Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5FV9
DownloadVisualize
BU of 5fv9 by Molmil
Crystal structure of GalNAc-T2 in complex with compound 16d
Descriptor: 1,2-ETHANEDIOL, GALNAC-T2, GLYCEROL, ...
Authors:Ghirardello, M, Rivas, M, Lacetera, A, Delso, I, Lira-Navarrete, E, Tejero, T, Martin-Santamaria, S, Hurtado-Guerrero, R, Merino, P.
Deposit date:2016-02-03
Release date:2016-03-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Glycomimetics Targeting Glycosyltransferases: Synthetic, Computational and Structural Studies of Less-Polar Conjugates.
Chemistry, 22, 2016
1P8L
DownloadVisualize
BU of 1p8l by Molmil
New Crystal Structure of Chlorella Virus DNA Ligase-Adenylate
Descriptor: ADENOSINE MONOPHOSPHATE, PBCV-1 DNA ligase
Authors:Odell, M, Malinina, L, Teplova, M, Shuman, S.
Deposit date:2003-05-07
Release date:2003-08-26
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Analysis of the DNA Joining Repertoire of Chlorella Virus DNA ligase and a New Crystal Structure of the Ligase-Adenylate Intermediate
Nucleic Acids Res., 31, 2003
1N5U
DownloadVisualize
BU of 1n5u by Molmil
X-RAY STUDY OF HUMAN SERUM ALBUMIN COMPLEXED WITH HEME
Descriptor: MYRISTIC ACID, PROTOPORPHYRIN IX CONTAINING FE, SERUM ALBUMIN
Authors:Wardell, M, Wang, Z, Ho, J.X, Robert, J, Ruker, F, Ruble, J, Carter, D.C.
Deposit date:2002-11-07
Release date:2003-06-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Atomic Structure of Human Methemalbumin at 1.9 A
Biochem.Biophys.Res.Commun., 291, 2002
2BRA
DownloadVisualize
BU of 2bra by Molmil
Structure of N-Terminal FAD Binding motif of mouse MICAL
Descriptor: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, NEDD9 INTERACTING PROTEIN WITH CALPONIN HOMOLOGY AND LIM DOMAINS
Authors:Nadella, M, Bianchet, M.A, Gabelli, S.B, Amzel, L.M.
Deposit date:2005-05-04
Release date:2005-11-01
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and activity of the axon guidance protein MICAL.
Proc. Natl. Acad. Sci. U.S.A., 102, 2005
1FVI
DownloadVisualize
BU of 1fvi by Molmil
CRYSTAL STRUCTURE OF CHLORELLA VIRUS DNA LIGASE-ADENYLATE
Descriptor: ADENOSINE MONOPHOSPHATE, CHLORELLA VIRUS DNA LIGASE-ADENYLATE, SULFATE ION
Authors:Odell, M, Sriskanda, V, Shuman, S, Nikolov, D.B.
Deposit date:2000-09-20
Release date:2000-11-22
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of eukaryotic DNA ligase-adenylate illuminates the mechanism of nick sensing and strand joining.
Mol.Cell, 6, 2000
5OBV
DownloadVisualize
BU of 5obv by Molmil
Mycoplasma genitalium DnaK deletion mutant lacking SBDalpha in complex with ADP and Pi.
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Chaperone protein DnaK, PHOSPHATE ION
Authors:Adell, M, Calisto, B, Fita, I, Martinelli, L.
Deposit date:2017-06-29
Release date:2018-05-09
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:The nucleotide-bound/substrate-bound conformation of the Mycoplasma genitalium DnaK chaperone.
Protein Sci., 27, 2018
5OBX
DownloadVisualize
BU of 5obx by Molmil
Mycoplasma genitalium DnaK-NBD
Descriptor: Chaperone protein DnaK, GLYCEROL, SULFATE ION, ...
Authors:Adell, M, Calisto, B, Fita, I, Martinelli, L.
Deposit date:2017-06-29
Release date:2018-05-09
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:The nucleotide-bound/substrate-bound conformation of the Mycoplasma genitalium DnaK chaperone.
Protein Sci., 27, 2018
5OBW
DownloadVisualize
BU of 5obw by Molmil
Mycoplasma genitalium DnaK-NBD in complex with ATP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Chaperone protein DnaK, GLYCEROL, ...
Authors:Adell, M, Calisto, B, Fita, I, Martinelli, L.
Deposit date:2017-06-29
Release date:2018-05-09
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The nucleotide-bound/substrate-bound conformation of the Mycoplasma genitalium DnaK chaperone.
Protein Sci., 27, 2018
5OBY
DownloadVisualize
BU of 5oby by Molmil
Mycoplasma genitalium DnaK-NBD in complex with AMP-PNP
Descriptor: Chaperone protein DnaK, GLYCEROL, MAGNESIUM ION, ...
Authors:Adell, M, Calisto, B, Fita, I, Martinelli, L.
Deposit date:2017-06-29
Release date:2018-05-09
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The nucleotide-bound/substrate-bound conformation of the Mycoplasma genitalium DnaK chaperone.
Protein Sci., 27, 2018
5OBU
DownloadVisualize
BU of 5obu by Molmil
Mycoplasma genitalium DnaK deletion mutant lacking SBDalpha in complex with AMPPNP.
Descriptor: Chaperone protein DnaK, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Adell, M, Calisto, B, Fita, I, Martinelli, L.
Deposit date:2017-06-29
Release date:2018-05-09
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:The nucleotide-bound/substrate-bound conformation of the Mycoplasma genitalium DnaK chaperone.
Protein Sci., 27, 2018
7ZHD
DownloadVisualize
BU of 7zhd by Molmil
Crystal structure of CtaZ in complex with Closthioamide
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, SODIUM ION, Transcription activator effector binding, ...
Authors:Gude, F, Molloy, E.M, Horch, T, Dell, M, Dunbar, K.L, Krabbe, J, Groll, M, Hertweck, C.
Deposit date:2022-04-06
Release date:2022-11-09
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:A Specialized Polythioamide-Binding Protein Confers Antibiotic Self-Resistance in Anaerobic Bacteria.
Angew.Chem.Int.Ed.Engl., 61, 2022
7ZHE
DownloadVisualize
BU of 7zhe by Molmil
Crystal structure of CtaZ from Ruminiclostridium cellulolyticum
Descriptor: GLYCEROL, SODIUM ION, Transcription activator effector binding
Authors:Gude, F, Molloy, E.M, Horch, T, Dell, M, Dunbar, K.L, Krabbe, J, Groll, M, Hertweck, C.
Deposit date:2022-04-06
Release date:2022-11-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:A Specialized Polythioamide-Binding Protein Confers Antibiotic Self-Resistance in Anaerobic Bacteria.
Angew.Chem.Int.Ed.Engl., 61, 2022
8RNY
DownloadVisualize
BU of 8rny by Molmil
Hen Egg White Lysozyme soaked with with [H2Ind][trans-RuCl4(DMSO)(HInd)]
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ...
Authors:Oszajca, M, Flejszar, M, Szura, A, Drozdz, P, Brindell, M, Kurpiewska, K.
Deposit date:2024-01-11
Release date:2024-02-07
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.02 Å)
Cite:Exploring the coordination chemistry of ruthenium complexes with lysozymes: structural and in-solution studies.
Front Chem, 12, 2024
8RNW
DownloadVisualize
BU of 8rnw by Molmil
Hen Egg White Lysozyme soaked with trans-Ru(DMSO)4Cl2
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ...
Authors:Oszajca, M, Flejszar, M, Szura, A, Drozdz, P, Brindell, M, Kurpiewska, K.
Deposit date:2024-01-11
Release date:2024-01-24
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:Exploring the coordination chemistry of ruthenium complexes with lysozymes: structural and in-solution studies.
Front Chem, 12, 2024
8RNV
DownloadVisualize
BU of 8rnv by Molmil
Hen Egg White Lysozyme soaked with cis-Ru(DMSO)4Cl2
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ...
Authors:Oszajca, M, Flejszar, M, Szura, A, Drozdz, P, Brindell, M, Kurpiewska, K.
Deposit date:2024-01-11
Release date:2024-01-24
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:Exploring the coordination chemistry of ruthenium complexes with lysozymes: structural and in-solution studies.
Front Chem, 12, 2024
8RNX
DownloadVisualize
BU of 8rnx by Molmil
Hen Egg White Lysozyme soaked with [HIsq][trans-RuCl4(DMSO)(Isq)]
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ...
Authors:Oszajca, M, Flejszar, M, Szura, A, Drozdz, P, Brindell, M, Kurpiewska, K.
Deposit date:2024-01-11
Release date:2024-01-24
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Exploring the coordination chemistry of ruthenium complexes with lysozymes: structural and in-solution studies.
Front Chem, 12, 2024
7QRE
DownloadVisualize
BU of 7qre by Molmil
Structure of the hetero-tetramer complex between precursor membrane protein fragment (pr) and envelope protein (E) from tick-borne encephalitis virus
Descriptor: ACETATE ION, Envelope protein E, Genome polyprotein, ...
Authors:Vaney, M.C, Dellarole, M, Rey, F.A.
Deposit date:2022-01-11
Release date:2022-05-25
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Evolution and activation mechanism of the flavivirus class II membrane-fusion machinery.
Nat Commun, 13, 2022
4BTE
DownloadVisualize
BU of 4bte by Molmil
DJ-1 Cu(I) complex
Descriptor: COPPER (I) ION, PROTEIN DJ-1
Authors:Puno, M.R.A, Odell, M, Moody, P.C.E.
Deposit date:2013-06-14
Release date:2013-11-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Structure of Cu(I)-Bound Dj-1 Reveals a Biscysteinate Metal Binding Site at the Homodimer Interface: Insights Into Mutational Inactivation of Dj-1 in Parkinsonism.
J.Am.Chem.Soc., 135, 2013
5OMZ
DownloadVisualize
BU of 5omz by Molmil
Solution structure of domain III (DIII)of Zika virus Envelope protein
Descriptor: Envelope Protein
Authors:Zerbe, O, Bardelli, M.
Deposit date:2017-08-02
Release date:2017-10-04
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:A Human Bi-specific Antibody against Zika Virus with High Therapeutic Potential.
Cell, 171, 2017
8OII
DownloadVisualize
BU of 8oii by Molmil
Cryo-EM KSB domain of RhiE from Burkholderia rhizoxinica
Descriptor: RhiE protein,Polyketide synthase domain protein RhiE
Authors:Capper, M.J, Koehnke, J.
Deposit date:2023-03-22
Release date:2024-04-03
Method:ELECTRON MICROSCOPY (2.84 Å)
Cite:Structural Analysis of a Chain-Branching Polyketide Synthase Module
To Be Published
2Q79
DownloadVisualize
BU of 2q79 by Molmil
Crystal Structure of single chain E2C from HPV16 with a 12aa linker for monomerization.
Descriptor: Regulatory protein E2, SULFATE ION
Authors:Freire, E.
Deposit date:2007-06-06
Release date:2007-10-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Increased Stability and DNA Site Discrimination of "Single Chain" Variants of the Dimeric beta-Barrel DNA Binding Domain of the Human Papillomavirus E2 Transcriptional Regulator.
Biochemistry, 46, 2007
8A82
DownloadVisualize
BU of 8a82 by Molmil
Fe(II)/aKG-dependent halogenase OocPQ
Descriptor: Cupin_8 domain-containing protein, FE (III) ION, GLYCEROL, ...
Authors:Fraley, A.E, Meoded, R.A, Schmalhofer, M, Bergande, C, Groll, M, Piel, J.
Deposit date:2022-06-21
Release date:2023-03-08
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Heterocomplex structure of a polyketide synthase component involved in modular backbone halogenation.
Structure, 31, 2023
5Y0A
DownloadVisualize
BU of 5y0a by Molmil
Cryo-EM structure of zika virus complexed with Fab of ZKA190 at pH 8.0 and 37 celsius degree
Descriptor: protein E, variable region of Fab ZKA190 heavy chain, variable region of Fab ZKA190 light chain
Authors:Wang, J.Q, Lok, S.M.
Deposit date:2017-07-15
Release date:2017-10-04
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (22 Å)
Cite:A Human Bi-specific Antibody against Zika Virus with High Therapeutic Potential.
Cell, 171, 2017
2HUJ
DownloadVisualize
BU of 2huj by Molmil
Crystal structure of a protein of uknown function (NP_471338.1) from Listeria innocua at 1.74 A resolution
Descriptor: Lin2004 protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2006-07-26
Release date:2006-08-08
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Crystal structures of MW1337R and lin2004: representatives of a novel protein family that adopt a four-helical bundle fold.
Proteins, 71, 2008
1DUS
DownloadVisualize
BU of 1dus by Molmil
MJ0882-A hypothetical protein from M. jannaschii
Descriptor: MJ0882
Authors:Hung, L, Huang, L, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2000-01-18
Release date:2000-07-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure-based experimental confirmation of biochemical function to a methyltransferase, MJ0882, from hyperthermophile Methanococcus jannaschii
J.STRUCT.FUNCT.GENOM., 2, 2002

 

12>

221371

PDB entries from 2024-06-19

PDB statisticsPDBj update infoContact PDBjnumon