Loading
PDBj
English日本語简体中文繁體中文한국어
✖
ﾒﾆｭｰPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7JOT
DownloadVisualize
BU of 7jot by Molmil
Adeno-associated virus strain AAV7 capsid icosahedral structure
分子名称: Capsid protein
著者Firlar, E, Yost, S.A, Mercer, A.C, Kaelber, J.T.
登録日2020-08-07
公開日2020-10-07
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Adeno-associated virus strain AAV7 capsid icosahedral structure
To Be Published
6WXI
DownloadVisualize
BU of 6wxi by Molmil
Colicin E1 fragment in nanodisc-embedded TolC
分子名称: Outer membrane protein TolC
著者Kaelber, J.T, Budiardjo, S.J, Firlar, E, Ikujuni, A.P, Slusky, J.S.G.
登録日2020-05-10
公開日2021-05-12
最終更新日2022-05-04
実験手法ELECTRON MICROSCOPY (2.84 Å)
主引用文献Colicin E1 opens its hinge to plug TolC.
Elife, 11, 2022
6WXH
DownloadVisualize
BU of 6wxh by Molmil
Colicin E1 fragment in nanodisc-embedded TolC
分子名称: Colicin-E1, Outer membrane protein TolC
著者Kaelber, J.T, Budiardjo, S.J, Firlar, E, Case, D.A, Ikujuni, A.P, Slusky, J.S.G.
登録日2020-05-10
公開日2021-05-12
最終更新日2022-05-04
実験手法ELECTRON MICROSCOPY (3.09 Å)
主引用文献Colicin E1 opens its hinge to plug TolC.
Elife, 11, 2022
6U95
DownloadVisualize
BU of 6u95 by Molmil
Adeno-associated virus strain AAVhu.37 capsid icosahedral structure
分子名称: Capsid protein VP1
著者Kaelber, J.T, Yost, S.A, Firlar, E, Mercer, A.C.
登録日2019-09-06
公開日2019-09-18
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (2.56 Å)
主引用文献Structure of the AAVhu.37 capsid by cryoelectron microscopy.
Acta Crystallogr.,Sect.F, 76, 2020
7RDQ
DownloadVisualize
BU of 7rdq by Molmil
Cryo-EM structure of Thermus thermophilus reiterative transcription complex with 11nt oligo-G RNA
分子名称: DNA (31-MER) nontemplate strand, DNA (31-MER) template strand, DNA-directed RNA polymerase subunit alpha, ...
著者Liu, Y, Ebright, R.H.
登録日2021-07-10
公開日2022-02-02
最終更新日2022-02-09
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural and mechanistic basis of reiterative transcription initiation.
Proc.Natl.Acad.Sci.USA, 119, 2022
8E5K
DownloadVisualize
BU of 8e5k by Molmil
Escherichia coli Rho-dependent transcription pre-termination complex containing 21 nt long RNA spacer, Mg-ADP-BeF3, and NusG; TEC part
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Molodtsov, V, Wang, C.
登録日2022-08-22
公開日2022-09-07
最終更新日2023-02-22
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structural basis of Rho-dependent transcription termination.
Nature, 614, 2023
8E6W
DownloadVisualize
BU of 8e6w by Molmil
Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, lambda-tR1 rut RNA, Mg-ADP-BeF3, and NusG; Rho part
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ...
著者Molodtsov, V, Wang, C, Ebright, R.H.
登録日2022-08-23
公開日2022-09-07
最終更新日2023-02-22
実験手法ELECTRON MICROSCOPY (4.27 Å)
主引用文献Structural basis of Rho-dependent transcription termination.
Nature, 614, 2023
8E5P
DownloadVisualize
BU of 8e5p by Molmil
Escherichia coli Rho-dependent transcription pre-termination complex containing 24 nt long RNA spacer, Mg-ADP-BeF3, and NusG; Rho hexamer part
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ...
著者Molodtsov, V, Wang, C.
登録日2022-08-22
公開日2022-09-07
最終更新日2023-02-22
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Structural basis of Rho-dependent transcription termination.
Nature, 614, 2023
8E70
DownloadVisualize
BU of 8e70 by Molmil
Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, dC75 rut mimic RNA, Mg-ADP-BeF3, and NusG; Rho hexamer part
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ...
著者Molodtsov, V, Wang, C, Ebright, R.H.
登録日2022-08-23
公開日2022-09-07
最終更新日2023-02-22
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structural basis of Rho-dependent transcription termination.
Nature, 614, 2023
8E6X
DownloadVisualize
BU of 8e6x by Molmil
Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, lambda-tR1 rut RNA, Mg-ADP-BeF3, and NusG; TEC part
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Molodtsov, V, Wang, C.
登録日2022-08-23
公開日2022-09-07
最終更新日2023-02-22
実験手法ELECTRON MICROSCOPY (4.27 Å)
主引用文献Structural basis of Rho-dependent transcription termination.
Nature, 614, 2023
8E5L
DownloadVisualize
BU of 8e5l by Molmil
Escherichia coli Rho-dependent transcription pre-termination complex containing 21 nt long RNA spacer, Mg-ADP-BeF3, and NusG; Rho hexamer part
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ...
著者Molodtsov, V, Wang, C.
登録日2022-08-22
公開日2022-09-07
最終更新日2023-02-22
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structural basis of Rho-dependent transcription termination.
Nature, 614, 2023
8E3H
DownloadVisualize
BU of 8e3h by Molmil
Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, Mg-ADP-BeF3, and NusG; Rho hexamer part
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ...
著者Molodtsov, V, Wang, C.
登録日2022-08-17
公開日2022-09-07
最終更新日2023-02-22
実験手法ELECTRON MICROSCOPY (6.5 Å)
主引用文献Structural basis of Rho-dependent transcription termination.
Nature, 614, 2023
8E6Z
DownloadVisualize
BU of 8e6z by Molmil
Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, dC75 rut mimic RNA, Mg-ADP-BeF3, and NusG; TEC part
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Molodtsov, V, Wang, C, Ebright, R.H.
登録日2022-08-23
公開日2022-09-07
最終更新日2023-02-22
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structural basis of Rho-dependent transcription termination.
Nature, 614, 2023
8E5O
DownloadVisualize
BU of 8e5o by Molmil
Escherichia coli Rho-dependent transcription pre-termination complex containing 24 nt long RNA spacer, Mg-ADP-BeF3, and NusG; TEC part
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Molodtsov, V, Wang, C.
登録日2022-08-22
公開日2022-09-07
最終更新日2023-02-22
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Structural basis of Rho-dependent transcription termination.
Nature, 614, 2023
8E3F
DownloadVisualize
BU of 8e3f by Molmil
Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, Mg-ADP-BeF3, and NusG; TEC part
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Molodtsov, V, Wang, C.
登録日2022-08-17
公開日2022-09-07
最終更新日2023-02-22
実験手法ELECTRON MICROSCOPY (6.5 Å)
主引用文献Structural basis of Rho-dependent transcription termination.
Nature, 614, 2023
7MLB
DownloadVisualize
BU of 7mlb by Molmil
Crystal structure of Thermus thermophilus transcription initiation complex with 5nt RNA
分子名称: DNA (5'-D(*TP*AP*TP*AP*AP*TP*GP*GP*AP*GP*GP*GP*AP*TP*GP*CP*AP*G)-3'), DNA (5'-D(P*CP*TP*GP*CP*AP*TP*CP*CP*CP*TP*GP*AP*GP*TP*G)-3'), DNA-directed RNA polymerase subunit alpha, ...
著者Liu, Y, Ebright, R.H.
登録日2021-04-28
公開日2022-02-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Structural and mechanistic basis of reiterative transcription initiation.
Proc.Natl.Acad.Sci.USA, 119, 2022
7MLI
DownloadVisualize
BU of 7mli by Molmil
Crystal structure of Thermus thermophilus reiterative transcription complex with 5nt oligo-C RNA
分子名称: DNA (5'-D(*TP*AP*TP*AP*AP*TP*GP*GP*GP*AP*GP*CP*TP*GP*CP*TP*AP*CP*GP*GP*AP*TP*G)-3'), DNA (5'-D(P*CP*AP*TP*CP*CP*GP*TP*AP*GP*GP*GP*CP*GP*GP*G)-3'), DNA-directed RNA polymerase subunit alpha, ...
著者Liu, Y, Ebright, R.H.
登録日2021-04-28
公開日2022-02-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Structural and mechanistic basis of reiterative transcription initiation.
Proc.Natl.Acad.Sci.USA, 119, 2022
7MLJ
DownloadVisualize
BU of 7mlj by Molmil
Crystal structure of Thermus thermophilus reiterative transcription complex with 4nt oligo-G RNA
分子名称: DNA (5'-D(*TP*AP*TP*AP*AP*TP*GP*GP*GP*AP*GP*CP*TP*GP*GP*CP*AP*CP*GP*GP*AP*TP*G)-3'), DNA (5'-D(P*CP*AP*TP*CP*CP*GP*TP*GP*CP*CP*CP*TP*GP*AP*G)-3'), DNA-directed RNA polymerase subunit alpha, ...
著者Liu, Y, Ebright, R.H.
登録日2021-04-28
公開日2022-02-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.75 Å)
主引用文献Structural and mechanistic basis of reiterative transcription initiation.
Proc.Natl.Acad.Sci.USA, 119, 2022
8T9X
DownloadVisualize
BU of 8t9x by Molmil
Zophobas morio black wasting virus strain NJ2-molitor virion structure
分子名称: DNA (5'-D(P*CP*AP*GP*GP*CP*CP*AP*AP*A)-3'), DNA (5'-D(P*CP*GP*A)-3'), DNA (5'-D(P*TP*CP*GP*AP*A)-3'), ...
著者Penzes, J.J, Kaelber, J.T.
登録日2023-06-26
公開日2024-02-21
実験手法ELECTRON MICROSCOPY (2 Å)
主引用文献Sequencing-free discovery by cryo-EM of a pathogenic parvovirus causing mass mortality of farmed beetles
To Be Published
8TA7
DownloadVisualize
BU of 8ta7 by Molmil
Zophobas morio black wasting virus strain OR-molitor empty capsid structure
分子名称: Major capsid protein
著者Penzes, J.J, Kaelber, J.T.
登録日2023-06-26
公開日2023-08-02
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Sequencing-free discovery by cryo-EM of a pathogenic parvovirus causing mass mortality of farmed beetles
To Be Published
8T9E
DownloadVisualize
BU of 8t9e by Molmil
Zophobas morio black wasting virus strain UT-morio empty capsid structure
分子名称: Major capsid protein
著者Penzes, J.J, Kaelber, J.T.
登録日2023-06-23
公開日2023-08-02
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Sequencing-free discovery by cryo-EM of a pathogenic parvovirus causing mass mortality of farmed beetles
To Be Published
8T9C
DownloadVisualize
BU of 8t9c by Molmil
Zophobas morio black wasting virus strain UT-morio virion structure
分子名称: DNA (5'-D(P*CP*AP*GP*GP*CP*CP*AP*A)-3'), DNA (5'-D(P*CP*G)-3'), DNA (5'-D(P*CP*GP*A)-3'), ...
著者Penzes, J.J, Kaelber, J.T.
登録日2023-06-23
公開日2023-08-23
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Sequencing-free discovery by cryo-EM of a pathogenic parvovirus causing mass mortality of farmed beetles
To Be Published
8TJE
DownloadVisualize
BU of 8tje by Molmil
Zophobas morio black wasting virus strain OR-molitor virion structure
分子名称: DNA (5'-D(P*CP*AP*GP*GP*CP*CP*AP*AP*A)-3'), DNA (5'-D(P*CP*G)-3'), DNA (5'-D(P*TP*CP*GP*AP*A)-3'), ...
著者Penzes, J.J, Kaelber, J.T.
登録日2023-07-20
公開日2023-08-23
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Sequencing-free discovery by cryo-EM of a pathogenic parvovirus causing mass mortality of farmed beetles
To Be Published
6X7F
DownloadVisualize
BU of 6x7f by Molmil
Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B2 (TTC-B2) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ...
著者Molodtsov, V, Ebright, R.H, Wang, C, Su, M.
登録日2020-05-29
公開日2020-09-02
最終更新日2020-09-23
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural basis of transcription-translation coupling.
Science, 369, 2020
6X7K
DownloadVisualize
BU of 6x7k by Molmil
Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ...
著者Molodtsov, V, Ebright, R.H, Wang, C, Su, M.
登録日2020-05-30
公開日2020-09-02
最終更新日2020-09-23
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural basis of transcription-translation coupling.
Science, 369, 2020

 

12>

219140

件を2024-05-01に公開中

PDB statisticsPDBj update infoContact PDBjnumon