Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7XSQ
DownloadVisualize
BU of 7xsq by Molmil
Structure of the Craspase
Descriptor: CHAT domain protein, RAMP superfamily protein, RNA (34-MER), ...
Authors:Feng, Y, Zhang, L.
Deposit date:2022-05-15
Release date:2022-11-09
Last modified:2022-12-14
Method:ELECTRON MICROSCOPY (2.88 Å)
Cite:Target RNA activates the protease activity of Craspase to confer antiviral defense.
Mol.Cell, 82, 2022
7XSP
DownloadVisualize
BU of 7xsp by Molmil
Structure of gRAMP-target RNA
Descriptor: RAMP superfamily protein, RNA (35-MER), RNA (5'-R(P*GP*GP*GP*GP*CP*AP*GP*AP*AP*AP*AP*UP*UP*GP*G)-3'), ...
Authors:Feng, Y, Zhang, L.X.
Deposit date:2022-05-15
Release date:2022-11-09
Last modified:2022-12-14
Method:ELECTRON MICROSCOPY (2.89 Å)
Cite:Target RNA activates the protease activity of Craspase to confer antiviral defense.
Mol.Cell, 82, 2022
7XT4
DownloadVisualize
BU of 7xt4 by Molmil
Structure of Craspase-NTR
Descriptor: CHAT domain protein, RAMP superfamily protein, RNA (34-MER), ...
Authors:Feng, Y, Zhang, L.
Deposit date:2022-05-16
Release date:2022-11-09
Last modified:2022-12-14
Method:ELECTRON MICROSCOPY (3.08 Å)
Cite:Target RNA activates the protease activity of Craspase to confer antiviral defense.
Mol.Cell, 82, 2022
7XSR
DownloadVisualize
BU of 7xsr by Molmil
Structure of Craspase-target RNA
Descriptor: CHAT domain protein, RAMP superfamily protein, RNA (34-MER), ...
Authors:Feng, Y, Zhang, L.
Deposit date:2022-05-15
Release date:2022-11-09
Last modified:2022-12-14
Method:ELECTRON MICROSCOPY (2.97 Å)
Cite:Target RNA activates the protease activity of Craspase to confer antiviral defense.
Mol.Cell, 82, 2022
7XSS
DownloadVisualize
BU of 7xss by Molmil
Structure of Craspase-CTR
Descriptor: CHAT domain protein, RAMP superfamily protein, RNA (34-MER), ...
Authors:Feng, Y, Zang, L.X.
Deposit date:2022-05-15
Release date:2022-11-09
Last modified:2022-12-14
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Target RNA activates the protease activity of Craspase to confer antiviral defense.
Mol.Cell, 82, 2022
7XSO
DownloadVisualize
BU of 7xso by Molmil
Structure of the type III-E CRISPR-Cas effector gRAMP
Descriptor: RAMP superfamily protein, RNA (35-MER), ZINC ION
Authors:Feng, Y, Zhang, L.
Deposit date:2022-05-15
Release date:2023-03-22
Method:ELECTRON MICROSCOPY (3.01 Å)
Cite:Target RNA activates the protease activity of Craspase to confer antiviral defense.
Mol.Cell, 82, 2022
7YHS
DownloadVisualize
BU of 7yhs by Molmil
Structure of Csy-AcrIF4-dsDNA
Descriptor: AcrIF4, CRISPR type I-F/YPEST-associated protein Csy2, CRISPR-associated protein Csy3, ...
Authors:Feng, Y, Zhang, L.X.
Deposit date:2022-07-14
Release date:2023-03-29
Method:ELECTRON MICROSCOPY (3.37 Å)
Cite:Anti-CRISPR protein AcrIF4 inhibits the type I-F CRISPR-Cas surveillance complex by blocking nuclease recruitment and DNA cleavage.
J.Biol.Chem., 298, 2022
6INW
DownloadVisualize
BU of 6inw by Molmil
A Pericyclic Reaction enzyme
Descriptor: O-methyltransferase lepI, S-ADENOSYLMETHIONINE
Authors:Feng, Y, Chang, M, Wang, H, Liu, Z, Zhou, Y.
Deposit date:2018-10-28
Release date:2019-07-03
Method:X-RAY DIFFRACTION (1.798 Å)
Cite:Crystal structure of the multifunctional SAM-dependent enzyme LepI provides insights into its catalytic mechanism.
Biochem.Biophys.Res.Commun., 515, 2019
6KG9
DownloadVisualize
BU of 6kg9 by Molmil
Solution structure of CaDoc0917 from Clostridium acetobutylicum
Descriptor: And cellulose-binding endoglucanase family 9 CelL ortholog dockerin domain, CALCIUM ION
Authors:Feng, Y, Yao, X.
Deposit date:2019-07-11
Release date:2020-07-08
Last modified:2020-11-04
Method:SOLUTION NMR
Cite:Discovery and mechanism of a pH-dependent dual-binding-site switch in the interaction of a pair of protein modules.
Sci Adv, 6, 2020
6KGF
DownloadVisualize
BU of 6kgf by Molmil
Crystal structure of CaDoc0917(R16D)-CaCohA2 complex at pH 8.2
Descriptor: And cellulose-binding endoglucanase family 9 CelL ortholog dockerin domain, CALCIUM ION, Probably cellulosomal scaffolding protein, ...
Authors:Feng, Y, Yao, X.
Deposit date:2019-07-11
Release date:2020-07-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Discovery and mechanism of a pH-dependent dual-binding-site switch in the interaction of a pair of protein modules.
Sci Adv, 6, 2020
6KGC
DownloadVisualize
BU of 6kgc by Molmil
Crystal structure of CaDoc0917(R49D)-CaCohA2 complex at pH 5.4
Descriptor: And cellulose-binding endoglucanase family 9 CelL ortholog dockerin domain, CALCIUM ION, Probably cellulosomal scaffolding protein, ...
Authors:Feng, Y, Yao, X.
Deposit date:2019-07-11
Release date:2020-07-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Discovery and mechanism of a pH-dependent dual-binding-site switch in the interaction of a pair of protein modules.
Sci Adv, 6, 2020
6KGD
DownloadVisualize
BU of 6kgd by Molmil
Crystal structure of CaDoc0917(R49D)-CaCohA2 complex at pH 8.0
Descriptor: And cellulose-binding endoglucanase family 9 CelL ortholog dockerin domain, CALCIUM ION, Probably cellulosomal scaffolding protein, ...
Authors:Feng, Y, Yao, X.
Deposit date:2019-07-11
Release date:2020-07-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Discovery and mechanism of a pH-dependent dual-binding-site switch in the interaction of a pair of protein modules.
Sci Adv, 6, 2020
6KGE
DownloadVisualize
BU of 6kge by Molmil
Crystal structure of CaDoc0917(R16D)-CaCohA2 complex at pH 5.5
Descriptor: And cellulose-binding endoglucanase family 9 CelL ortholog dockerin domain, CALCIUM ION, Probably cellulosomal scaffolding protein, ...
Authors:Feng, Y, Yao, X.
Deposit date:2019-07-11
Release date:2020-07-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery and mechanism of a pH-dependent dual-binding-site switch in the interaction of a pair of protein modules.
Sci Adv, 6, 2020
6KG8
DownloadVisualize
BU of 6kg8 by Molmil
Solution structure of CaCohA2 from Clostridium acetobutylicum
Descriptor: Probably cellulosomal scaffolding protein, secreted cellulose-binding and cohesin domain
Authors:Feng, Y, Yao, X.
Deposit date:2019-07-11
Release date:2020-07-08
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Discovery and mechanism of a pH-dependent dual-binding-site switch in the interaction of a pair of protein modules.
Sci Adv, 6, 2020
8J30
DownloadVisualize
BU of 8j30 by Molmil
Crystal structure of ApNGT with Q469A and M218A mutations in complex with UDP-GLC
Descriptor: UDP-glucose:protein N-beta-glucosyltransferase, URIDINE-5'-DIPHOSPHATE, URIDINE-5'-DIPHOSPHATE-GLUCOSE
Authors:Feng, Y, Hao, Z, Guo, Q, Zheng, J, Da, L, Peng, W.
Deposit date:2023-04-15
Release date:2023-08-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Investigation of the Catalytic Mechanism of a Soluble N-glycosyltransferase Allows Synthesis of N-glycans at Noncanonical Sequons.
Jacs Au, 3, 2023
6JNX
DownloadVisualize
BU of 6jnx by Molmil
Cryo-EM structure of a Q-engaged arrested complex
Descriptor: Antiterminator Q protein, DNA (63-MER), DNA-directed RNA polymerase subunit alpha, ...
Authors:Feng, Y, Shi, J.
Deposit date:2019-03-18
Release date:2019-06-12
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.08 Å)
Cite:Structural basis of Q-dependent transcription antitermination.
Nat Commun, 10, 2019
6JNY
DownloadVisualize
BU of 6jny by Molmil
Crystal structure of bacteriophage 21 Q protein
Descriptor: Antiterminator Q protein
Authors:Feng, Y, Shi, J.
Deposit date:2019-03-18
Release date:2019-06-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.451 Å)
Cite:Structural basis of Q-dependent transcription antitermination.
Nat Commun, 10, 2019
6KH2
DownloadVisualize
BU of 6kh2 by Molmil
Crystal structure of Nicotinic acid mononucleotide adenylyltransferase mutant P22K/Y84V/Y118D/C132L/W176Y from Escherichia coli
Descriptor: Probable nicotinate-nucleotide adenylyltransferase
Authors:Feng, Y, Xue, S, Zhao, Z, Wang, X.
Deposit date:2019-07-12
Release date:2020-07-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.04 Å)
Cite:Crystal structure of Nicotinic acid mononucleotide adenylyltransferase mutant P22K/Y84V/Y118D/C132L/W176Y from Escherichia coli
To Be Published
5NLL
DownloadVisualize
BU of 5nll by Molmil
CLOSTRIDIUM BEIJERINCKII FLAVODOXIN: OXIDIZED
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVODOXIN
Authors:Ludwig, M.L, Pattridge, K.A, Metzger, A.L, Dixon, M.M, Eren, M, Feng, Y, Swenson, R.
Deposit date:1996-12-23
Release date:1997-03-12
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Control of oxidation-reduction potentials in flavodoxin from Clostridium beijerinckii: the role of conformation changes.
Biochemistry, 36, 1997
5NUL
DownloadVisualize
BU of 5nul by Molmil
CLOSTRIDIUM BEIJERINCKII FLAVODOXIN MUTANT: G57T SEMIQUINONE (150K)
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVODOXIN
Authors:Ludwig, M.L, Pattridge, K.A, Metzger, A.L, Dixon, M.M, Eren, M, Feng, Y, Swenson, R.
Deposit date:1996-12-20
Release date:1997-03-12
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Control of oxidation-reduction potentials in flavodoxin from Clostridium beijerinckii: the role of conformation changes.
Biochemistry, 36, 1997
4W4X
DownloadVisualize
BU of 4w4x by Molmil
JNK2/3 in complex with 3-(4-{[(4-fluorophenyl)carbamoyl]amino}-1H-pyrazol-1-yl)-N-(2-methylpyridin-4-yl)benzamide
Descriptor: 3-(4-{[(4-fluorophenyl)carbamoyl]amino}-1H-pyrazol-1-yl)-N-(2-methylpyridin-4-yl)benzamide, c-jun NH2-terminal kinase 3
Authors:Park, H, Iqbal, S, Hernandez, P, Mora, R, Zheng, K, Feng, Y, LoGrasso, P.
Deposit date:2014-08-15
Release date:2015-02-11
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural Basis and Biological Consequences for JNK2/3 Isoform Selective Aminopyrazoles.
Sci Rep, 5, 2015
4W4V
DownloadVisualize
BU of 4w4v by Molmil
JNK2/3 in complex with 3-(4-{[(2-chlorophenyl)carbamoyl]amino}-1H-pyrazol-1-yl)-N-(2-methylpyridin-4-yl)benzamide
Descriptor: 3-(4-{[(2-chlorophenyl)carbamoyl]amino}-1H-pyrazol-1-yl)-N-(2-methylpyridin-4-yl)benzamide, c-Jun N-terminal kinase 3
Authors:Park, H, Iqbal, S, Hernandez, P, Mora, R, Zheng, K, Feng, Y, LoGrasso, P.
Deposit date:2014-08-15
Release date:2015-02-11
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structural Basis and Biological Consequences for JNK2/3 Isoform Selective Aminopyrazoles.
Sci Rep, 5, 2015
4W4Y
DownloadVisualize
BU of 4w4y by Molmil
JNK2/3 in complex with 3-(4-{[(4-methylphenyl)carbamoyl]amino}-1H-pyrazol-1-yl)-N-(2-methylpyridin-4-yl)benzamide
Descriptor: 3-(4-{[(4-methylphenyl)carbamoyl]amino}-1H-pyrazol-1-yl)-N-(2-methylpyridin-4-yl)benzamide, c-jun NH2-terminal kinase 3
Authors:Park, H, Iqbal, S, Hernandez, P, Mora, R, Zheng, K, Feng, Y, LoGrasso, P.
Deposit date:2014-08-15
Release date:2015-02-11
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Basis and Biological Consequences for JNK2/3 Isoform Selective Aminopyrazoles.
Sci Rep, 5, 2015
4W4W
DownloadVisualize
BU of 4w4w by Molmil
JNK2/3 in complex with N-(2-methylpyridin-4-yl)-3-{4-[(phenylcarbamoyl)amino]-1H-pyrazol-1-yl}benzamide
Descriptor: N-(2-methylpyridin-4-yl)-3-{4-[(phenylcarbamoyl)amino]-1H-pyrazol-1-yl}benzamide, c-Jun N-terminal kinase 3
Authors:Park, H, Iqbal, S, Hernandez, P, Mora, R, Zheng, K, Feng, Y, LoGrasso, P.
Deposit date:2014-08-15
Release date:2015-02-11
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Basis and Biological Consequences for JNK2/3 Isoform Selective Aminopyrazoles.
Sci Rep, 5, 2015
1FLA
DownloadVisualize
BU of 1fla by Molmil
CLOSTRIDIUM BEIJERINCKII FLAVODOXIN MUTANT: G57D REDUCED
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVODOXIN
Authors:Ludwig, M.L, Pattridge, K.A, Metzger, A.L, Dixon, M.M, Eren, M, Feng, Y, Swenson, R.
Deposit date:1996-12-18
Release date:1997-03-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Control of oxidation-reduction potentials in flavodoxin from Clostridium beijerinckii: the role of conformation changes.
Biochemistry, 36, 1997

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon