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1F75
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CRYSTAL STRUCTURE OF UNDECAPRENYL DIPHOSPHATE SYNTHASE FROM MICROCOCCUS LUTEUS B-P 26
分子名称: SULFATE ION, UNDECAPRENYL PYROPHOSPHATE SYNTHETASE
著者Fujihashi, M, Zhang, Y.-W, Higuchi, Y, Li, X.-Y, Koyama, T, Miki, K.
登録日2000-06-26
公開日2001-03-28
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of cis-prenyl chain elongating enzyme, undecaprenyl diphosphate synthase.
Proc.Natl.Acad.Sci.USA, 98, 2001
1IUC
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Fucose-specific lectin from Aleuria aurantia with three ligands
分子名称: Fucose-specific lectin, SULFATE ION, alpha-L-fucopyranose, ...
著者Fujihashi, M, Peapus, D.H, Kamiya, N, Nagata, Y, Miki, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-03-01
公開日2003-09-30
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Crystal Structure of Fucose-Specific Lectin from Aleuria aurantia Binding Ligands at Three of Its Five Sugar Recognition Sites
Biochemistry, 42, 2003
1IUB
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Fucose-specific lectin from Aleuria aurantia (Hg-derivative form)
分子名称: CHLORIDE ION, Fucose-specific lectin, MERCURY (II) ION, ...
著者Fujihashi, M, Peapus, D.H, Kamiya, N, Nagata, Y, Miki, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-03-01
公開日2003-09-30
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Crystal Structure of Fucose-Specific Lectin from Aleuria aurantia Binding Ligands at Three of Its Five Sugar Recognition Sites
Biochemistry, 42, 2003
2E0I
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Crystal structure of archaeal photolyase from Sulfolobus tokodaii with two FAD molecules: Implication of a novel light-harvesting cofactor
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 432aa long hypothetical deoxyribodipyrimidine photolyase, FLAVIN-ADENINE DINUCLEOTIDE
著者Fujihashi, M, Numoto, N, Kobayashi, Y, Mizushima, A, Tsujimura, M, Nakamura, A, Kawarabayashi, Y, Miki, K.
登録日2006-10-10
公開日2006-11-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal Structure of Archaeal Photolyase from Sulfolobus tokodaii with Two FAD Molecules: Implication of a Novel Light-harvesting Cofactor
J.Mol.Biol., 365, 2007
5YO8
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Crystal structure of beta-C25/C30/C35-prene synthase
分子名称: Tetraprenyl-beta-curcumene synthase
著者Fujihashi, M, Miki, K.
登録日2017-10-27
公開日2018-05-09
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Crystal structure and functional analysis of large-terpene synthases belonging to a newly found subclass.
Chem Sci, 9, 2018
2ZZ6
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Covalent complex of orotidine monophosphate decarboxylase from M. thermoautotrophicum with 6-azido-UMP
分子名称: 6-azidouridine 5'-(dihydrogen phosphate), GLYCEROL, Orotidine 5'-phosphate decarboxylase
著者Fujihashi, M, Pai, E.F.
登録日2009-02-05
公開日2009-03-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Structural characterization of the molecular events during a slow substrate-product transition in orotidine 5'-monophosphate decarboxylase
J.Mol.Biol., 387, 2009
2ZZ3
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Covalent complex of orotidine monophosphate decarboxylase D70A mutant from M. thermoautotrophicus with 6-cyano-UMP
分子名称: 6-cyanouridine 5'-phosphate, GLYCEROL, Orotidine 5'-phosphate decarboxylase
著者Fujihashi, M, Pai, E.F.
登録日2009-02-05
公開日2009-03-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural characterization of the molecular events during a slow substrate-product transition in orotidine 5'-monophosphate decarboxylase
J.Mol.Biol., 387, 2009
2ZZ5
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Orotidine Monophosphate Deacarboxylase D70A/K72A double mutant from M. thermoautotrophicum complexed with 6- cyano-UMP
分子名称: 6-cyanouridine 5'-phosphate, Orotidine 5'-phosphate decarboxylase
著者Fujihashi, M, Pai, E.F.
登録日2009-02-05
公開日2009-03-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Structural characterization of the molecular events during a slow substrate-product transition in orotidine 5'-monophosphate decarboxylase
J.Mol.Biol., 387, 2009
2ZZ4
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Covalent complex of orotidine monophosphate decarboxylase D75N mutant from M. thermoautotrophicum with 6-cyano-UMP
分子名称: 6-cyanouridine 5'-phosphate, GLYCEROL, Orotidine 5'-phosphate decarboxylase
著者Fujihashi, M, Pai, E.F.
登録日2009-02-05
公開日2009-03-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Structural characterization of the molecular events during a slow substrate-product transition in orotidine 5'-monophosphate decarboxylase
J.Mol.Biol., 387, 2009
2ZZ1
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Snapshot of the reaction from 6-CN-UMP to BMP catalyzed by Orotidine Monophosphate Deacarboxylase from M. thermoautotrophicum
分子名称: 6-HYDROXYURIDINE-5'-PHOSPHATE, 6-cyanouridine 5'-phosphate, GLYCEROL, ...
著者Fujihashi, M, Pai, E.F.
登録日2009-02-05
公開日2009-03-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Structural characterization of the molecular events during a slow substrate-product transition in orotidine 5'-monophosphate decarboxylase
J.Mol.Biol., 387, 2009
2ZZ2
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Orotidine Monophosphate Decarboxylase K72A mutant from M. thermoautotrophicum complexed with 6-cyano-UMP
分子名称: 6-cyanouridine 5'-phosphate, GLYCEROL, Orotidine 5'-phosphate decarboxylase
著者Fujihashi, M, Pai, E.F.
登録日2009-02-05
公開日2009-03-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Structural characterization of the molecular events during a slow substrate-product transition in orotidine 5'-monophosphate decarboxylase
J.Mol.Biol., 387, 2009
2ZZ7
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Orotidine Monophosphate Decarboxylase K72A mutant complexed with BMP (produced from 6-Iodo-UMP)
分子名称: 6-HYDROXYURIDINE-5'-PHOSPHATE, GLYCEROL, Orotidine 5'-phosphate decarboxylase
著者Fujihashi, M, Pai, E.F.
登録日2009-02-05
公開日2009-03-24
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Structural characterization of the molecular events during a slow substrate-product transition in orotidine 5'-monophosphate decarboxylase
J.Mol.Biol., 387, 2009
3WK3
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Orotidine 5'-monophosphate decarboxylase K72A mutant from M. thermoautotrophicus complexed with orotidine 5'-monophosphate ethyl ester
分子名称: 6-(ethoxycarbonyl)uridine 5'-(dihydrogen phosphate), GLYCEROL, Orotidine 5'-phosphate decarboxylase
著者Fujihashi, M, Pai, E.F, Miki, K.
登録日2013-10-17
公開日2013-12-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.26 Å)
主引用文献Substrate distortion contributes to the catalysis of orotidine 5'-monophosphate decarboxylase.
J.Am.Chem.Soc., 135, 2013
3WK0
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Wild-type orotidine 5'-monophosphate decarboxylase from M. thermoautotrophicus complexed with orotidine 5'-monophosphate methyl ester
分子名称: 6-(methoxycarbonyl)uridine 5'-(dihydrogen phosphate), GLYCEROL, Orotidine 5'-phosphate decarboxylase
著者Fujihashi, M, Pai, E.F, Miki, K.
登録日2013-10-17
公開日2013-12-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.41 Å)
主引用文献Substrate distortion contributes to the catalysis of orotidine 5'-monophosphate decarboxylase.
J.Am.Chem.Soc., 135, 2013
3WJW
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BU of 3wjw by Molmil
Wild-type orotidine 5'-monophosphate decarboxylase from M. thermoautotrophicus complexed with 6-methyl-UMP
分子名称: 6-methyluridine 5'-(dihydrogen phosphate), Orotidine 5'-phosphate decarboxylase
著者Fujihashi, M, Kuroda, S, Pai, E.F, Miki, K.
登録日2013-10-17
公開日2013-12-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Substrate distortion contributes to the catalysis of orotidine 5'-monophosphate decarboxylase.
J.Am.Chem.Soc., 135, 2013
3WJX
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Wild-type orotidine 5'-monophosphate decarboxylase from M. thermoautotrophicus complexed with 6-amino-UMP
分子名称: 6-AMINOURIDINE 5'-MONOPHOSPHATE, GLYCEROL, Orotidine 5'-phosphate decarboxylase
著者Fujihashi, M, Kuroda, S, Pai, E.F, Miki, K.
登録日2013-10-17
公開日2013-12-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.23 Å)
主引用文献Substrate distortion contributes to the catalysis of orotidine 5'-monophosphate decarboxylase.
J.Am.Chem.Soc., 135, 2013
3WJY
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Orotidine 5'-monophosphate decarboxylase K72A mutant from M. thermoautotrophicus complexed with 6-amino-UMP
分子名称: 6-AMINOURIDINE 5'-MONOPHOSPHATE, GLYCEROL, Orotidine 5'-phosphate decarboxylase
著者Fujihashi, M, Pai, E.F, Miki, K.
登録日2013-10-17
公開日2013-12-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Substrate distortion contributes to the catalysis of orotidine 5'-monophosphate decarboxylase.
J.Am.Chem.Soc., 135, 2013
3WK1
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Wild-type orotidine 5'-monophosphate decarboxylase from M. thermoautotrophicus complexed with orotidine 5'-monophosphate ethyl ester
分子名称: 6-(ethoxycarbonyl)uridine 5'-(dihydrogen phosphate), GLYCEROL, Orotidine 5'-phosphate decarboxylase
著者Fujihashi, M, Pai, E.F, Miki, K.
登録日2013-10-17
公開日2013-12-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Substrate distortion contributes to the catalysis of orotidine 5'-monophosphate decarboxylase.
J.Am.Chem.Soc., 135, 2013
3WJZ
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Orotidine 5'-monophosphate decarboxylase D75N mutant from M. thermoautotrophicus complexed with 6-amino-UMP
分子名称: 6-AMINOURIDINE 5'-MONOPHOSPHATE, CHLORIDE ION, GLYCEROL, ...
著者Fujihashi, M, Pai, E.F, Miki, K.
登録日2013-10-17
公開日2013-12-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献Substrate distortion contributes to the catalysis of orotidine 5'-monophosphate decarboxylase.
J.Am.Chem.Soc., 135, 2013
3WK2
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Orotidine 5'-monophosphate decarboxylase K72A mutant from M. thermoautotrophicus complexed with orotidine 5'-monophosphate methyl ester
分子名称: 6-(methoxycarbonyl)uridine 5'-(dihydrogen phosphate), GLYCEROL, Orotidine 5'-phosphate decarboxylase
著者Fujihashi, M, Pai, E.F, Miki, K.
登録日2013-10-17
公開日2013-12-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Substrate distortion contributes to the catalysis of orotidine 5'-monophosphate decarboxylase.
J.Am.Chem.Soc., 135, 2013
1X1Z
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Orotidine 5'-monophosphate decarboxylase (odcase) complexed with BMP (produced from 6-cyanoump)
分子名称: 6-HYDROXYURIDINE-5'-PHOSPHATE, GLYCEROL, Orotidine 5'-phosphate decarboxylase
著者Fujihashi, M, Bello, A.M, Poduch, E, Wei, L, Annedi, S.C, Pai, E.F, Kotra, L.P.
登録日2005-04-15
公開日2005-12-06
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献An unprecedented twist to ODCase catalytic activity
J.Am.Chem.Soc., 127, 2005
3W07
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Atomic resolution structure of orotidine 5'-monophosphate decarboxylase from Methanothermobacter thermoautotrophicus bound with UMP.
分子名称: GLYCEROL, Orotidine 5'-phosphate decarboxylase, URIDINE-5'-MONOPHOSPHATE
著者Fujihashi, M, Pai, E.F, Miki, K.
登録日2012-10-22
公開日2013-02-20
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.03 Å)
主引用文献Atomic resolution structure of the orotidine 5'-monophosphate decarboxylase product complex combined with surface plasmon resonance analysis: implications for the catalytic mechanism.
J.Biol.Chem., 288, 2013
3WHB
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Crystal structure of FadR from Bacillus subtilis, a transcriptional regulator involved in the regulation of fatty acid degradation
分子名称: DODECYL-COA, Fatty acid metabolism regulator protein
著者Fujihashi, M, Nakatani, T, Miki, K.
登録日2013-08-23
公開日2014-03-19
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural characterization of a ligand-bound form of Bacillus subtilis FadR involved in the regulation of fatty acid degradation.
Proteins, 82, 2014
3WHC
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Crystal structure of a transcriptional regulator FadR from Bacillus subtilis in complex with stearoyl-CoA
分子名称: Fatty acid metabolism regulator protein, STEAROYL-COENZYME A
著者Fujihashi, M, Nakatani, T, Miki, K.
登録日2013-08-23
公開日2014-03-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural characterization of a ligand-bound form of Bacillus subtilis FadR involved in the regulation of fatty acid degradation.
Proteins, 82, 2014
6LOO
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Crystal Structure of Class IB terpene synthase bound with geranylcitronellyl diphosphate
分子名称: Tetraprenyl-beta-curcumene synthase, phosphono [(3~{R},6~{E},10~{E})-3,7,11,15-tetramethylhexadeca-6,10,14-trienyl] hydrogen phosphate, phosphono [(3~{S},6~{E},10~{E})-3,7,11,15-tetramethylhexadeca-6,10,14-trienyl] hydrogen phosphate
著者Fujihashi, M, Inagi, H, Miki, K.
登録日2020-01-07
公開日2020-11-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Characterization of Class IB Terpene Synthase: The First Crystal Structure Bound with a Substrate Surrogate.
Acs Chem.Biol., 15, 2020

 

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