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6XH0
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BU of 6xh0 by Molmil
Co-crystal structure of HIV-1 TAR RNA in complex with lab-evolved RRM TBP6.9
Descriptor: MAGNESIUM ION, TAR binding protein 6.9, TRANS-ACTIVATION RESPONSE ELEMENT
Authors:Chavali, S.S, Jenkins, J.L, Wedekind, J.E.
Deposit date:2020-06-18
Release date:2020-10-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Co-crystal structures of HIV TAR RNA bound to lab-evolved proteins show key roles for arginine relevant to the design of cyclic peptide TAR inhibitors.
J.Biol.Chem., 295, 2020
6XH3
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BU of 6xh3 by Molmil
Co-crystal structure of HIV-1 TAR RNA in complex with lab-evolved RRM TBP6.3
Descriptor: TAR BINDING PROTEIN TBP 6.3, TRANS-ACTIVATION RESPONSE ELEMENT
Authors:Chavali, S.S, Jenkins, J.L, Wedekind, J.E.
Deposit date:2020-06-18
Release date:2020-10-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.353 Å)
Cite:Co-crystal structures of HIV TAR RNA bound to lab-evolved proteins show key roles for arginine relevant to the design of cyclic peptide TAR inhibitors.
J.Biol.Chem., 295, 2020
6XH2
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BU of 6xh2 by Molmil
Co-crystal structure of HIV-1 TAR RNA in complex with lab-evolved RRM 6.6
Descriptor: TAR-BINDING PROTEIN 6.6, TRANS-ACTIVATION RESPONSE ELEMENT
Authors:Chavali, S.S, Jenkins, J.L, Wedekind, J.E.
Deposit date:2020-06-18
Release date:2020-10-14
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Co-crystal structures of HIV TAR RNA bound to lab-evolved proteins show key roles for arginine relevant to the design of cyclic peptide TAR inhibitors.
J.Biol.Chem., 295, 2020
8UXW
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BU of 8uxw by Molmil
Arp2/3 branch junction complex, ADP state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Actin, ...
Authors:Chavali, S.S, Chou, S.Z, Sindelar, C.V.
Deposit date:2023-11-11
Release date:2024-01-31
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Cryo-EM structures reveal how phosphate release from Arp3 weakens actin filament branches formed by Arp2/3 complex.
Nat Commun, 15, 2024
8UXX
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BU of 8uxx by Molmil
Arp2/3 branch junction complex, BeFx state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Actin, ...
Authors:Chavali, S.S, Chou, S.Z, Sindelar, C.V.
Deposit date:2023-11-11
Release date:2024-01-31
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structures reveal how phosphate release from Arp3 weakens actin filament branches formed by Arp2/3 complex.
Nat Commun, 15, 2024
8UZ0
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BU of 8uz0 by Molmil
Straight actin filament from Arp2/3 branch junction sample (ADP)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Chavali, S.S, Chou, S.Z, Sindelar, C.V.
Deposit date:2023-11-14
Release date:2024-01-31
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Cryo-EM structures reveal how phosphate release from Arp3 weakens actin filament branches formed by Arp2/3 complex.
Nat Commun, 15, 2024
8UZ1
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BU of 8uz1 by Molmil
Straight actin filament from Arp2/3 branch junction sample (ADP-BeFx)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Chavali, S.S, Chou, S.Z, Sindelar, C.V.
Deposit date:2023-11-14
Release date:2024-01-31
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Cryo-EM structures reveal how phosphate release from Arp3 weakens actin filament branches formed by Arp2/3 complex.
Nat Commun, 15, 2024
3K1J
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BU of 3k1j by Molmil
Crystal structure of Lon protease from Thermococcus onnurineus NA1
Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Cha, S.S, An, Y.J.
Deposit date:2009-09-28
Release date:2010-09-22
Last modified:2014-02-12
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of Lon protease: molecular architecture of gated entry to a sequestered degradation chamber
Embo J., 29, 2010
6XH1
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BU of 6xh1 by Molmil
Co-crystal structure of HIV-1 TAR RNA in complex with lab-evolved RRM TBP6.7 mutant
Descriptor: TAR binding protein mutant 6.7 Q48R/T50R, TRANS-ACTIVATION RESPONSE ELEMENT
Authors:Chavali, S.S, Jenkins, J.L, Wedekind, J.E.
Deposit date:2020-06-18
Release date:2020-10-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:Co-crystal structures of HIV TAR RNA bound to lab-evolved proteins show key roles for arginine relevant to the design of cyclic peptide TAR inhibitors.
J.Biol.Chem., 295, 2020
3BWE
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BU of 3bwe by Molmil
Crystal structure of aggregated form of DJ1
Descriptor: PHOSPHATE ION, Protein DJ-1
Authors:Cha, S.S.
Deposit date:2008-01-09
Release date:2008-10-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of filamentous aggregates of human DJ-1 formed in an inorganic phosphate-dependent manner.
J.Biol.Chem., 283, 2008
4QDI
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BU of 4qdi by Molmil
Crystal structure II of MurF from Acinetobacter baumannii
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:An, Y.J, Jeong, C.S, Cha, S.S.
Deposit date:2014-05-13
Release date:2015-04-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:ATP-binding mode including a carbamoylated lysine and two Mg(2+) ions, and substrate-binding mode in Acinetobacter baumannii MurF
Biochem.Biophys.Res.Commun., 450, 2014
4QF5
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BU of 4qf5 by Molmil
Crystal structure I of MurF from Acinetobacter baumannii
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
Authors:An, Y.J, Jeong, C.S, Cha, S.S.
Deposit date:2014-05-19
Release date:2015-04-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:ATP-binding mode including a carbamoylated lysine and two Mg(2+) ions, and substrate-binding mode in Acinetobacter baumannii MurF
Biochem.Biophys.Res.Commun., 450, 2014
5GMX
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BU of 5gmx by Molmil
Crystal structure of a family VIII carboxylesterase
Descriptor: Carboxylesterase, phenylmethanesulfonic acid
Authors:An, Y.J, Cha, S.S.
Deposit date:2016-07-18
Release date:2017-07-26
Last modified:2019-02-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of EstSRT1, a family VIII carboxylesterase displaying hydrolytic activity toward oxyimino cephalosporins
Biochem. Biophys. Res. Commun., 478, 2016
3MVE
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BU of 3mve by Molmil
Crystal structure of a novel pyruvate decarboxylase
Descriptor: 1,2-ETHANEDIOL, SULFATE ION, UPF0255 protein VV1_0328
Authors:Cha, S.S, Jeong, C.S, An, Y.J.
Deposit date:2010-05-04
Release date:2011-05-18
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:FrsA functions as a cofactor-independent decarboxylase to control metabolic flux.
Nat.Chem.Biol., 7, 2011
4DWZ
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BU of 4dwz by Molmil
Crystal Structure of Ton_0340
Descriptor: Hypothetical protein TON_0340, ZINC ION
Authors:Lee, S.G, Lee, K.H, Cha, S.S, Oh, B.H.
Deposit date:2012-02-27
Release date:2013-01-16
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Experimental phasing using zinc anomalous scattering
Acta Crystallogr.,Sect.D, 68, 2012
4DT3
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BU of 4dt3 by Molmil
Crystal structure of zinc-charged lysozyme
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ...
Authors:An, Y.J, Jeong, C.S, Cha, S.S.
Deposit date:2012-02-20
Release date:2012-09-12
Last modified:2013-07-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Experimental phasing using zinc anomalous scattering
Acta Crystallogr.,Sect.D, 68, 2012
4FC5
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BU of 4fc5 by Molmil
Crystal Structure of Ton_0340
Descriptor: Putative uncharacterized protein, ZINC ION
Authors:Lee, S.G, Lee, K.H, An, Y.J, Cha, S.S, Oh, B.H.
Deposit date:2012-05-24
Release date:2012-09-12
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Experimental phasing using zinc anomalous scattering
Acta Crystallogr.,Sect.D, 68, 2012
1ZKJ
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BU of 1zkj by Molmil
Structural Basis for the Extended Substrate Spectrum of CMY-10, a Plasmid-Encoded Class C beta-lactamase
Descriptor: ACETIC ACID, ZINC ION, extended-spectrum beta-lactamase
Authors:Cha, S.S, Jung, H.I, An, Y.J, Lee, S.H.
Deposit date:2005-05-03
Release date:2006-04-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural basis for the extended substrate spectrum of CMY-10, a plasmid-encoded class C beta-lactamase.
Mol.Microbiol., 60, 2006
4RMF
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BU of 4rmf by Molmil
Biochemical and structural characterization of mycobacterial aspartyl-tRNA synthetase AspS, a promising TB drug target
Descriptor: 2,2-bis(hydroxymethyl)propane-1,3-diol, Aspartate--tRNA(Asp/Asn) ligase, FORMIC ACID
Authors:Cox, J.A.G, Gurcha, S.S, Veeraraghavan, U, Besra, G.S, Futterer, K.
Deposit date:2014-10-21
Release date:2014-11-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Biochemical and Structural Characterization of Mycobacterial Aspartyl-tRNA Synthetase AspS, a Promising TB Drug Target.
Plos One, 9, 2014
3BP3
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BU of 3bp3 by Molmil
Crystal structure of EIIB
Descriptor: Glucose-specific phosphotransferase enzyme IIB component, SULFATE ION
Authors:Cha, S.S, Jung, H.I, An, Y.J.
Deposit date:2007-12-18
Release date:2008-11-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Analyses of Mlc-IIBGlc interaction and a plausible molecular mechanism of Mlc inactivation by membrane sequestration.
Proc.Natl.Acad.Sci.Usa, 105, 2008
1IZZ
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BU of 1izz by Molmil
Crystal structure of Hsp31
Descriptor: Hsp31
Authors:Cha, S.S, Lee, S.J.
Deposit date:2002-10-16
Release date:2003-10-16
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Crystal structures of human DJ-1 and Escherichia coli Hsp31, which share an evolutionarily conserved domain
J.Biol.Chem., 278, 2003
1K41
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BU of 1k41 by Molmil
Crystal structure of KSI Y57S mutant
Descriptor: Ketosteroid Isomerase
Authors:Cha, S.S, Oh, B.H, Nam, G.H, Jang, D.S, Lee, T.H, Choi, K.Y.
Deposit date:2001-10-05
Release date:2002-10-16
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Maintenance of alpha-helical structures by phenyl rings in the active-site tyrosine triad contributes to catalysis and stability of ketosteroid isomerase from Pseudomonas putida biotype B
Biochemistry, 40, 2001
1J42
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BU of 1j42 by Molmil
Crystal Structure of Human DJ-1
Descriptor: RNA-binding protein regulatory subunit
Authors:Cha, S.S.
Deposit date:2003-02-26
Release date:2004-02-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of human DJ-1 and Escherichia coli Hsp31, which share an evolutionarily conserved domain.
J.Biol.Chem., 278, 2003
1IZY
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BU of 1izy by Molmil
Crystal structure of Hsp31
Descriptor: Hsp31
Authors:Cha, S.S, Lee, S.J.
Deposit date:2002-10-16
Release date:2003-10-16
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structures of human DJ-1 and Escherichia coli Hsp31, which share an evolutionarily conserved domain
J.Biol.Chem., 278, 2003
6M5Q
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BU of 6m5q by Molmil
A class C beta-lactamase mutant - Y150F
Descriptor: (5R)-5-[(1S,2R)-1-formyl-2-hydroxypropyl]-3-[(2-{[(E)-iminomethyl]amino}ethyl)sulfanyl]-4,5-dihydro-1H-pyrrole-2-carbox ylic acid, Beta-lactamase
Authors:Bae, D.W, Jung, Y.E, Cha, S.S.
Deposit date:2020-03-11
Release date:2021-01-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Novel inhibition mechanism of carbapenems on the ACC-1 class C beta-lactamase.
Arch.Biochem.Biophys., 693, 2020

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PDB entries from 2024-07-17

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