Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2RVP
DownloadVisualize
BU of 2rvp by Molmil
Solution structure of DNA Containing Metallo-Base-Pair
Descriptor: DNA (5'-D(*TP*AP*AP*TP*AP*TP*AP*CP*TP*TP*AP*AP*TP*TP*A)-3'), DNA (5'-D(*TP*AP*AP*TP*TP*AP*AP*CP*TP*AP*TP*AP*TP*TP*A)-3'), SILVER ION
Authors:Dairaku, T, Furuita, K, Sato, H, Sebera, J, Nakashima, K, Kondo, J, Yamanaka, D, Kondo, Y, Okamoto, I, Ono, A, Sychrovsky, V, Kojima, C, Tanaka, Y.
Deposit date:2016-03-22
Release date:2016-08-31
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure Determination of an Ag(I) -Mediated Cytosine-Cytosine Base Pair within DNA Duplex in Solution with (1) H/(15) N/(109) Ag NMR Spectroscopy.
Chemistry, 22, 2016
5IX7
DownloadVisualize
BU of 5ix7 by Molmil
Crystal structure of metallo-DNA nanowire with infinite one-dimensional silver array
Descriptor: DNA (5'-D(*GP*GP*AP*CP*TP*(CBR)P*GP*AP*CP*TP*CP*C)-3'), POTASSIUM ION, SILVER ION
Authors:Kondo, J, Tada, Y, Dairaku, T, Hattori, Y, Saneyoshi, H, Ono, A, Tanaka, Y.
Deposit date:2016-03-23
Release date:2017-07-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.398 Å)
Cite:A metallo-DNA nanowire with uninterrupted one-dimensional silver array
Nat Chem, 9, 2017
2RT8
DownloadVisualize
BU of 2rt8 by Molmil
Structure of metallo-dna in solution
Descriptor: DNA (5'-D(*CP*GP*CP*GP*TP*TP*GP*TP*CP*C)-3'), DNA (5'-D(*GP*GP*AP*CP*TP*TP*CP*GP*CP*G)-3'), MERCURY (II) ION
Authors:Yamaguchi, H, Sebera, J, Kondo, J, Oda, S, Komuro, T, Kawamura, T, Dairaku, T, Kondo, Y, Okamoto, I, Ono, A, Burda, J.V, Kojima, C, Sychrovsky, V, Tanaka, Y.
Deposit date:2013-06-18
Release date:2014-03-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The structure of metallo-DNA with consecutive thymine-HgII-thymine base pairs explains positive entropy for the metallo base pair formation.
Nucleic Acids Res., 42, 2014
5AY2
DownloadVisualize
BU of 5ay2 by Molmil
Crystal structure of RNA duplex containing C-Ag(I)-C base pairs
Descriptor: RNA (5'-R(*GP*GP*AP*CP*UP*(CBR)P*GP*AP*CP*UP*CP*C)-3'), SILVER ION
Authors:Kondo, J, Tada, Y, Dairaku, T, Saneyoshi, H, Okamoto, I, Tanaka, Y, Ono, A.
Deposit date:2015-08-06
Release date:2015-10-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:High-Resolution Crystal Structure of a Silver(I)-RNA Hybrid Duplex Containing Watson-Crick-like CSilver(I)C Metallo-Base Pairs
Angew.Chem.Int.Ed.Engl., 54, 2015
5AY3
DownloadVisualize
BU of 5ay3 by Molmil
Crystal structure of RNA duplex containing C-C base pairs
Descriptor: RNA (5'-R(*GP*GP*AP*CP*UP*(CBR)P*GP*A*CP*UP*CP*C)-3')
Authors:Kondo, J, Tada, Y, Dairaku, T, Saneyoshi, H, Okamoto, I, Tanaka, Y, Ono, A.
Deposit date:2015-08-06
Release date:2015-10-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:High-Resolution Crystal Structure of a Silver(I)-RNA Hybrid Duplex Containing Watson-Crick-like CSilver(I)C Metallo-Base Pairs
Angew.Chem.Int.Ed.Engl., 54, 2015
5AY4
DownloadVisualize
BU of 5ay4 by Molmil
Crystal structure of RNA duplex containing C-C base pairs obtained in the presence of Hg(II)
Descriptor: RNA (5'-R(*GP*GP*AP*CP*UP*(CBR)P*GP*AP*CP*UP*CP*C)-3'), SODIUM ION
Authors:Kondo, J, Tada, Y, Dairaku, T, Saneyoshi, H, Okamoto, I, Tanaka, Y, Ono, A.
Deposit date:2015-08-06
Release date:2015-10-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:High-Resolution Crystal Structure of a Silver(I)-RNA Hybrid Duplex Containing Watson-Crick-like CSilver(I)C Metallo-Base Pairs
Angew.Chem.Int.Ed.Engl., 54, 2015
6IYQ
DownloadVisualize
BU of 6iyq by Molmil
Crystal structure of a DNA duplex cross-linked by 6-thioguanine-6-thioguanine disulfides
Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*(S6G)P*(S6G)P*(BRU)P*CP*GP*CP*G)-3')
Authors:Kondo, J, Ono, A, Atsugi, T.
Deposit date:2018-12-17
Release date:2019-10-30
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Crystal structure of a DNA duplex cross-linked by 6-thioguanine-6-thioguanine disulfides: reversible formation and cleavage catalyzed by Cu(II) ion and glutathione
Rsc Adv, 2019

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon