Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5YS5
DownloadVisualize
BU of 5ys5 by Molmil
Crystal structure of Multicopper Oxidase CueO G304K mutant with seven copper ions
分子名称: Blue copper oxidase CueO, COPPER (II) ION
著者Wang, H.Q, Liu, X.Q, Zhao, J.T, Yue, Q.X, Yan, Y.H, Dong, Y.H, Fan, Y.L, Tian, J, Wu, N.F, Gong, Y.
登録日2017-11-13
公開日2018-10-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structures of multicopper oxidase CueO G304K mutant: structural basis of the increased laccase activity
Sci Rep, 8, 2018
3OIX
DownloadVisualize
BU of 3oix by Molmil
Crystal structure of the putative dihydroorotate dehydrogenase from Streptococcus mutans
分子名称: FLAVIN MONONUCLEOTIDE, GLYCEROL, Putative dihydroorotate dehydrogenase; dihydroorotate oxidase
著者Liu, Y, Gao, Z.Q, Liu, C.P, Dong, Y.H.
登録日2010-08-20
公開日2010-09-08
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.399 Å)
主引用文献Structure of the putative dihydroorotate dehydrogenase from Streptococcus mutans
Acta Crystallogr.,Sect.F, 67, 2011
4JKZ
DownloadVisualize
BU of 4jkz by Molmil
Crystal structure of ms6564 from mycobacterium smegmatis
分子名称: Transcriptional regulator, TetR family
著者Yang, S.F, Gao, Z.Q, He, Z.G, Dong, Y.H.
登録日2013-03-12
公開日2013-06-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis for interaction between Mycobacterium smegmatis Ms6564, a TetR family master regulator, and its target DNA.
J.Biol.Chem., 288, 2013
4JL3
DownloadVisualize
BU of 4jl3 by Molmil
Crystal structure of ms6564-dna complex
分子名称: DNA (31-MER), Transcriptional regulator, TetR family
著者Yang, S.F, Gao, Z.Q, He, Z.G, Dong, Y.H.
登録日2013-03-12
公開日2013-06-26
最終更新日2022-08-24
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis for interaction between Mycobacterium smegmatis Ms6564, a TetR family master regulator, and its target DNA.
J.Biol.Chem., 288, 2013
4MMG
DownloadVisualize
BU of 4mmg by Molmil
crystal structure of YafQ mutant H87Q from E.coli
分子名称: SULFATE ION, mRNA interferase YafQ
著者Liang, Y.J, Gao, Z.Q, Liu, Q.S, Dong, Y.H.
登録日2013-09-09
公開日2014-06-25
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural and Functional Characterization of Escherichia coli Toxin-Antitoxin Complex DinJ-YafQ
J.Biol.Chem., 289, 2014
4ML2
DownloadVisualize
BU of 4ml2 by Molmil
Crystal structure of wild-type YafQ
分子名称: SULFATE ION, mRNA interferase YafQ
著者Liang, Y.J, Gao, Z.Q, Liu, Q.S, Dong, Y.H.
登録日2013-09-06
公開日2014-06-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural and Functional Characterization of Escherichia coli Toxin-Antitoxin Complex DinJ-YafQ
J.Biol.Chem., 289, 2014
4ML0
DownloadVisualize
BU of 4ml0 by Molmil
Crystal structure of E.coli DinJ-YafQ complex
分子名称: Predicted antitoxin of YafQ-DinJ toxin-antitoxin system, Predicted toxin of the YafQ-DinJ toxin-antitoxin system, SULFATE ION
著者Liang, Y.J, Gao, Z.Q, Liu, Q.S, Dong, Y.H.
登録日2013-09-06
公開日2014-06-25
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural and Functional Characterization of Escherichia coli Toxin-Antitoxin Complex DinJ-YafQ
J.Biol.Chem., 289, 2014
5IFG
DownloadVisualize
BU of 5ifg by Molmil
Crystal structure of HigA-HigB complex from E. Coli
分子名称: Antitoxin HigA, mRNA interferase HigB
著者Yang, J.S, Zhou, K, Gao, z.Q, Liu, Q.S, Dong, Y.H.
登録日2016-02-26
公開日2017-03-01
実験手法X-RAY DIFFRACTION (2.702 Å)
主引用文献Structural insight into the E. coli HigBA complex
Biochem. Biophys. Res. Commun., 478, 2016
6JQ4
DownloadVisualize
BU of 6jq4 by Molmil
HIGA Escherichia coli-K12
分子名称: Antitoxin HigA
著者She, Z, Xu, B.S.
登録日2019-03-28
公開日2019-05-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Conformational changes of antitoxin HigA from Escherichia coli str. K-12 upon binding of its cognate toxin HigB reveal a new regulation mechanism in toxin-antitoxin systems.
Biochem.Biophys.Res.Commun., 514, 2019
4NK4
DownloadVisualize
BU of 4nk4 by Molmil
Crystal structure of FabI from Candidatus Liberibacter asiaticus
分子名称: DI(HYDROXYETHYL)ETHER, Enoyl-[acyl-carrier-protein] reductase [NADH]
著者Jiang, L, Gao, Z.Q, Dong, Y.H.
登録日2013-11-12
公開日2014-02-12
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structures and kinetic properties of enoyl-acyl carrier protein reductase I from Candidatus Liberibacter asiaticus.
Protein Sci., 23, 2014
4NK5
DownloadVisualize
BU of 4nk5 by Molmil
Crystal structure of FabI-NAD complex from Candidatus Liberibacter asiaticus
分子名称: Enoyl-[acyl-carrier-protein] reductase [NADH], NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Jiang, L, Gao, Z.Q, Dong, Y.H.
登録日2013-11-12
公開日2014-02-12
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structures and kinetic properties of enoyl-acyl carrier protein reductase I from Candidatus Liberibacter asiaticus.
Protein Sci., 23, 2014
4PQZ
DownloadVisualize
BU of 4pqz by Molmil
Crystal structure of swt1 C-terminal domain from yeast
分子名称: Transcriptional protein SWT1
著者Peng, S.X, Gao, Z.Q, Liu, Q.S, Dong, Y.H.
登録日2014-03-05
公開日2014-12-03
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献High-resolution crystal structure reveals a HEPN domain at the C-terminal region of S. cerevisiae RNA endonuclease Swt1.
Biochem.Biophys.Res.Commun., 453, 2014
7D8U
DownloadVisualize
BU of 7d8u by Molmil
Crystal structure of the C-terminal domain of pNP868R from African swine fever virus
分子名称: 1,2-ETHANEDIOL, FORMIC ACID, GTP--RNA guanylyltransferase, ...
著者Du, X, Geng, Z, Zhang, H.
登録日2020-10-10
公開日2020-12-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure and Biochemical Characteristic of the Methyltransferase (MTase) Domain of RNA Capping Enzyme from African Swine Fever Virus.
J.Virol., 2020
7AER
DownloadVisualize
BU of 7aer by Molmil
Rebuilt and re-refined PDB entry 5yep: tri-AMPylated Shewanella oneidensis HEPN toxin in complex with MNT antitoxin
分子名称: ADENOSINE MONOPHOSPHATE, Toxin-antitoxin system antidote Mnt family, Toxin-antitoxin system toxin HepN family
著者Tamulaitiene, G, Sasnauskas, G, Songailiene, I, Juozapaitis, J, Siksnys, V.
登録日2020-09-18
公開日2020-12-30
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献HEPN-MNT Toxin-Antitoxin System: The HEPN Ribonuclease Is Neutralized by OligoAMPylation.
Mol.Cell, 80, 2020
7ETR
DownloadVisualize
BU of 7etr by Molmil
Crystal structure of SO_1444-SO_1445 complex from Shewanella oneidensis
分子名称: Toxin module of toxin-antitoxin system RelE/StbE family, Transcriptional regulator CopG family
著者Zhou, J, Zhang, H.
登録日2021-05-13
公開日2022-03-23
実験手法X-RAY DIFFRACTION (3.804 Å)
主引用文献Insights into the Neutralization and DNA Binding of Toxin-Antitoxin System ParE SO-CopA SO by Structure-Function Studies.
Microorganisms, 9, 2021
5WVZ
DownloadVisualize
BU of 5wvz by Molmil
The crystal structure of Cren7 mutant L28F in complex with dsDNA
分子名称: Chromatin protein Cren7, DNA (5'-D(*GP*CP*GP*AP*TP*CP*GP*C)-3')
著者Zhang, Z.F, Zhao, M.H, Wang, L, Chen, Y.Y, Dong, Y.H, Gong, Y, Huang, L.
登録日2016-12-30
公開日2017-04-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Roles of Leu28 side chain intercalation in the interaction between Cren7 and DNA
Biochem. J., 474, 2017
5WVY
DownloadVisualize
BU of 5wvy by Molmil
The crystal structure of Cren7 mutant L28V in complex with dsDNA
分子名称: Chromatin protein Cren7, DNA (5'-D(*GP*TP*GP*AP*TP*CP*AP*C)-3')
著者Zhang, Z.F, Zhao, M.H, Wang, L, Chen, Y.Y, Dong, Y.H, Gong, Y, Huang, L.
登録日2016-12-29
公開日2017-04-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Roles of Leu28 side chain intercalation in the interaction between Cren7 and DNA
Biochem. J., 474, 2017
5WVW
DownloadVisualize
BU of 5wvw by Molmil
The crystal structure of Cren7 mutant L28A in complex with dsDNA
分子名称: Chromatin protein Cren7, DNA (5'-D(*GP*TP*GP*AP*TP*CP*AP*C)-3')
著者Zhang, Z.F, Zhao, M.H, Wang, L, Chen, Y.Y, Dong, Y.H, Gong, Y, Huang, L.
登録日2016-12-29
公開日2017-04-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Roles of Leu28 side chain intercalation in the interaction between Cren7 and DNA
Biochem. J., 474, 2017
5WWC
DownloadVisualize
BU of 5wwc by Molmil
The crystal structure of Cren7 mutant L28M in complex with dsDNA
分子名称: Chromatin protein Cren7, DNA (5'-D(*GP*TP*AP*AP*TP*TP*AP*C)-3')
著者Zhang, Z.F, Zhao, M.H, Wang, L, Chen, Y.Y, Dong, Y.H, Gong, Y, Huang, L.
登録日2016-12-31
公開日2017-04-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Roles of Leu28 side chain intercalation in the interaction between Cren7 and DNA
Biochem. J., 474, 2017
5XMG
DownloadVisualize
BU of 5xmg by Molmil
Crystal structure of PA3488 from Pseudomonas aeruginosa
分子名称: Uncharacterized protein
著者She, Z, Gao, Z.Q.
登録日2017-05-15
公開日2018-05-16
最終更新日2018-12-12
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural and SAXS analysis of Tle5-Tli5 complex reveals a novel inhibition mechanism of H2-T6SS in Pseudomonas aeruginosa.
Protein Sci., 26, 2017
5XEU
DownloadVisualize
BU of 5xeu by Molmil
crystal structure of Hcp2 from Salmonella typhimurium
分子名称: Hcp1 family type VI secretion system effector
著者Lin, Q.P, Gao, Z.Q, Zhang, H.
登録日2017-04-06
公開日2017-08-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of the putative cytoplasmic protein STM0279 (Hcp2) from Salmonella typhimurium
Acta Crystallogr F Struct Biol Commun, 73, 2017
6A2H
DownloadVisualize
BU of 6a2h by Molmil
Architectural roles of Cren7 in folding crenarchaeal chromatin filament
分子名称: Chromatin protein Cren7, DNA (5'-D(P*AP*AP*TP*TP*AP*C)-3'), DNA (5'-D(P*GP*TP*AP*AP*TP*T)-3')
著者Zhang, Z.F, Zhao, M.H, Chen, Y.Y, Wang, L, Dong, Y.H, Gong, Y, Huang, L.
登録日2018-06-11
公開日2019-01-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Architectural roles of Cren7 in folding crenarchaeal chromatin filament.
Mol. Microbiol., 111, 2019
6A2I
DownloadVisualize
BU of 6a2i by Molmil
Architectural roles of Cren7 in folding crenarchaeal chromatin filament
分子名称: Chromatin protein Cren7, DNA (5'-D(*CP*GP*TP*AP*GP*CP*TP*AP*AP*TP*TP*AP*GP*CP*TP*AP*CP*G)-3')
著者Zhang, Z.F, Zhao, M.H, Chen, Y.Y, Wang, L, Dong, Y.H, Gong, Y, Huang, L.
登録日2018-06-11
公開日2019-01-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Architectural roles of Cren7 in folding crenarchaeal chromatin filament.
Mol. Microbiol., 111, 2019
7X32
DownloadVisualize
BU of 7x32 by Molmil
Crystal structure of E. coli NfsB in complex with berberine
分子名称: BERBERINE, DIMETHYL SULFOXIDE, Dihydropteridine reductase, ...
著者Zhang, H, Wen, H.Y.
登録日2022-02-27
公開日2022-10-12
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.829 Å)
主引用文献Structural basis for the transformation of the traditional medicine berberine by bacterial nitroreductase.
Acta Crystallogr D Struct Biol, 78, 2022
<1234

 

219869

件を2024-05-15に公開中

PDB statisticsPDBj update infoContact PDBjnumon