Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6PYB
DownloadVisualize
BU of 6pyb by Molmil
Sex Hormone-binding globulin mutant E176K in complex with DVT
分子名称: 4,4'-[(3R,4R)-oxolane-3,4-diylbis(methylene)]bis(2-methoxyphenol), CALCIUM ION, Sex hormone-binding globulin
著者Round, P.W, Das, S, Van Petegem, F.
登録日2019-07-29
公開日2019-12-25
最終更新日2020-02-12
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Molecular interactions between sex hormone-binding globulin and nonsteroidal ligands that enhance androgen activity.
J.Biol.Chem., 295, 2020
2ZSD
DownloadVisualize
BU of 2zsd by Molmil
Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with Coenzyme A
分子名称: 1,2-ETHANEDIOL, COENZYME A, GLYCEROL, ...
著者Chetnani, B, Das, S, Kumar, P, Surolia, A, Vijayan, M.
登録日2008-09-05
公開日2009-07-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Mycobacterium tuberculosis pantothenate kinase: possible changes in location of ligands during enzyme action
Acta Crystallogr.,Sect.D, 65, 2009
2ZSA
DownloadVisualize
BU of 2zsa by Molmil
Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with ADP and Phosphopantothenate
分子名称: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, GLYCEROL, ...
著者Chetnani, B, Das, S, Kumar, P, Surolia, A, Vijayan, M.
登録日2008-09-04
公開日2009-07-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Mycobacterium tuberculosis pantothenate kinase: possible changes in location of ligands during enzyme action
Acta Crystallogr.,Sect.D, 65, 2009
2ZS7
DownloadVisualize
BU of 2zs7 by Molmil
Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with citrate anion
分子名称: CITRATE ANION, GLYCEROL, Pantothenate kinase, ...
著者Chetnani, B, Das, S, Kumar, P, Surolia, A, Vijayan, M.
登録日2008-09-03
公開日2009-07-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Mycobacterium tuberculosis pantothenate kinase: possible changes in location of ligands during enzyme action
Acta Crystallogr.,Sect.D, 65, 2009
2ZSB
DownloadVisualize
BU of 2zsb by Molmil
Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with ADP, obtained through soaking of native enzyme crystals with the ligand
分子名称: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, Pantothenate kinase
著者Chetnani, B, Das, S, Kumar, P, Surolia, A, Vijayan, M.
登録日2008-09-04
公開日2009-07-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Mycobacterium tuberculosis pantothenate kinase: possible changes in location of ligands during enzyme action
Acta Crystallogr.,Sect.D, 65, 2009
2ZSE
DownloadVisualize
BU of 2zse by Molmil
Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with AMPPCP and Pantothenate
分子名称: 1,2-ETHANEDIOL, CITRATE ANION, GLYCEROL, ...
著者Chetnani, B, Das, S, Kumar, P, Surolia, A, Vijayan, M.
登録日2008-09-05
公開日2009-07-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Mycobacterium tuberculosis pantothenate kinase: possible changes in location of ligands during enzyme action
Acta Crystallogr.,Sect.D, 65, 2009
2ZSF
DownloadVisualize
BU of 2zsf by Molmil
Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with ATP and ADP
分子名称: ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ...
著者Chetnani, B, Das, S, Kumar, P, Surolia, A, Vijayan, M.
登録日2008-09-05
公開日2009-07-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Mycobacterium tuberculosis pantothenate kinase: possible changes in location of ligands during enzyme action
Acta Crystallogr.,Sect.D, 65, 2009
2ZS9
DownloadVisualize
BU of 2zs9 by Molmil
Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with ADP and Pantothenate
分子名称: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, PANTOTHENOIC ACID, ...
著者Chetnani, B, Das, S, Kumar, P, Surolia, A, Vijayan, M.
登録日2008-09-04
公開日2009-07-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Mycobacterium tuberculosis pantothenate kinase: possible changes in location of ligands during enzyme action
Acta Crystallogr.,Sect.D, 65, 2009
2ZS8
DownloadVisualize
BU of 2zs8 by Molmil
Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) co-crystallized with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, Pantothenate kinase
著者Chetnani, B, Das, S, Kumar, P, Surolia, A, Vijayan, M.
登録日2008-09-03
公開日2009-07-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Mycobacterium tuberculosis pantothenate kinase: possible changes in location of ligands during enzyme action
Acta Crystallogr.,Sect.D, 65, 2009
4I4N
DownloadVisualize
BU of 4i4n by Molmil
Crystal Structure of the catalytic Cys to Ala mutant of VcHsp31 from Vibrio cholerae
分子名称: Intracellular protease/amidase
著者Sen, U, Das, S.
登録日2012-11-28
公開日2013-12-04
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Structural and Functional studies on Hsp31 of Vibrio cholere: Identification of a novel glutamate that attenuates the peptidase activity
To be Published
2MI1
DownloadVisualize
BU of 2mi1 by Molmil
Somatostatin-14 solution structure in 5% D-mannitol
分子名称: Somatostatin-14
著者Anoop, A, Ranganathan, S, Pratihar, S.
登録日2013-12-08
公開日2014-05-07
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献Elucidating the role of disulfide bond on amyloid formation and fibril reversibility of somatostatin-14: relevance to its storage and secretion.
J.Biol.Chem., 289, 2014
7TN2
DownloadVisualize
BU of 7tn2 by Molmil
Composite model of a Chd1-nucleosome complex in the nucleotide-free state derived from 2.3A and 2.7A Cryo-EM maps
分子名称: Chromo domain-containing protein 1, DNA Lagging Strand, DNA Tracking Strand, ...
著者Nodelman, I.M, Bowman, G.D, Armache, J.-P.
登録日2022-01-20
公開日2022-03-02
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献Nucleosome recognition and DNA distortion by the Chd1 remodeler in a nucleotide-free state.
Nat.Struct.Mol.Biol., 29, 2022
7SWY
DownloadVisualize
BU of 7swy by Molmil
2.6 A structure of a 40-601[TA-rich+1]-40 nucleosome
分子名称: DNA Guide Strand, DNA Tracking Strand, Histone H2A, ...
著者Nodelman, I.M, Bowman, G.D, Armache, J.-P.
登録日2021-11-21
公開日2022-03-02
最終更新日2023-03-29
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Nucleosome recognition and DNA distortion by the Chd1 remodeler in a nucleotide-free state.
Nat.Struct.Mol.Biol., 29, 2022
6CHZ
DownloadVisualize
BU of 6chz by Molmil
Estrogen Receptor Alpha Y537S bound to antagonist H3B-9224.
分子名称: 1,2-ETHANEDIOL, 4-[(2-{4-[(1E)-1-(1H-indazol-5-yl)-2-phenylbut-1-en-1-yl]phenoxy}ethyl)amino]-N,N-dimethylbutanamide, Estrogen receptor
著者Larsen, N.A.
登録日2018-02-23
公開日2018-03-21
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Discovery of Selective Estrogen Receptor Covalent Antagonists for the Treatment of ER alphaWTand ER alphaMUTBreast Cancer.
Cancer Discov, 8, 2018
6CHW
DownloadVisualize
BU of 6chw by Molmil
Estrogen Receptor Alpha Y537S covalently bound to antagonist H3B-5942.
分子名称: 1,2-ETHANEDIOL, 4-[(2-{4-[(1E)-1-(1H-indazol-5-yl)-2-phenylbut-1-en-1-yl]phenoxy}ethyl)amino]-N,N-dimethylbutanamide, DIMETHYL SULFOXIDE, ...
著者Larsen, N.A.
登録日2018-02-23
公開日2018-03-21
最終更新日2020-02-26
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Discovery of Selective Estrogen Receptor Covalent Antagonists for the Treatment of ER alphaWTand ER alphaMUTBreast Cancer.
Cancer Discov, 8, 2018
6YFY
DownloadVisualize
BU of 6yfy by Molmil
Solid-state NMR structure of the D-Arg4,L10-teixobactin - Lipid II complex in lipid bilayers.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-alpha-muramic acid, 3-methylbut-2-en-1-ol, D-Arg4,Leu10-Teixobactin, ...
著者Weingarth, M.H, Shukla, R.
登録日2020-03-26
公開日2020-06-10
最終更新日2023-11-15
実験手法SOLID-STATE NMR
主引用文献Mode of action of teixobactins in cellular membranes.
Nat Commun, 11, 2020
7DK1
DownloadVisualize
BU of 7dk1 by Molmil
Crystal structure of Zinc bound SARS-CoV-2 main protease
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3C-like proteinase, CHLORIDE ION, ...
著者Sonkar, K.S, Panchariya, L, Kuila, S, Khan, W.A, Arockiasamy, A.
登録日2020-11-22
公開日2021-06-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.902 Å)
主引用文献Zinc 2+ ion inhibits SARS-CoV-2 main protease and viral replication in vitro.
Chem.Commun.(Camb.), 57, 2021
6SDG
DownloadVisualize
BU of 6sdg by Molmil
Crystal structure of the DNA binding domain of M. polymorpha Auxin Response Factor 2 (MpARF2) in complex with High Affinity DNA
分子名称: 21-7_A, 21-7_B, Auxin response factor
著者Crespo, I, Weijers, D, Boer, D.R.
登録日2019-07-27
公開日2020-04-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.96 Å)
主引用文献Design principles of a minimal auxin response system.
Nat.Plants, 6, 2020
6WWB
DownloadVisualize
BU of 6wwb by Molmil
Crystal Structure of the second bromodomain of human BRD2 in complex with the compound 3b
分子名称: 1,2-ETHANEDIOL, 2-((S)-4-(4-chlorophenyl)-2,3,9-trimethyl-6H-thieno[3,2-f][1,2,4]triazolo[4,3-a][1,4]diazepin-6-yl)-N-((1-(4-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)amino)acetamido)butyl)-1H-1,2,3-triazol-4-yl)methyl)acetamide, Bromodomain-containing protein 2
著者White, S.W, Yun, M.
登録日2020-05-08
公開日2021-11-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.31 Å)
主引用文献Phenyl-Glutarimides: Alternative Cereblon Binders for the Design of PROTACs.
Angew.Chem.Int.Ed.Engl., 60, 2021
8P09
DownloadVisualize
BU of 8p09 by Molmil
48S late-stage initiation complex with non methylated mRNA
分子名称: 18S ribosomal RNA, 40S ribosomal protein S11, 40S ribosomal protein S12, ...
著者Guca, E, Lima, L.H.F, Boissier, F, Hashem, Y.
登録日2023-05-09
公開日2024-03-20
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献N 6 -methyladenosine in 5' UTR does not promote translation initiation.
Mol.Cell, 84, 2024
8P03
DownloadVisualize
BU of 8p03 by Molmil
48S late-stage initiation complex with m6A mRNA
分子名称: 18S ribosomal RNA, 40S ribosomal protein S11, 40S ribosomal protein S12, ...
著者Guca, E, Lima, L.H.F, Boissier, F, Hashem, Y.
登録日2023-05-09
公開日2024-03-20
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.04 Å)
主引用文献N 6 -methyladenosine in 5' UTR does not promote translation initiation.
Mol.Cell, 84, 2024
5XLW
DownloadVisualize
BU of 5xlw by Molmil
Mycobacterium tuberculosis Pantothenate kinase mutant F247A/F254A
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, PENTAETHYLENE GLYCOL, ...
著者Paul, A, Kumar, P, Surolia, A, Vijayan, M.
登録日2017-05-11
公開日2018-05-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Biochemical and structural studies of mutants indicate concerted movement of the dimer interface and ligand-binding region of Mycobacterium tuberculosis pantothenate kinase
Acta Crystallogr F Struct Biol Commun, 73, 2017
5XLV
DownloadVisualize
BU of 5xlv by Molmil
Mycobacterium tuberculosis Pantothenate kinase mutant F254A
分子名称: 1,2-ETHANEDIOL, GLYCEROL, Pantothenate kinase, ...
著者Paul, A, Kumar, P, Surolia, A, Vijayan, M.
登録日2017-05-11
公開日2018-05-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Biochemical and structural studies of mutants indicate concerted movement of the dimer interface and ligand-binding region of Mycobacterium tuberculosis pantothenate kinase
Acta Crystallogr F Struct Biol Commun, 73, 2017
5YIY
DownloadVisualize
BU of 5yiy by Molmil
Crystal structure of D175A mutant of Rv3272 from Mycobacterium tuberculosis
分子名称: CHLORIDE ION, CoA transferase
著者Karade, S.S, Pratap, J.V.
登録日2017-10-06
公開日2018-11-07
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.504 Å)
主引用文献Rv3272 encodes a novel Family III CoA transferase that alters the cell wall lipid profile and protects mycobacteria from acidic and oxidative stress.
Biochim Biophys Acta Proteins Proteom, 1867, 2019
5YIT
DownloadVisualize
BU of 5yit by Molmil
Crystal Structure of Hypothetical protein (Rv3272) from Mycobacterium tuberculosis
分子名称: CoA transferase III
著者Karade, S.S, Pratap, J.V.
登録日2017-10-06
公開日2018-11-07
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Rv3272 encodes a novel Family III CoA transferase that alters the cell wall lipid profile and protects mycobacteria from acidic and oxidative stress.
Biochim Biophys Acta Proteins Proteom, 1867, 2019

219869

件を2024-05-15に公開中

PDB statisticsPDBj update infoContact PDBjnumon