Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1PCK
DownloadVisualize
BU of 1pck by Molmil
Aquifex aeolicus KDO8PS in complex with Z-methyl-PEP
Descriptor: 2-(PHOSPHONOOXY)BUTANOIC ACID, 2-dehydro-3-deoxyphosphooctonate aldolase, CADMIUM ION, ...
Authors:Wang, J, Xu, X, Grison, C, Petek, S, Coutrot, P, Birck, M, Woodard, R.W, Gatti, D.L.
Deposit date:2003-05-16
Release date:2004-02-17
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure-Based Design of Novel Inhibitors of 3-Deoxy-D-manno-octulosonate 8-Phosphate Synthase.
DRUG DES.DISCOVERY, 18, 2003
1PCW
DownloadVisualize
BU of 1pcw by Molmil
Aquifex aeolicus KDO8PS in complex with cadmium and APP, a bisubstrate inhibitor
Descriptor: 1-DEOXY-6-O-PHOSPHONO-1-[(PHOSPHONOMETHYL)AMINO]-L-THREO-HEXITOL, 2-dehydro-3-deoxyphosphooctonate aldolase, CADMIUM ION
Authors:Xu, X, Wang, J, Grison, C, Petek, S, Coutrot, P, Birck, M, Woodard, R.W, Gatti, D.L.
Deposit date:2003-05-17
Release date:2004-02-17
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure-Based Design of Novel Inhibitors of 3-Deoxy-D-manno-octulosonate 8-Phosphate Synthase.
Drug DES.DISCOVERY, 18, 2003
2NWS
DownloadVisualize
BU of 2nws by Molmil
Structural and mechanistic changes along an engineered path from metallo to non-metallo KDO8P synthase
Descriptor: 2-dehydro-3-deoxyphosphooctonate aldolase, ARABINOSE-5-PHOSPHATE, PHOSPHOENOLPYRUVATE
Authors:Kona, F, Xu, X, Martin, P, Kuzmic, P, Gatti, D.L.
Deposit date:2006-11-16
Release date:2007-04-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and Mechanistic Changes along an Engineered Path from Metallo to Nonmetallo 3-Deoxy-d-manno-octulosonate 8-Phosphate Synthases.
Biochemistry, 46, 2007
2NXH
DownloadVisualize
BU of 2nxh by Molmil
Structural and mechanistic changes along an engineered path from metallo to non-metallo KDO8P synthase.
Descriptor: 2-dehydro-3-deoxyphosphooctonate aldolase, PHOSPHATE ION, PHOSPHOENOLPYRUVATE
Authors:Kona, F, Xu, X, Martin, P, Kuzmic, P, Gatti, D.L.
Deposit date:2006-11-17
Release date:2007-04-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Structural and Mechanistic Changes along an Engineered Path from Metallo to Nonmetallo 3-Deoxy-d-manno-octulosonate 8-Phosphate Synthases.
Biochemistry, 46, 2007
2NWR
DownloadVisualize
BU of 2nwr by Molmil
Crystal structure of C11N mutant of KDO8P Synthase in complex with PEP
Descriptor: 2-dehydro-3-deoxyphosphooctonate aldolase, PHOSPHATE ION, PHOSPHOENOLPYRUVATE
Authors:Kona, F, Xu, X, Martin, P, Kuzmic, P, Gatti, D.L.
Deposit date:2006-11-16
Release date:2007-04-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural and Mechanistic Changes along an Engineered Path from Metallo to Nonmetallo 3-Deoxy-d-manno-octulosonate 8-Phosphate Synthases.
Biochemistry, 46, 2007
2NXI
DownloadVisualize
BU of 2nxi by Molmil
Structural and mechanistic changes along an engineered path from metallo to non-metallo KDO8P synthase.
Descriptor: 2-dehydro-3-deoxyphosphooctonate aldolase, PHOSPHATE ION, PHOSPHOENOLPYRUVATE
Authors:Kona, F, Xu, X, Martin, P, Kuzmic, P, Gatti, D.L.
Deposit date:2006-11-17
Release date:2007-07-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and mechanistic changes along an engineered path from metallo to nonmetallo 3-deoxy-D-manno-octulosonate 8-phosphate synthases
Biochemistry, 46, 2007
2NX1
DownloadVisualize
BU of 2nx1 by Molmil
Structural and mechanistic changes along an engineered path from metallo to non-metallo KDO8P synthase
Descriptor: 2-dehydro-3-deoxyphosphooctonate aldolase, 5-O-phosphono-beta-D-ribofuranose, PHOSPHOENOLPYRUVATE
Authors:Kona, F, Xu, X, Martin, P, Kuzmic, P, Gatti, D.L.
Deposit date:2006-11-16
Release date:2007-04-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and Mechanistic Changes along an Engineered Path from Metallo to Nonmetallo 3-Deoxy-d-manno-octulosonate 8-Phosphate Synthases.
Biochemistry, 46, 2007
2NX3
DownloadVisualize
BU of 2nx3 by Molmil
Structural and mechanistic changes along an engineered path from metallo to non-metallo KDO8P synthase
Descriptor: (2R,4R,5R,6R,7R)-2,4,5,6,7-PENTAHYDROXY-2,8-BIS(PHOSPHONOOXY)OCTANOIC ACID, 2-dehydro-3-deoxyphosphooctonate aldolase, ARABINOSE-5-PHOSPHATE, ...
Authors:Kona, F, Xu, X, Martin, P, Kuzmic, P, Gatti, D.L.
Deposit date:2006-11-16
Release date:2007-04-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and Mechanistic Changes along an Engineered Path from Metallo to Nonmetallo 3-Deoxy-d-manno-octulosonate 8-Phosphate Synthases.
Biochemistry, 46, 2007
2NXG
DownloadVisualize
BU of 2nxg by Molmil
Structural and mechanistic changes along an engineered path from metallo to non-metallo KDO8P synthase.
Descriptor: (2R,4R,5R,6R,7R)-2,4,5,6,7-PENTAHYDROXY-2,8-BIS(PHOSPHONOOXY)OCTANOIC ACID, 2-dehydro-3-deoxyphosphooctonate aldolase, ARABINOSE-5-PHOSPHATE, ...
Authors:Kona, F, Xu, X, Martin, P, Kuzmic, P, Gatti, D.L.
Deposit date:2006-11-17
Release date:2007-04-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural and Mechanistic Changes along an Engineered Path from Metallo to Nonmetallo 3-Deoxy-d-manno-octulosonate 8-Phosphate Synthases.
Biochemistry, 46, 2007
2P4F
DownloadVisualize
BU of 2p4f by Molmil
Crystal Structure of Atp11 functional domain from Candida Glabrata
Descriptor: HEXAETHYLENE GLYCOL, Similar to sp|P32453 Saccharomyces cerevisiae YNL315c ATP11
Authors:Ludlam, A.V, Brunzelle, J.S, Gatti, D.L, Ackerman, S.H.
Deposit date:2007-03-12
Release date:2008-03-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal Structure of Atp11 functional domain from Candida Glabrata
To be Published
2P4X
DownloadVisualize
BU of 2p4x by Molmil
Crystal Structure of Atp12 from Paracoccus Denitrificans
Descriptor: ATP12 ATPase
Authors:Ludlam, A.V, Brunzelle, J.S, Gatti, D.L, Ackerman, S.H.
Deposit date:2007-03-13
Release date:2008-03-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of Atp12 from Paracoccus Denitrificans
To be Published
1IHU
DownloadVisualize
BU of 1ihu by Molmil
CRYSTAL STRUCTURE OF THE ESCHERICHIA COLI ARSENITE-TRANSLOCATING ATPASE IN COMPLEX WITH MG-ADP-ALF3
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, ARSENICAL PUMP-DRIVING ATPASE, ...
Authors:Zhou, T, Radaev, S, Rosen, B.P, Gatti, D.L.
Deposit date:2001-04-20
Release date:2001-09-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Conformational changes in four regions of the Escherichia coli ArsA ATPase link ATP hydrolysis to ion translocation.
J.Biol.Chem., 276, 2001
1F48
DownloadVisualize
BU of 1f48 by Molmil
CRYSTAL STRUCTURE OF THE ESCHERICHIA COLI ARSENITE-TRANSLOCATING ATPASE
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ANTIMONY (III) ION, ARSENITE-TRANSLOCATING ATPASE, ...
Authors:Zhou, T, Radaev, S, Rosen, B.P, Gatti, D.L.
Deposit date:2000-06-07
Release date:2000-09-13
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the ArsA ATPase: the catalytic subunit of a heavy metal resistance pump.
EMBO J., 19, 2000
1JCX
DownloadVisualize
BU of 1jcx by Molmil
Aquifex aeolicus KDO8P synthase in complex with API and Cadmium
Descriptor: 2-DEHYDRO-3-DEOXYPHOSPHOOCTONATE ALDOLASE, CADMIUM ION, {[(2,2-DIHYDROXY-ETHYL)-(2,3,4,5-TETRAHYDROXY-6-PHOSPHONOOXY-HEXYL)-AMINO]-METHYL}-PHOSPHONIC ACID
Authors:Wang, J, Duewel, H.S, Woodard, R.W, Gatti, D.L.
Deposit date:2001-06-11
Release date:2002-01-16
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structures of Aquifex aeolicus KDO8P synthase in complex with R5P and PEP, and with a bisubstrate inhibitor: role of active site water in catalysis.
Biochemistry, 40, 2001
1D9E
DownloadVisualize
BU of 1d9e by Molmil
STRUCTURE OF E. COLI KDO8P SYNTHASE
Descriptor: 3-DEOXY-D-MANNO-OCTULOSONATE 8-PHOSPHATE SYNTHASE, SULFATE ION
Authors:Radaev, S, Dastidar, P, Patel, M, Woodard, R.W, Gatti, D.L.
Deposit date:1999-10-27
Release date:2000-05-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure and mechanism of 3-deoxy-D-manno-octulosonate 8-phosphate synthase.
J.Biol.Chem., 275, 2000
1K0L
DownloadVisualize
BU of 1k0l by Molmil
Pseudomonas aeruginosa phbh R220Q free of p-OHB
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, P-HYDROXYBENZOATE HYDROXYLASE, SULFATE ION, ...
Authors:Wang, J, Ortiz-Maldonado, M, Entsch, B, Ballou, D, Gatti, D.L.
Deposit date:2001-09-19
Release date:2002-02-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Protein and ligand dynamics in 4-hydroxybenzoate hydroxylase.
Proc.Natl.Acad.Sci.USA, 99, 2002
1JZW
DownloadVisualize
BU of 1jzw by Molmil
Arsenate Reductase + Sodium Arsenate From E. coli
Descriptor: ARSENATE REDUCTASE, CESIUM ION, SULFATE ION, ...
Authors:Martin, P, DeMel, S, Shi, J, Gladysheva, T, Gatti, D.L, Rosen, B.P, Edwards, B.F.
Deposit date:2001-09-17
Release date:2001-11-28
Last modified:2018-04-04
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Insights into the structure, solvation, and mechanism of ArsC arsenate reductase, a novel arsenic detoxification enzyme.
Structure, 9, 2001
1II9
DownloadVisualize
BU of 1ii9 by Molmil
CRYSTAL STRUCTURE OF THE ESCHERICHIA COLI ARSENITE-TRANSLOCATING ATPASE IN COMPLEX WITH AMP-PNP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ARSENICAL PUMP-DRIVING ATPASE, CADMIUM ION, ...
Authors:Zhou, T, Radaev, S, Gatti, D.L, Rosen, B.P.
Deposit date:2001-04-21
Release date:2001-09-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Conformational changes in four regions of the Escherichia coli ArsA ATPase link ATP hydrolysis to ion translocation.
J.Biol.Chem., 276, 2001
1FWS
DownloadVisualize
BU of 1fws by Molmil
AQUIFEX AEOLICUS KDO8P SYNTHASE IN COMPLEX WITH PEP AND CADMIUM
Descriptor: 2-DEHYDRO-3-DEOXYPHOSPHOOCTONATE ALDOLASE, CADMIUM ION, PHOSPHATE ION, ...
Authors:Duewel, H.S, Radaev, S, Wang, J, Woodard, R.W, Gatti, D.L.
Deposit date:2000-09-24
Release date:2001-04-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Electronic structure of the metal center in the Cd(2+), Zn(2+), and Cu(2+) substituted forms of KDO8P synthase: implications for catalysis.
Biochemistry, 48, 2009
1FXP
DownloadVisualize
BU of 1fxp by Molmil
AQUIFEX AEOLICUS KDO8P SYNTHASE IN COMPLEX WITH CADMIUM
Descriptor: 2-DEHYDRO-3-DEOXYPHOSPHOOCTONATE ALDOLASE, CADMIUM ION, PHOSPHATE ION
Authors:Duewel, H.S, Radaev, S, Wang, J, Woodard, R.W, Gatti, D.L.
Deposit date:2000-09-26
Release date:2001-04-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Substrate and metal complexes of 3-deoxy-D-manno-octulosonate-8-phosphate synthase from Aquifex aeolicus at 1.9-A resolution. Implications for the condensation mechanism.
J.Biol.Chem., 276, 2001
1JCY
DownloadVisualize
BU of 1jcy by Molmil
Aquifex aeolicus KDO8P synthase in complex with R5P, PEP and Cadmium
Descriptor: 2-DEHYDRO-3-DEOXYPHOSPHOOCTONATE ALDOLASE, CADMIUM ION, PHOSPHATE ION, ...
Authors:Wang, J, Duewel, H.S, Woodard, R.W, Gatti, D.L.
Deposit date:2001-06-11
Release date:2002-01-16
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of Aquifex aeolicus KDO8P synthase in complex with R5P and PEP, and with a bisubstrate inhibitor: role of active site water in catalysis.
Biochemistry, 40, 2001
1FX6
DownloadVisualize
BU of 1fx6 by Molmil
AQUIFEX AEOLICUS KDO8P SYNTHASE
Descriptor: 2-DEHYDRO-3-DEOXYPHOSPHOOCTONATE ALDOLASE, PHOSPHATE ION
Authors:Duewel, H.S, Radaev, S, Wang, J, Woodard, R.W, Gatti, D.L.
Deposit date:2000-09-25
Release date:2001-04-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Substrate and metal complexes of 3-deoxy-D-manno-octulosonate-8-phosphate synthase from Aquifex aeolicus at 1.9-A resolution. Implications for the condensation mechanism.
J.Biol.Chem., 276, 2001
1FY6
DownloadVisualize
BU of 1fy6 by Molmil
AQUIFEX AEOLICUS KDO8P SYNTHASE IN COMPLEX WITH CADMIUM AND A5P
Descriptor: 2-DEHYDRO-3-DEOXYPHOSPHOOCTONATE ALDOLASE, ARABINOSE-5-PHOSPHATE, CADMIUM ION, ...
Authors:Duewel, H.S, Radaev, S, Wang, J, Woodard, R.W, Gatti, D.L.
Deposit date:2000-09-28
Release date:2001-04-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Substrate and metal complexes of 3-deoxy-D-manno-octulosonate-8-phosphate synthase from Aquifex aeolicus at 1.9-A resolution. Implications for the condensation mechanism.
J.Biol.Chem., 276, 2001
1FXQ
DownloadVisualize
BU of 1fxq by Molmil
AQUIFEX AEOLICUS KDO8P SYNTHASE IN COMPLEX WITH PEP AND A5P
Descriptor: 2-DEHYDRO-3-DEOXYPHOSPHOOCTONATE ALDOLASE, ARABINOSE-5-PHOSPHATE, PHOSPHOENOLPYRUVATE
Authors:Duewel, H.S, Radaev, S, Wang, J, Woodard, R.W, Gatti, D.L.
Deposit date:2000-09-26
Release date:2001-04-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Substrate and metal complexes of 3-deoxy-D-manno-octulosonate-8-phosphate synthase from Aquifex aeolicus at 1.9-A resolution. Implications for the condensation mechanism.
J.Biol.Chem., 276, 2001
1K0I
DownloadVisualize
BU of 1k0i by Molmil
Pseudomonas aeruginosa phbh R220Q in complex with 100mM PHB
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, P-HYDROXYBENZOATE HYDROXYLASE, P-HYDROXYBENZOIC ACID, ...
Authors:Wang, J, Ortiz-Maldonado, M, Entsch, B, Ballou, D, Gatti, D.L.
Deposit date:2001-09-19
Release date:2002-02-27
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Protein and ligand dynamics in 4-hydroxybenzoate hydroxylase.
Proc.Natl.Acad.Sci.USA, 99, 2002

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon