Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6H1C
DownloadVisualize
BU of 6h1c by Molmil
Structure of Ferric uptake regulator from Pseudomonas aeruginosa with manganese.
Descriptor: Ferric uptake regulation protein, MANGANESE (II) ION, ZINC ION
Authors:Nader, S, Perard, J, Carpentier, P, Michaud-Soret, I, Crouzy, S.
Deposit date:2018-07-11
Release date:2019-07-31
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Ferric uptake regulator with Mn and Zn form Pseudomonas aeruginosa
To Be Published
6HK5
DownloadVisualize
BU of 6hk5 by Molmil
X-ray structure of a truncated mutant of the metallochaperone CooJ with a high-affinity nickel-binding site
Descriptor: 3,3',3''-phosphoryltripropanoic acid, CALCIUM ION, CHLORIDE ION, ...
Authors:Alfano, M, Perard, J, Basset, C, Carpentier, P, Zambelli, B, Timm, J, Crouzy, S, Ciurli, S, Cavazza, C.
Deposit date:2018-09-05
Release date:2019-03-27
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (2.042 Å)
Cite:The carbon monoxide dehydrogenase accessory protein CooJ is a histidine-rich multidomain dimer containing an unexpected Ni(II)-binding site.
J.Biol.Chem., 294, 2019
5O17
DownloadVisualize
BU of 5o17 by Molmil
Crystal structure of murine neuroglobin under 100 bar krypton
Descriptor: KRYPTON, Neuroglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Colloc'h, N, Prange, T, Vallone, B, Carpentier, P.
Deposit date:2017-05-18
Release date:2017-11-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Mapping Hydrophobic Tunnels and Cavities in Neuroglobin with Noble Gas under Pressure.
Biophys. J., 113, 2017
7PWN
DownloadVisualize
BU of 7pwn by Molmil
URATE OXYDASE AZA-XANTHINE COMPLEX AT 1000 BARS (100 MPa) OF ARGON
Descriptor: 8-AZAXANTHINE, ARGON, SODIUM ION, ...
Authors:Prange, T, Colloc'h, N, Carpentier, P.
Deposit date:2021-10-07
Release date:2022-02-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Comparative study of the effects of high hydrostatic pressure per se and high argon pressure on urate oxidase ligand stabilization
Acta Cryst. D, 78, 2022
7Q09
DownloadVisualize
BU of 7q09 by Molmil
URATE OXIDASE AZA-XANTHINE COMPLEX UNDER 1500 BAR OF ARGON
Descriptor: 8-AZAXANTHINE, ACETYL GROUP, ARGON, ...
Authors:Prange, T, Colloc'h, N, Carpentier, P.
Deposit date:2021-10-14
Release date:2022-02-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Comparative study of the effects of high hydrostatic pressure per se and high argon pressure on urate oxidase ligand stabilization
Acta Cryst. D, 78, 2022
4TTT
DownloadVisualize
BU of 4ttt by Molmil
Crystal structure of an O2-tolerant [NiFe]-hydrogenase from Ralstonia eutropha in its as-isolated form - oxidized state 3
Descriptor: CHLORIDE ION, FE3-S4 CLUSTER, FE4-S3 CLUSTER, ...
Authors:Schmidt, A, Kalms, J, Scheerer, P.
Deposit date:2014-06-23
Release date:2015-01-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Tracking the route of molecular oxygen in O2-tolerant membrane-bound [NiFe] hydrogenase
Proc.Natl.Acad.Sci.Usa, 2018
6I9X
DownloadVisualize
BU of 6i9x by Molmil
urate oxidase under 35 bar of argon
Descriptor: 8-AZAXANTHINE, ARGON, SODIUM ION, ...
Authors:Prange, T, Colloc'h, N.
Deposit date:2018-11-26
Release date:2019-12-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Comparative study of the effects of high hydrostatic pressure per se and high argon pressure on urate oxidase ligand stabilization
Acta Cryst. D, 78, 2022
8AMS
DownloadVisualize
BU of 8ams by Molmil
Complex of human TRIM2 RING domain, UBCH5C, and Ubiquitin
Descriptor: 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, GLYCEROL, Polyubiquitin-C, ...
Authors:Perez-Borrajero, C, Kotova, I, Murciano, B, Hennig, J.
Deposit date:2022-08-04
Release date:2023-11-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural and biophysical studies of TRIM2 and TRIM3
To Be Published
3TMT
DownloadVisualize
BU of 3tmt by Molmil
IrisFP, distorted chromophore
Descriptor: Green to red photoconvertible GPF-like protein EosFP, SULFATE ION
Authors:Adam, V, Carpentier, P, Roy, A, Field, M, Bourgeois, D.
Deposit date:2011-08-31
Release date:2011-11-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:The nature of transient dark States in a photoactivatable fluorescent protein.
J.Am.Chem.Soc., 133, 2011
8ORO
DownloadVisualize
BU of 8oro by Molmil
CRYSTAL STRUCTURE OF THE COFACTOR-DEVOID 1-H-3-HYDROXY-4- OXOQUINALDINE 2,4-DIOXYGENASE (HOD) S101A VARIANT COMPLEXED WITH 2-METHYL-QUINOLIN-4(1H)-ONE UNDER HYPEROXYC CONDITIONS
Descriptor: 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase, 2-methyl-quinolin-4(1H)-one, D(-)-TARTARIC ACID, ...
Authors:Bui, S, Steiner, R.A.
Deposit date:2023-04-15
Release date:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Evolutionary adaptation from hydrolytic to oxygenolytic catalysis at the alpha / beta-hydrolase fold.
Chem Sci, 14, 2023
8OXN
DownloadVisualize
BU of 8oxn by Molmil
CRYSTAL STRUCTURE OF THE COFACTOR-DEVOID 1-H-3-HYDROXY-4- OXOQUINALDINE 2,4-DIOXYGENASE (HOD) S101A VARIANT COMPLEXED WITH 2-METHYL-QUINOLIN-4(1H)-ONE UNDER NORMOXYC CONDITIONS
Descriptor: 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase, 2-methyl-quinolin-4(1H)-one, GLYCEROL, ...
Authors:Bui, S, Steiner, R.A.
Deposit date:2023-05-02
Release date:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Evolutionary adaptation from hydrolytic to oxygenolytic catalysis at the alpha / beta-hydrolase fold.
Chem Sci, 14, 2023
8OXT
DownloadVisualize
BU of 8oxt by Molmil
CRYSTAL STRUCTURE OF THE COFACTOR-DEVOID 1-H-3-HYDROXY-4- OXOQUINALDINE 2,4-DIOXYGENASE (HOD) H251A VARIANT COMPLEXED WITH N-ACETYLANTHRANILATE AS RESULT OF IN CRYSTALLO TURNOVER OF ITS NATURAL SUBSTRATE 1-H-3-HYDROXY-4- OXOQUINALDINE UNDER HYPEROXIC CONDITIONS
Descriptor: 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase, 2-(ACETYLAMINO)BENZOIC ACID, GLYCEROL, ...
Authors:Bui, S, Steiner, R.A.
Deposit date:2023-05-02
Release date:2024-01-17
Method:X-RAY DIFFRACTION (2.003 Å)
Cite:Evolutionary adaptation from hydrolytic to oxygenolytic catalysis at the alpha / beta-hydrolase fold.
Chem Sci, 14, 2023
8A97
DownloadVisualize
BU of 8a97 by Molmil
ROOM TEMPERATURE CRYSTAL STRUCTURE OF THE COFACTOR-DEVOID 1-H-3-HYDROXY-4- OXOQUINALDINE 2,4-DIOXYGENASE (HOD) UNDER XENON PRESSURE (30 bar)
Descriptor: 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase, D(-)-TARTARIC ACID, XENON
Authors:Bui, S, Prange, T, Steiner, R.A.
Deposit date:2022-06-27
Release date:2023-07-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.897 Å)
Cite:Evolutionary adaptation from hydrolytic to oxygenolytic catalysis at the alpha / beta-hydrolase fold.
Chem Sci, 14, 2023
3DVW
DownloadVisualize
BU of 3dvw by Molmil
Crystal structure of reduced DsbA1 from Neisseria meningitidis
Descriptor: Thiol:disulfide interchange protein DsbA
Authors:Lafaye, C, Serre, L.
Deposit date:2008-07-21
Release date:2009-08-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Biochemical and structural study of the homologues of the thiol-disulfide oxidoreductase DsbA in Neisseria meningitidis.
J.Mol.Biol., 392, 2009
3DVX
DownloadVisualize
BU of 3dvx by Molmil
Crystal structure of reduced DsbA3 from Neisseria meningitidis
Descriptor: SULFATE ION, Thiol:disulfide interchange protein DsbA
Authors:Lafaye, C, Serre, L.
Deposit date:2008-07-21
Release date:2009-08-04
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Biochemical and structural study of the homologues of the thiol-disulfide oxidoreductase DsbA in Neisseria meningitidis.
J.Mol.Biol., 392, 2009
5MDL
DownloadVisualize
BU of 5mdl by Molmil
Crystal structure of an O2-tolerant [NiFe]-hydrogenase from Ralstonia eutropha in its O2-derivatized form by a "soak-and-freeze" derivatization method
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, FE3-S4 CLUSTER, ...
Authors:Kalms, J, Schmidt, A, Scheerer, P.
Deposit date:2016-11-11
Release date:2018-02-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Tracking the route of molecular oxygen in O2-tolerant membrane-bound [NiFe] hydrogenase.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5MDK
DownloadVisualize
BU of 5mdk by Molmil
Crystal structure of an O2-tolerant [NiFe]-hydrogenase from Ralstonia eutropha in its as-isolated form (oxidized state - state 3)
Descriptor: CHLORIDE ION, FE3-S4 CLUSTER, FE4-S3 CLUSTER, ...
Authors:Schmidt, A, Kalms, J, Scheerer, P.
Deposit date:2016-11-11
Release date:2018-02-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Tracking the route of molecular oxygen in O2-tolerant membrane-bound [NiFe] hydrogenase.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5MDJ
DownloadVisualize
BU of 5mdj by Molmil
Crystal structure of an O2-tolerant [NiFe]-hydrogenase from Ralstonia eutropha in a its as-isolated high-pressurized form
Descriptor: CHLORIDE ION, FE3-S4 CLUSTER, FE4-S3 CLUSTER, ...
Authors:Schmidt, A, Kalms, J, Scheerer, P.
Deposit date:2016-11-11
Release date:2018-02-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Tracking the route of molecular oxygen in O2-tolerant membrane-bound [NiFe] hydrogenase.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
2B3Y
DownloadVisualize
BU of 2b3y by Molmil
Structure of a monoclinic crystal form of human cytosolic aconitase (IRP1)
Descriptor: ACETATE ION, FORMIC ACID, GLYCEROL, ...
Authors:Dupuy, J, Fontecilla-Camps, J.C, Volbeda, A.
Deposit date:2005-09-22
Release date:2006-01-10
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of human iron regulatory protein 1 as cytosolic aconitase
Structure, 14, 2006
2B3X
DownloadVisualize
BU of 2b3x by Molmil
Structure of an orthorhombic crystal form of human cytosolic aconitase (IRP1)
Descriptor: 1,2-ETHANEDIOL, IRON/SULFUR CLUSTER, Iron-responsive element binding protein 1, ...
Authors:Dupuy, J, Fontecilla-Camps, J.C, Volbeda, A.
Deposit date:2005-09-22
Release date:2006-01-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Crystal structure of human iron regulatory protein 1 as cytosolic aconitase
Structure, 14, 2006
6SWV
DownloadVisualize
BU of 6swv by Molmil
Trypsin fast data collection
Descriptor: BENZAMIDINE, CALCIUM ION, Cationic trypsin, ...
Authors:von Stetten, D, Mueller-Dieckmann, C.
Deposit date:2019-09-24
Release date:2020-05-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.432 Å)
Cite:ID30A-3 (MASSIF-3) - a beamline for macromolecular crystallography at the ESRF with a small intense beam.
J.Synchrotron Radiat., 27, 2020
6I3T
DownloadVisualize
BU of 6i3t by Molmil
Crystal structure of murine neuroglobin bound to CO at 40 K.
Descriptor: ACETATE ION, CARBON MONOXIDE, FORMIC ACID, ...
Authors:Savino, C, Montemiglio, L.C, Ardiccioni, C, Exertier, C.
Deposit date:2018-11-07
Release date:2019-09-11
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Ligand pathways in neuroglobin revealed by low-temperature photodissociation and docking experiments.
Iucrj, 6, 2019
6I40
DownloadVisualize
BU of 6i40 by Molmil
Crystal structure of murine neuroglobin bound to CO at 15K under illumination using optical fiber
Descriptor: ACETATE ION, CARBON MONOXIDE, FORMIC ACID, ...
Authors:Savino, C, Montemiglio, L.C, Ardiccioni, C, Exertier, C, Vallone, B.
Deposit date:2018-11-08
Release date:2019-09-11
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Ligand pathways in neuroglobin revealed by low-temperature photodissociation and docking experiments.
Iucrj, 6, 2019
6XYT
DownloadVisualize
BU of 6xyt by Molmil
Crystal structure of the O-state of the light-driven sodium pump KR2 in the pentameric form, pH 8.0
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, EICOSANE, GLYCEROL, ...
Authors:Kovalev, K, Gushchin, I, Gordeliy, V.
Deposit date:2020-01-31
Release date:2020-02-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular mechanism of light-driven sodium pumping.
Nat Commun, 11, 2020
6YC2
DownloadVisualize
BU of 6yc2 by Molmil
Crystal structure of the light-driven sodium pump KR2 in the pentameric form at room temperature, pH 8.0
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, ALANINE, EICOSANE, ...
Authors:Kovalev, K, Gushchin, I, Gordeliy, V.
Deposit date:2020-03-18
Release date:2020-04-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular mechanism of light-driven sodium pumping.
Nat Commun, 11, 2020

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon