutamine Aminotransferase, PYRIDOXAL-5'-PHOSPHATE
Authors:Goto, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-10-15
Release date:2004-07-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of glutamine:phenylpyruvate aminotransferase from Thermus thermophilus HB8: induced fit and substrate recognition
J.BIOL.CHEM., 279, 2004
1V7C
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BU of 1v7c by Molmil
Crystal structure of threonine synthase from thermus thermophilus hb8 in complex with a substrate analogue
Descriptor: (2E)-2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]-5-PHOSPHONOPENT-2-ENOIC ACID, THREONINE SYNTHASE
Authors:Omi, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-12-16
Release date:2003-12-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of threonine synthase from Thermus thermophilus HB8: conformational change, substrate recognition, and mechanism.
J.Biol.Chem., 278, 2003
1VB3
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BU of 1vb3 by Molmil
Crystal Structure of Threonine Synthase from Escherichia coli
Descriptor: 2-OXO-5-PHOSPHONOPENTANOIC ACID, SULFATE ION, Threonine synthase
Authors:Omi, R.
Deposit date:2004-02-21
Release date:2005-06-21
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of Threonine Synthase from Escherichia coli
To be Published
1V2E
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BU of 1v2e by Molmil
Crystal Structure of T.th HB8 Glutamine Aminotransferase complex with a-keto-g-methylthiobutyrate
Descriptor: 4-(METHYLSULFANYL)-2-OXOBUTANOIC ACID, Glutamine Aminotransferase, PYRIDOXAL-5'-PHOSPHATE
Authors:Goto, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-10-15
Release date:2004-07-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structures of glutamine:phenylpyruvate aminotransferase from Thermus thermophilus HB8: induced fit and substrate recognition
J.BIOL.CHEM., 279, 2004
7QRO
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BU of 7qro by Molmil
Crystal structure of the unconventional kinetochore protein Trypanosoma brucei KKT4 BRCT domain K543A mutant
Descriptor: Trypanosoma brucei KKT4 463-645 K543A
Authors:Ludzia, P, Akiyoshi, B.
Deposit date:2022-01-11
Release date:2022-02-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the unconventional kinetochore protein Trypanosoma brucei KKT4 BRCT domain K543A mutant
To Be Published
1KZK
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BU of 1kzk by Molmil
JE-2147-HIV Protease Complex
Descriptor: (4R)-3-{(2S,3S)-2-hydroxy-3-[(3-hydroxy-2-methylbenzoyl)amino]-4-phenylbutanoyl}-5,5-dimethyl-N-(2-methylbenzyl)-1,3-thiazolidine-4-carboxamide, 1,2-ETHANEDIOL, CHLORIDE ION, ...
Authors:Reiling, K.K, Endres, N.F, Dauber, D.S, Craik, C.S, Stroud, R.M.
Deposit date:2002-02-06
Release date:2002-04-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.09 Å)
Cite:Anisotropic Dynamics of the JE-2147-HIV Protease Complex: Drug Resistance and Thermodynamic Binding Mode Examined in a 1.09 A Structure
Biochemistry, 41, 2002
2AY5
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BU of 2ay5 by Molmil
AROMATIC AMINO ACID AMINOTRANSFERASE WITH 3-INDOLEPROPIONIC ACID
Descriptor: AROMATIC AMINO ACID AMINOTRANSFERASE, INDOLYLPROPIONIC ACID, PYRIDOXAL-5'-PHOSPHATE
Authors:Okamoto, A, Hirotsu, K, Kagamiyama, H.
Deposit date:1998-08-06
Release date:1999-02-02
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The active site of Paracoccus denitrificans aromatic amino acid aminotransferase has contrary properties: flexibility and rigidity.
Biochemistry, 38, 1999
2AY7
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BU of 2ay7 by Molmil
AROMATIC AMINO ACID AMINOTRANSFERASE WITH 4-PHENYLBUTYRIC ACID
Descriptor: 4-PHENYL-BUTANOIC ACID, AROMATIC AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Okamoto, A, Hirotsu, K, Kagamiyama, H.
Deposit date:1998-08-06
Release date:1999-02-02
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The active site of Paracoccus denitrificans aromatic amino acid aminotransferase has contrary properties: flexibility and rigidity.
Biochemistry, 38, 1999
2AY3
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BU of 2ay3 by Molmil
AROMATIC AMINO ACID AMINOTRANSFERASE WITH 3-(3,4-DIMETHOXYPHENYL)PROPIONIC ACID
Descriptor: 3-(3,4-DIMETHOXYPHENYL)PROPIONIC ACID, AROMATIC AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Okamoto, A, Hirotsu, K, Kagamiyama, H.
Deposit date:1998-08-06
Release date:1999-02-02
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The active site of Paracoccus denitrificans aromatic amino acid aminotransferase has contrary properties: flexibility and rigidity.
Biochemistry, 38, 1999
2AY2
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BU of 2ay2 by Molmil
AROMATIC AMINO ACID AMINOTRANSFERASE WITH CYCLOHEXANE PROPIONIC ACID
Descriptor: AROMATIC AMINO ACID AMINOTRANSFERASE, CYCLOHEXANE PROPIONIC ACID, PYRIDOXAL-5'-PHOSPHATE
Authors:Okamoto, A, Hirotsu, K, Kagamiyama, H.
Deposit date:1998-08-06
Release date:1999-02-02
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The active site of Paracoccus denitrificans aromatic amino acid aminotransferase has contrary properties: flexibility and rigidity.
Biochemistry, 38, 1999
2AY9
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BU of 2ay9 by Molmil
AROMATIC AMINO ACID AMINOTRANSFERASE WITH 5-PHENYLVALERIC ACID
Descriptor: 5-PHENYLVALERIC ACID, AROMATIC AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Okamoto, A, Hirotsu, K, Kagamiyama, H.
Deposit date:1998-08-06
Release date:1999-02-02
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The active site of Paracoccus denitrificans aromatic amino acid aminotransferase has contrary properties: flexibility and rigidity.
Biochemistry, 38, 1999
2AY8
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BU of 2ay8 by Molmil
AROMATIC AMINO ACID AMINOTRANSFERASE WITH 4-(2-THIENYL)BUTYRIC ACID
Descriptor: 4-(2-THIENYL)BUTYRIC ACID, AROMATIC AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Okamoto, A, Hirotsu, K, Kagamiyama, H.
Deposit date:1998-08-06
Release date:1999-02-02
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The active site of Paracoccus denitrificans aromatic amino acid aminotransferase has contrary properties: flexibility and rigidity.
Biochemistry, 38, 1999
2AY6
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BU of 2ay6 by Molmil
AROMATIC AMINO ACID AMINOTRANSFERASE WITH 3-INDOLEBUTYRIC ACID
Descriptor: 3-INDOLEBUTYRIC ACID, AROMATIC AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Okamoto, A, Hirotsu, K, Kagamiyama, H.
Deposit date:1998-08-06
Release date:1999-02-02
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The active site of Paracoccus denitrificans aromatic amino acid aminotransferase has contrary properties: flexibility and rigidity.
Biochemistry, 38, 1999
2AY1
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BU of 2ay1 by Molmil
AROMATIC AMINO ACID AMINOTRANSFERASE WITH 4-AMINOHYDROCINNAMIC ACID
Descriptor: 4-AMINOHYDROCINNAMIC ACID, AROMATIC AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Okamoto, A, Hirotsu, K, Kagamiyama, H.
Deposit date:1998-08-06
Release date:1999-02-02
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The active site of Paracoccus denitrificans aromatic amino acid aminotransferase has contrary properties: flexibility and rigidity.
Biochemistry, 38, 1999
2AY4
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BU of 2ay4 by Molmil
AROMATIC AMINO ACID AMINOTRANSFERASE WITH 3-(P-TOLYL)PROPIONIC ACID
Descriptor: 3-(P-TOLYL)PROPIONIC ACID, AROMATIC AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Okamoto, A, Hirotsu, K, Kagamiyama, H.
Deposit date:1998-08-06
Release date:1999-02-02
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The active site of Paracoccus denitrificans aromatic amino acid aminotransferase has contrary properties: flexibility and rigidity.
Biochemistry, 38, 1999
5Z5E
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BU of 5z5e by Molmil
Crystal structure of the Glycyl-tRNA synthetase (GlyRS) in Nanoarchaeum equitans
Descriptor: GLYCEROL, NEQ417, SULFATE ION
Authors:Noguchi, H, Park, S.Y, Tamura, K.
Deposit date:2018-01-18
Release date:2019-01-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.098 Å)
Cite:Glycyl-tRNA synthetase from Nanoarchaeum equitans: The first crystal structure of archaeal GlyRS and analysis of its tRNA glycylation.
Biochem.Biophys.Res.Commun., 511, 2019
7JKV
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BU of 7jkv by Molmil
Crystal Structure of SARS-CoV-2 main protease in complex with an inhibitor GRL-2420
Descriptor: 3C-like proteinase, N-[(2S)-1-({(1S,2S)-1-(1,3-benzothiazol-2-yl)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}amino)-4-methyl-1-oxopentan-2-yl]-4-methoxy-1H-indole-2-carboxamide, PENTAETHYLENE GLYCOL
Authors:Bulut, H, Hattori, S.I, Das, D, Murayama, K, Mitsuya, H.
Deposit date:2020-07-29
Release date:2020-09-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:A small molecule compound with an indole moiety inhibits the main protease of SARS-CoV-2 and blocks virus replication.
Nat Commun, 12, 2021
1WYC
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BU of 1wyc by Molmil
Structure of 6-aminohexanoate-dimer hydrolase, DN mutant
Descriptor: 6-aminohexanoate-dimer hydrolase
Authors:Negoro, S, Ohki, T, Shibata, N, Mizuno, N, Wakitani, Y, Tsurukame, J, Matsumoto, K, Kawamoto, I, Takeo, M, Higuchi, Y.
Deposit date:2005-02-09
Release date:2006-02-21
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Nylon-oligomer degrading enzyme/substrate complex: catalytic mechanism of 6-aminohexanoate-dimer hydrolase
J.Mol.Biol., 370, 2007
1X2A
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BU of 1x2a by Molmil
Crystal Structure of e.coli AspAT complexed with N-phosphopyridoxyl-D-glutamic acid
Descriptor: Aspartate aminotransferase, N-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)-D-GLUTAMIC ACID
Authors:Goto, M.
Deposit date:2005-04-21
Release date:2005-06-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Binding of C5-dicarboxylic substrate to aspartate aminotransferase: implications for the conformational change at the transaldimination step.
Biochemistry, 44, 2005
1X28
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BU of 1x28 by Molmil
Crystal Structure of e.coli AspAT complexed with N-phosphopyridoxyl-L-glutamic acid
Descriptor: Aspartate aminotransferase, N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)-L-glutamic acid
Authors:Goto, M.
Deposit date:2005-04-21
Release date:2005-06-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Binding of C5-dicarboxylic substrate to aspartate aminotransferase: implications for the conformational change at the transaldimination step.
Biochemistry, 44, 2005
1X29
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BU of 1x29 by Molmil
Crystal Structure of e.coli AspAT complexed with N-phosphopyridoxyl-2-methyl-L-glutamic acid
Descriptor: Aspartate aminotransferase, N-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)-2-METHYL-L-GLUTAMIC ACID
Authors:Goto, M.
Deposit date:2005-04-21
Release date:2005-06-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Binding of C5-dicarboxylic substrate to aspartate aminotransferase: implications for the conformational change at the transaldimination step.
Biochemistry, 44, 2005
5XDF
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BU of 5xdf by Molmil
Homoserine dehydrogenase from Thermus thermophilus HB8 complexed with HSE
Descriptor: FORMIC ACID, Homoserine dehydrogenase, L-HOMOSERINE, ...
Authors:Akai, S, Miyahara, I.
Deposit date:2017-03-28
Release date:2017-04-26
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystallographic study of homoserine dehydrogenase from Thermus thermophilus HB8
To Be Published
2Z5E
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BU of 2z5e by Molmil
Crystal Structure of Proteasome Assembling Chaperone 3
Descriptor: Proteasome Assembling Chaperone 3
Authors:Okamoto, K, Kurimoto, E, Sakata, E, Suzuki, A, Yamane, T, Hirano, Y, Murata, S, Tanaka, K, Kato, K.
Deposit date:2007-07-06
Release date:2008-02-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a chaperone complex that contributes to the assembly of yeast 20S proteasomes
Nat.Struct.Mol.Biol., 15, 2008
3A9Z
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BU of 3a9z by Molmil
Crystal structure of ras selenocysteine lyase in complex with selenopropionate
Descriptor: 3-selanylpropanoic acid, PHOSPHATE ION, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Omi, R, Hirotsu, K.
Deposit date:2009-11-09
Release date:2010-03-16
Last modified:2013-10-30
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Reaction mechanism and molecular basis for selenium/sulfur discrimination of selenocysteine lyase.
J.Biol.Chem., 285, 2010

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