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4U3Q
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BU of 4u3q by Molmil
Crystal Structure of Recombinant TP0435 from Treponema pallidum
分子名称: 17 kDa lipoprotein
著者Brautigam, C.A, Deka, R.K, Norgard, M.V.
登録日2014-07-22
公開日2014-10-22
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Insights into the potential function and membrane organization of the TP0435 (Tp17) lipoprotein from Treponema pallidum derived from structural and biophysical analyses.
Protein Sci., 24, 2015
5JX2
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BU of 5jx2 by Molmil
Crystal structure of MglB-2 (Tp0684) from Treponema pallidum
分子名称: 1,2-ETHANEDIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, ...
著者Brautigam, C.A, Deka, R.K, Norgard, M.V.
登録日2016-05-12
公開日2016-08-31
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.0504 Å)
主引用文献The Tp0684 (MglB-2) Lipoprotein of Treponema pallidum: A Glucose-Binding Protein with Divergent Topology.
Plos One, 11, 2016
2F5Z
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Crystal Structure of Human Dihydrolipoamide Dehydrogenase (E3) Complexed to the E3-Binding Domain of Human E3-Binding Protein
分子名称: Dihydrolipoyl dehydrogenase, FLAVIN-ADENINE DINUCLEOTIDE, Pyruvate dehydrogenase protein X component, ...
著者Brautigam, C.A, Chuang, J.L, Wynn, R.M, Tomchick, D.R, Machius, M, Chuang, D.T.
登録日2005-11-28
公開日2006-01-17
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Structural Insight into Interactions between Dihydrolipoamide Dehydrogenase (E3) and E3 Binding Protein of Human Pyruvate Dehydrogenase Complex.
Structure, 14, 2006
8FIR
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BU of 8fir by Molmil
Crystal structure of TpPta, a phosphotransacetylase from Treponema pallidum
分子名称: 1,2-ETHANEDIOL, CITRIC ACID, Phosphate acetyltransferase
著者Brautigam, C.A, Norgard, M.V, Deka, R.K.
登録日2022-12-16
公開日2023-05-31
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Biophysical and biochemical studies support TP0094 as a phosphotransacetylase in an acetogenic energy-conservation pathway in Treponema pallidum.
Plos One, 18, 2023
1QSL
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BU of 1qsl by Molmil
KLENOW FRAGMENT COMPLEXED WITH SINGLE-STRANDED SUBSTRATE AND EUROPIUM (III) ION
分子名称: 5'-D(*GP*CP*TP*TP*AP*CP*GP*C)-3', DNA POLYMERASE I, EUROPIUM ION
著者Brautigam, C.A, Aschheim, K, Steitz, T.A.
登録日1999-06-22
公開日1999-06-30
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural elucidation of the binding and inhibitory properties of lanthanide (III) ions at the 3'-5' exonucleolytic active site of the Klenow fragment
Chem.Biol., 6, 1999
1U3D
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BU of 1u3d by Molmil
Crystal Structure of the PHR domain of Cryptochrome 1 from Arabidopsis thaliana with AMPPNP bound
分子名称: CHLORIDE ION, Cryptochrome 1 apoprotein, ETHYL DIMETHYL AMMONIO PROPANE SULFONATE, ...
著者Brautigam, C.A, Smith, B.S, Ma, Z, Palnitkar, M, Tomchick, D.R, Machius, M, Deisenhofer, J.
登録日2004-07-21
公開日2004-08-24
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structure of the photolyase-like domain of cryptochrome 1 from Arabidopsis thaliana.
Proc.Natl.Acad.Sci.USA, 101, 2004
1U3C
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Crystal Structure of the PHR domain of Cryptochrome 1 from Arabidopsis thaliana
分子名称: CHLORIDE ION, Cryptochrome 1 apoprotein, ETHYL DIMETHYL AMMONIO PROPANE SULFONATE, ...
著者Brautigam, C.A, Smith, B.S, Ma, Z, Palnitkar, M, Tomchick, D.R, Machius, M, Deisenhofer, J.
登録日2004-07-21
公開日2004-08-24
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of the photolyase-like domain of cryptochrome 1 from Arabidopsis thaliana.
Proc.Natl.Acad.Sci.USA, 101, 2004
4DI3
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Crystal structure of a 2:1 complex of Treponema pallidum TatP(T) (Tp0957) bound to TatT (Tp0956)
分子名称: TatP(T) (Tp0957), TatT (Tp0956)
著者Brautigam, C.A, Deka, R.K, Norgard, M.V.
登録日2012-01-30
公開日2012-05-23
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Structural and Thermodynamic Characterization of the Interaction between Two Periplasmic Treponema pallidum Lipoproteins that are Components of a TPR-Protein-Associated TRAP Transporter (TPAT).
J.Mol.Biol., 420, 2012
4DI4
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Crystal structure of a 3:1 complex of Treponema pallidum TatP(T) (Tp0957) bound to TatT (Tp0956)
分子名称: TETRAETHYLENE GLYCOL, TRIETHYLENE GLYCOL, TatP(T) (Tp0957), ...
著者Brautigam, C.A, Deka, R.K, Norgard, M.V.
登録日2012-01-30
公開日2012-05-23
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.714 Å)
主引用文献Structural and Thermodynamic Characterization of the Interaction between Two Periplasmic Treponema pallidum Lipoproteins that are Components of a TPR-Protein-Associated TRAP Transporter (TPAT).
J.Mol.Biol., 420, 2012
2KFZ
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KLENOW FRAGMENT WITH BRIDGING-SULFUR SUBSTRATE AND ZINC ONLY
分子名称: 5'-D(*GP*CP*TP*TP*AP*(US1)P*G)-3', KLENOW FRAGMENT OF DNA POLYMERASE I, MAGNESIUM ION, ...
著者Brautigam, C.A, Sun, S, Piccirilli, J.A, Steitz, T.A.
登録日1998-07-02
公開日1998-11-11
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Structures of normal single-stranded DNA and deoxyribo-3'-S-phosphorothiolates bound to the 3'-5' exonucleolytic active site of DNA polymerase I from Escherichia coli.
Biochemistry, 38, 1999
2KFN
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KLENOW FRAGMENT WITH BRIDGING-SULFUR SUBSTRATE AND MANGANESE
分子名称: 5'-D(*GP*CP*TP*TP*AP*(US1)P*G)-3', KLENOW FRAGMENT OF DNA POLYMERASE I, MAGNESIUM ION, ...
著者Brautigam, C.A, Sun, S, Piccirilli, J.A, Steitz, T.A.
登録日1998-07-01
公開日1998-11-11
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Structures of normal single-stranded DNA and deoxyribo-3'-S-phosphorothiolates bound to the 3'-5' exonucleolytic active site of DNA polymerase I from Escherichia coli.
Biochemistry, 38, 1999
2KZM
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KLENOW FRAGMENT WITH NORMAL SUBSTRATE AND ZINC AND MANGANESE
分子名称: DNA (5'-D(*GP*CP*TP*TP*A*CP*GP*C)-3'), MANGANESE (II) ION, PROTEIN (DNA POLYMERASE I), ...
著者Brautigam, C.A, Sun, S, Piccirilli, J.A, Steitz, T.A.
登録日1998-07-03
公開日1999-02-16
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structures of normal single-stranded DNA and deoxyribo-3'-S-phosphorothiolates bound to the 3'-5' exonucleolytic active site of DNA polymerase I from Escherichia coli.
Biochemistry, 38, 1999
2KZZ
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KLENOW FRAGMENT WITH NORMAL SUBSTRATE AND ZINC ONLY
分子名称: DNA (5'-D(*GP*CP*TP*T*AP*CP*G)-3'), PROTEIN (DNA POLYMERASE I), ZINC ION
著者Brautigam, C.A, Sun, S, Piccirilli, J.A, Steitz, T.A.
登録日1998-07-07
公開日1999-12-14
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structures of normal single-stranded DNA and deoxyribo-3'-S-phosphorothiolates bound to the 3'-5' exonucleolytic active site of DNA polymerase I from Escherichia coli.
Biochemistry, 38, 1999
1KFS
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BU of 1kfs by Molmil
DNA POLYMERASE I KLENOW FRAGMENT (E.C.2.7.7.7) MUTANT/DNA COMPLEX
分子名称: DNA (5'-D(*GP*CP*TP*TP*AP*CP*G)-3'), MAGNESIUM ION, PROTEIN (DNA POLYMERASE I KLENOW FRAGMENT (E.C.2.7.7.7)), ...
著者Brautigam, C.A, Steitz, T.A.
登録日1997-08-18
公開日1998-02-25
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural principles for the inhibition of the 3'-5' exonuclease activity of Escherichia coli DNA polymerase I by phosphorothioates.
J.Mol.Biol., 277, 1998
1KSP
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BU of 1ksp by Molmil
DNA polymerase I Klenow fragment (E.C.2.7.7.7) mutant/DNA complex
分子名称: DNA (5'-D(P*TP*TP*PST)-3'), PROTEIN (DNA POLYMERASE I-KLENOW FRAGMENT (E.C.2.7.7.7)), ZINC ION
著者Brautigam, C.A, Steitz, T.A.
登録日1997-08-19
公開日1998-02-25
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural principles for the inhibition of the 3'-5' exonuclease activity of Escherichia coli DNA polymerase I by phosphorothioates.
J.Mol.Biol., 277, 1998
1KRP
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BU of 1krp by Molmil
DNA polymerase I Klenow fragment (E.C.2.7.7.7) mutant/DNA complex
分子名称: DNA (5'-D(P*TP*TP*PST)-3'), PROTEIN (DNA POLYMERASE I KLENOW FRAGMENT (E.C.2.7.7.7)), ZINC ION
著者Brautigam, C.A, Steitz, T.A.
登録日1997-08-19
公開日1998-02-25
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural principles for the inhibition of the 3'-5' exonuclease activity of Escherichia coli DNA polymerase I by phosphorothioates.
J.Mol.Biol., 277, 1998
1PK8
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Crystal Structure of Rat Synapsin I C Domain Complexed to Ca.ATP
分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, ...
著者Brautigam, C.A, Chelliah, Y, Deisenhofer, J.
登録日2003-06-05
公開日2004-03-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Tetramerization and ATP binding by a protein comprising the A, B, and C domains of rat synapsin I.
J.Biol.Chem., 279, 2004
1PX2
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BU of 1px2 by Molmil
Crystal Structure of Rat Synapsin I C Domain Complexed to Ca.ATP (Form 1)
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, Synapsin I
著者Brautigam, C.A, Chelliah, Y, Deisenhofer, J.
登録日2003-07-02
公開日2004-03-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Tetramerization and ATP binding by a protein comprising the A, B, and C domains of rat synapsin I.
J.Biol.Chem., 279, 2004
3PJL
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The crystal structure of Tp34 bound to Co (II) ion at pH 7.5
分子名称: 1,2-ETHANEDIOL, 34 kDa membrane antigen, COBALT (II) ION, ...
著者Brautigam, C.A, Deka, R.K, Tomchick, D.R, Machius, M, Norgard, M.V.
登録日2010-11-10
公開日2011-11-02
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Characterization of the Tp34 lipoprotein from Treponema pallidum suggests a role in transition metal homeostasis
To be Published
3PJN
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The crystal structure of Tp34 bound to Zn(II) ion at pH 7.5
分子名称: 1,2-ETHANEDIOL, 34 kDa membrane antigen, SULFATE ION, ...
著者Brautigam, C.A, Deka, R.K, Tomchick, D.R, Machius, M, Norgard, M.V.
登録日2010-11-10
公開日2011-11-02
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Characterization of the Tp34 lipoprotein from Treponema pallidum suggests a role in transition metal homeostasis
To be Published
3RNM
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BU of 3rnm by Molmil
The crystal structure of the subunit binding of human dihydrolipoamide transacylase (E2b) bound to human dihydrolipoamide dehydrogenase (E3)
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, BETA-MERCAPTOETHANOL, Dihydrolipoyl dehydrogenase, ...
著者Brautigam, C.A, Wynn, R.M, Chuang, J.C, Young, B.B, Chuang, D.T.
登録日2011-04-22
公開日2011-05-04
最終更新日2011-07-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural and Thermodynamic Basis for Weak Interactions between Dihydrolipoamide Dehydrogenase and Subunit-binding Domain of the Branched-chain {alpha}-Ketoacid Dehydrogenase Complex.
J.Biol.Chem., 286, 2011
1ZMD
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BU of 1zmd by Molmil
Crystal Structure of Human dihydrolipoamide dehydrogenase complexed to NADH
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Dihydrolipoyl dehydrogenase, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Brautigam, C.A, Chuang, J.L, Tomchick, D.R, Machius, M, Chuang, D.T.
登録日2005-05-10
公開日2005-06-28
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Crystal Structure of Human Dihydrolipoamide Dehydrogenase: NAD+/NADH Binding and the Structural Basis of Disease-causing Mutations
J.Mol.Biol., 350, 2005
1ZMC
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Crystal Structure of Human dihydrolipoamide dehydrogenase complexed to NAD+
分子名称: Dihydrolipoyl dehydrogenase, mitochondrial, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Brautigam, C.A, Chuang, J.L, Tomchick, D.R, Machius, M, Chuang, D.T.
登録日2005-05-10
公開日2005-06-28
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.53 Å)
主引用文献Crystal Structure of Human Dihydrolipoamide Dehydrogenase: NAD(+)/NADH Binding and the Structural Basis of Disease-causing Mutations
J.Mol.Biol., 350, 2005
6BGD
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BU of 6bgd by Molmil
The crystal structure of the W145A variant of TpMglB-2 (Tp0684) with bound ligand
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Glucose/galactose-binding lipoprotein
著者Brautigam, C.A, Norgard, M.V, Deka, R.K.
登録日2017-10-27
公開日2018-01-31
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Crystal structures of MglB-2 (TP0684), a topologically variant d-glucose-binding protein from Treponema pallidum, reveal a ligand-induced conformational change.
Protein Sci., 27, 2018
6BGC
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BU of 6bgc by Molmil
The crystal structure of the W145A variant of TpMglB-2 (Tp0684) with bound glucose
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Glucose/galactose-binding lipoprotein, ...
著者Brautigam, C.A, Norgard, M.V, Deka, R.K.
登録日2017-10-27
公開日2018-01-31
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.082 Å)
主引用文献Crystal structures of MglB-2 (TP0684), a topologically variant d-glucose-binding protein from Treponema pallidum, reveal a ligand-induced conformational change.
Protein Sci., 27, 2018

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