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6UGJ
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BU of 6ugj by Molmil
Crystal structure of a fragment of E. coli tRNA(Asp) consisting of its acceptor stem/T stem-loop. Short unit cell.
Descriptor: DIPHOSPHATE, SULFATE ION, URACIL, ...
Authors:Chan, C.W, Mondragon, A.
Deposit date:2019-09-26
Release date:2020-01-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of an unmodified bacterial tRNA reveal intrinsic structural flexibility and plasticity as general properties of unbound tRNAs.
Rna, 26, 2020
6UGG
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BU of 6ugg by Molmil
Structure of unmodified E. coli tRNA(Asp)
Descriptor: tRNAasp
Authors:Chan, C.W, Mondragon, A.
Deposit date:2019-09-26
Release date:2020-01-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structures of an unmodified bacterial tRNA reveal intrinsic structural flexibility and plasticity as general properties of unbound tRNAs.
Rna, 26, 2020
6UGI
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BU of 6ugi by Molmil
Crystal structure of a fragment of E. coli tRNA(Asp) consisting of its acceptor stem/T stem-loop. Long unit cell.
Descriptor: SULFATE ION, tRNA(Asp) acceptor stem/T stem-loop
Authors:Chan, C.W, Mondragon, A.
Deposit date:2019-09-26
Release date:2020-01-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structures of an unmodified bacterial tRNA reveal intrinsic structural flexibility and plasticity as general properties of unbound tRNAs.
Rna, 26, 2020
6VMY
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BU of 6vmy by Molmil
Structure of the B. subtilis cobalamin riboswitch
Descriptor: Adenosylcobalamin, B. subtilis cobalamin riboswitch, COBALT HEXAMMINE(III), ...
Authors:Chan, C.W, Mondragon, A.
Deposit date:2020-01-28
Release date:2020-06-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Crystal structure of an atypical cobalamin riboswitch reveals RNA structural adaptability as basis for promiscuous ligand binding.
Nucleic Acids Res., 48, 2020
6CWX
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BU of 6cwx by Molmil
Crystal structure of human ribonuclease P/MRP proteins Rpp20/Rpp25
Descriptor: FORMIC ACID, Ribonuclease P protein subunit p20, Ribonuclease P protein subunit p25, ...
Authors:Chan, C.W, Kiesel, B.R, Mondragon, A.
Deposit date:2018-03-31
Release date:2018-04-18
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal Structure of Human Rpp20/Rpp25 Reveals Quaternary Level Adaptation of the Alba Scaffold as Structural Basis for Single-stranded RNA Binding.
J. Mol. Biol., 430, 2018
7LJP
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BU of 7ljp by Molmil
Structure of Thermotoga maritima SmpB
Descriptor: 1,4-DIETHYLENE DIOXIDE, GLYCEROL, SULFATE ION, ...
Authors:Chan, C.W, Mondragon, A.
Deposit date:2021-01-29
Release date:2022-02-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of Thermotoga maritima SmpB reveals its C-terminal tail domain in a helical conformation mimicking that of a ribosome-bound state
To Be Published
4ZQA
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BU of 4zqa by Molmil
Crystal Structure of the Sds3 Dimerization Domain
Descriptor: Sin3 histone deacetylase corepressor complex component SDS3
Authors:Chan, C.W, Mondragon, A, Clark, M, Radhakrishnan, I.
Deposit date:2015-05-08
Release date:2015-07-15
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural insights into the assembly of the histone deacetylase-associated Sin3L/Rpd3L corepressor complex.
Proc.Natl.Acad.Sci.USA, 112, 2015
1XGE
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BU of 1xge by Molmil
Dihydroorotase from Escherichia coli: Loop Movement and Cooperativity between subunits
Descriptor: (4S)-2,6-DIOXOHEXAHYDROPYRIMIDINE-4-CARBOXYLIC ACID, Dihydroorotase, N-CARBAMOYL-L-ASPARTATE, ...
Authors:Lee, M, Chan, C.W, Guss, J.M, Christopherson, R.I, Maher, M.J.
Deposit date:2004-09-17
Release date:2005-04-26
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Dihydroorotase from Escherichia coli: Loop Movement and Cooperativity between Subunits
J.Mol.Biol., 348, 2005
5D90
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BU of 5d90 by Molmil
Crystal structure of HiNmlR, a MerR family regulator lacking the sensor domain, bound to promoter DNA
Descriptor: MerR family regulator protein
Authors:Counago, R.M, Chang, C.W, Kobe, B.
Deposit date:2015-08-18
Release date:2016-06-29
Last modified:2016-08-31
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis of thiol-based regulation of formaldehyde detoxification in H. influenzae by a MerR regulator with no sensor region.
Nucleic Acids Res., 44, 2016
5D8C
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BU of 5d8c by Molmil
Crystal structure of HiNmlR, a MerR family regulator lacking the sensor domain, bound to promoter DNA
Descriptor: DNA (5'-D(*CP*TP*TP*AP*GP*AP*GP*TP*GP*AP*AP*CP*TP*CP*TP*AP*AP*G)-3'), DNA (5'-D(*CP*TP*TP*AP*GP*AP*GP*TP*TP*CP*AP*CP*TP*CP*TP*AP*AP*G)-3'), MerR family regulator protein
Authors:Counago, R.M, Chang, C.W, Chen, N.H, Djoko, K.Y, McEwan, A.G, Kobe, B.
Deposit date:2015-08-17
Release date:2016-06-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural basis of thiol-based regulation of formaldehyde detoxification in H. influenzae by a MerR regulator with no sensor region.
Nucleic Acids Res., 44, 2016
5E01
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BU of 5e01 by Molmil
Crystal structure of HiNmlR, a MerR family regulator lacking the sensor domain, bound to palyndromic promoter DNA
Descriptor: 5'-D(*CP*TP*TP*AP*GP*AP*GP*TP*GP*CP*AP*CP*TP*CP*TP*AP*AP*G)-3', Uncharacterized HTH-type transcriptional regulator HI_0186
Authors:Counago, R.M, Chang, C.W, Chen, N.H, Djoko, K.Y, McEwan, A.G, Kobe, B.
Deposit date:2015-09-26
Release date:2016-06-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis of thiol-based regulation of formaldehyde detoxification in H. influenzae by a MerR regulator with no sensor region.
Nucleic Acids Res., 44, 2016
4BZ1
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BU of 4bz1 by Molmil
Structure of dengue virus EDIII in complex with Fab 3e31
Descriptor: CHLORIDE ION, ENVELOPE PROTEIN, FAB 3E31 HEAVY CHAIN, ...
Authors:Li, J, Watterson, D, Chang, C.W, Li, X.Q, Ericsson, D.J, Qiu, L.W, Cai, J.P, Chen, J, Fry, S.R, Cooper, M.A, Che, X.Y, Young, P.R, Kobe, B.
Deposit date:2013-07-23
Release date:2014-08-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure of Dengue Virus Ediii in Complex with Fab 3E31
To be Published
4BZ2
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BU of 4bz2 by Molmil
Structure of dengue virus EDIII in complex with Fab 2D73
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ENVELOPE PROTEIN, ...
Authors:Li, J, Watterson, D, Chang, C.W, Li, X.Q, Ericsson, D.J, Qiu, L.W, Cai, J.P, Chen, J, Fry, S.R, Cooper, M.A, Che, X.Y, Young, P.R, Kobe, B.
Deposit date:2013-07-23
Release date:2014-08-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structure of Dengue Virus Ediii in Complex with Fab 2D73
To be Published
4ZM1
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BU of 4zm1 by Molmil
Shigella flexneri lipopolysaccharide O-antigen chain-length regulator WzzBSF - wild type
Descriptor: CITRIC ACID, Chain length determinant protein, MAGNESIUM ION
Authors:Ericsson, D.J, Chang, C.-W, Lonhienne, T, Casey, L, Benning, F, Kobe, B, Tran, E.N.H, Morona, R.
Deposit date:2015-05-02
Release date:2016-03-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural and Biochemical Analysis of a Single Amino-Acid Mutant of WzzBSF That Alters Lipopolysaccharide O-Antigen Chain Length in Shigella flexneri.
Plos One, 10, 2015
4ZM5
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BU of 4zm5 by Molmil
Shigella flexneri lipopolysaccharide O-antigen chain-length regulator WzzBSF - A107P mutant
Descriptor: CHLORIDE ION, Chain length determinant protein, MAGNESIUM ION
Authors:Ericsson, D.J, Chang, C.-W, Lonhienne, T, Casey, L, Benning, F, Kobe, B, Tran, E.N.H, Morona, R.
Deposit date:2015-05-02
Release date:2016-03-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Structural and Biochemical Analysis of a Single Amino-Acid Mutant of WzzBSF That Alters Lipopolysaccharide O-Antigen Chain Length in Shigella flexneri.
Plos One, 10, 2015
2EG8
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BU of 2eg8 by Molmil
The crystal structure of E. coli dihydroorotase complexed with 5-fluoroorotic acid
Descriptor: 5-FLUORO-2,6-DIOXO-1,2,3,6-TETRAHYDROPYRIMIDINE-4-CARBOXYLIC ACID, Dihydroorotase, ZINC ION
Authors:Lee, M, Maher, M.J, Guss, J.M.
Deposit date:2007-02-28
Release date:2007-07-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of Ligand-free and Inhibitor Complexes of Dihydroorotase from Escherichia coli: Implications for Loop Movement in Inhibitor Design
J.Mol.Biol., 370, 2007
2EG6
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BU of 2eg6 by Molmil
The crystal structure of the ligand-free dihydroorotase from E. coli
Descriptor: Dihydroorotase, ZINC ION
Authors:Lee, M, Maher, M.J, Guss, J.M.
Deposit date:2007-02-28
Release date:2007-07-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structures of Ligand-free and Inhibitor Complexes of Dihydroorotase from Escherichia coli: Implications for Loop Movement in Inhibitor Design
J.Mol.Biol., 370, 2007
2EG7
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BU of 2eg7 by Molmil
The crystal structure of E. coli dihydroorotase complexed with HDDP
Descriptor: 2-OXO-1,2,3,6-TETRAHYDROPYRIMIDINE-4,6-DICARBOXYLIC ACID, Dihydroorotase, ZINC ION
Authors:Lee, M, Maher, M.J, Guss, J.M.
Deposit date:2007-02-28
Release date:2007-07-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of Ligand-free and Inhibitor Complexes of Dihydroorotase from Escherichia coli: Implications for Loop Movement in Inhibitor Design
J.Mol.Biol., 370, 2007
3P0U
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BU of 3p0u by Molmil
Crystal Structure of the ligand binding domain of human testicular receptor 4
Descriptor: Nuclear receptor subfamily 2 group C member 2
Authors:Zhou, X.E, Suino-Powell, K.M, Xu, Y, Chan, C.-W, Kruse, S.W, Reynolds, R, Engel, J.D, Xu, H.E.
Deposit date:2010-09-29
Release date:2010-11-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:The Orphan Nuclear Receptor TR4 Is a Vitamin A-activated Nuclear Receptor.
J.Biol.Chem., 286, 2011
8KCM
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BU of 8kcm by Molmil
MmCPDII-DNA complex containing low-dosage, light induced repaired DNA.
Descriptor: Deoxyribodipyrimidine photo-lyase, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
Authors:Maestre-Reyna, M, Wang, P.-H, Nango, E, Hosokawa, Y, Saft, M, Furrer, A, Yang, C.-H, Ngura Putu, E.P.G, Wu, W.-J, Emmerich, H.-J, Engilberge, S, Caramello, N, Wranik, M, Glover, H.L, Franz-Badur, S, Wu, H.-Y, Lee, C.-C, Huang, W.-C, Huang, K.-F, Chang, Y.-K, Liao, J.-H, Weng, J.-H, Gad, W, Chang, C.-W, Pang, A.H, Gashi, D, Beale, E, Ozerov, D, Milne, C, Cirelli, C, Bacellar, C, Sugahara, M, Owada, S, Joti, Y, Yamashita, A, Tanaka, R, Tanaka, T, Luo, F.J, Tono, K, Kiontke, S, Spadaccini, R, Royant, A, Yamamoto, J, Iwata, S, Standfuss, J, Essen, L.-O, Bessho, Y, Tsai, M.-D.
Deposit date:2023-08-08
Release date:2023-11-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Visualizing the DNA repair process by a photolyase at atomic resolution.
Science, 382, 2023
8IO9
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BU of 8io9 by Molmil
Cryo-EM structure of cyanobacteria phosphoketolase complexed with AMPPNP in dodecameric assembly
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Probable phosphoketolase, ...
Authors:Chang, C.-W, Tsai, M.-D.
Deposit date:2023-03-10
Release date:2023-06-28
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.36 Å)
Cite:An ATP-sensitive phosphoketolase regulates carbon fixation in cyanobacteria.
Nat Metab, 5, 2023
8IOA
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BU of 8ioa by Molmil
Cryo-EM structure of cyanobacteria phosphoketolase
Descriptor: MAGNESIUM ION, Probable phosphoketolase, THIAMINE DIPHOSPHATE
Authors:Chang, C.-W, Tsai, M.-D.
Deposit date:2023-03-10
Release date:2023-06-28
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.63 Å)
Cite:An ATP-sensitive phosphoketolase regulates carbon fixation in cyanobacteria.
Nat Metab, 5, 2023
8IO7
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BU of 8io7 by Molmil
Cryo-EM structure of phosphoketolase from Bifidobacterium longum in dimeric assembly
Descriptor: MAGNESIUM ION, THIAMINE DIPHOSPHATE, Xylulose5phosphatefructose6phosphate phosphoketolase
Authors:Chang, C.-W, Tsai, M.-D.
Deposit date:2023-03-10
Release date:2023-06-28
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.62 Å)
Cite:An ATP-sensitive phosphoketolase regulates carbon fixation in cyanobacteria.
Nat Metab, 5, 2023
8IO6
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BU of 8io6 by Molmil
Cryo-EM structure of phosphoketolase from Bifidobacterium longum in octameric assembly
Descriptor: MAGNESIUM ION, THIAMINE DIPHOSPHATE, Xylulose5phosphatefructose6phosphate phosphoketolase
Authors:Chang, C.-W, Tsai, M.-D.
Deposit date:2023-03-10
Release date:2023-06-28
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.68 Å)
Cite:An ATP-sensitive phosphoketolase regulates carbon fixation in cyanobacteria.
Nat Metab, 5, 2023
8IO8
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BU of 8io8 by Molmil
Cryo-EM structure of cyanobacteria phosphoketolase complexed with AMPPNPin dimeric assembly
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Probable phosphoketolase, ...
Authors:Chang, C.-W, Tsai, M.-D.
Deposit date:2023-03-10
Release date:2023-06-28
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.17 Å)
Cite:An ATP-sensitive phosphoketolase regulates carbon fixation in cyanobacteria.
Nat Metab, 5, 2023

 

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