Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3EW1
DownloadVisualize
BU of 3ew1 by Molmil
Crystal structure of rhizavidin
Descriptor: rhizavidin
Authors:Livnah, O, Meir, A.
Deposit date:2008-10-14
Release date:2008-12-23
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of rhizavidin: insights into the enigmatic high-affinity interaction of an innate biotin-binding protein dimer.
J.Mol.Biol., 386, 2009
6HDT
DownloadVisualize
BU of 6hdt by Molmil
crystal structure of short afifavidin - biotin complex
Descriptor: BIOTIN, Short afifavidin
Authors:Livnah, O, Avraham, O.
Deposit date:2018-08-19
Release date:2018-11-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Crystal structure of afifavidin reveals common features of molecular assemblage in the bacterial dimeric avidins.
FEBS J., 285, 2018
6HDS
DownloadVisualize
BU of 6hds by Molmil
Crystal Structure of apo short afifavidin
Descriptor: short afifavidin
Authors:Livnah, O, Avraham, O.
Deposit date:2018-08-19
Release date:2018-11-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Crystal structure of afifavidin reveals common features of molecular assemblage in the bacterial dimeric avidins.
FEBS J., 285, 2018
6HDV
DownloadVisualize
BU of 6hdv by Molmil
The crystal structure of intact afifavidin apo form
Descriptor: Afifavidin
Authors:Livnah, O, Avraham, O.
Deposit date:2018-08-20
Release date:2018-11-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Crystal structure of afifavidin reveals common features of molecular assemblage in the bacterial dimeric avidins.
FEBS J., 285, 2018
6IVU
DownloadVisualize
BU of 6ivu by Molmil
Solution structure of the Sigma-anti-sigma factor complex RsgI1N-SigI1C from Clostridium thermocellum
Descriptor: Anti-sigma-I factor RsgI1, RNA polymerase sigma factor SigI1
Authors:Wei, Z, Feng, Y.
Deposit date:2018-12-04
Release date:2019-05-15
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Alternative sigma I/anti-sigma I factors represent a unique form of bacterial sigma /anti-sigma complex.
Nucleic Acids Res., 47, 2019
6IVS
DownloadVisualize
BU of 6ivs by Molmil
Solution structure of the N-terminal domain of the anti-sigma factor RsgI1 from Clostridium thermocellum
Descriptor: Anti-sigma-I factor RsgI1
Authors:Wei, Z, Feng, Y.
Deposit date:2018-12-04
Release date:2019-05-15
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Alternative sigma I/anti-sigma I factors represent a unique form of bacterial sigma /anti-sigma complex.
Nucleic Acids Res., 47, 2019
8HDJ
DownloadVisualize
BU of 8hdj by Molmil
Periplasmic domain of RsgI2 of Clostridium thermocellum
Descriptor: Anti-sigma-I factor RsgI2, Periplasmic domain of RsgI2
Authors:Chen, C, Dong, S, Feng, Y.G.
Deposit date:2022-11-04
Release date:2023-05-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Essential autoproteolysis of bacterial anti-sigma factor RsgI for transmembrane signal transduction.
Sci Adv, 9, 2023
8HEP
DownloadVisualize
BU of 8hep by Molmil
Solution structure of the periplasmic domain of the anti-sigma factor RsgI1 from Clostridium thermocellum
Descriptor: Anti-sigma factor
Authors:Chen, C, Feng, Y.
Deposit date:2022-11-08
Release date:2023-05-24
Last modified:2023-08-02
Method:SOLUTION NMR
Cite:Essential autoproteolysis of bacterial anti-sigma factor RsgI for transmembrane signal transduction.
Sci Adv, 9, 2023
8HEQ
DownloadVisualize
BU of 8heq by Molmil
Solution structure of the periplasmic domain of the anti-sigma factor RsgI2 from Clostridium thermocellum
Descriptor: Anti-sigma-I factor RsgI2
Authors:Chen, C, Feng, Y.
Deposit date:2022-11-08
Release date:2023-05-24
Last modified:2023-08-02
Method:SOLUTION NMR
Cite:Essential autoproteolysis of bacterial anti-sigma factor RsgI for transmembrane signal transduction.
Sci Adv, 9, 2023
8HER
DownloadVisualize
BU of 8her by Molmil
Solution structure of the periplasmic domain of RsgI6 from Clostridium thermocellum
Descriptor: Anti-sigma factor
Authors:Chen, C, Feng, Y.
Deposit date:2022-11-08
Release date:2023-05-24
Last modified:2023-08-02
Method:SOLUTION NMR
Cite:Essential autoproteolysis of bacterial anti-sigma factor RsgI for transmembrane signal transduction.
Sci Adv, 9, 2023
6KG9
DownloadVisualize
BU of 6kg9 by Molmil
Solution structure of CaDoc0917 from Clostridium acetobutylicum
Descriptor: And cellulose-binding endoglucanase family 9 CelL ortholog dockerin domain, CALCIUM ION
Authors:Feng, Y, Yao, X.
Deposit date:2019-07-11
Release date:2020-07-08
Last modified:2020-11-04
Method:SOLUTION NMR
Cite:Discovery and mechanism of a pH-dependent dual-binding-site switch in the interaction of a pair of protein modules.
Sci Adv, 6, 2020
6KGF
DownloadVisualize
BU of 6kgf by Molmil
Crystal structure of CaDoc0917(R16D)-CaCohA2 complex at pH 8.2
Descriptor: And cellulose-binding endoglucanase family 9 CelL ortholog dockerin domain, CALCIUM ION, Probably cellulosomal scaffolding protein, ...
Authors:Feng, Y, Yao, X.
Deposit date:2019-07-11
Release date:2020-07-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Discovery and mechanism of a pH-dependent dual-binding-site switch in the interaction of a pair of protein modules.
Sci Adv, 6, 2020
6KGC
DownloadVisualize
BU of 6kgc by Molmil
Crystal structure of CaDoc0917(R49D)-CaCohA2 complex at pH 5.4
Descriptor: And cellulose-binding endoglucanase family 9 CelL ortholog dockerin domain, CALCIUM ION, Probably cellulosomal scaffolding protein, ...
Authors:Feng, Y, Yao, X.
Deposit date:2019-07-11
Release date:2020-07-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Discovery and mechanism of a pH-dependent dual-binding-site switch in the interaction of a pair of protein modules.
Sci Adv, 6, 2020
6KGD
DownloadVisualize
BU of 6kgd by Molmil
Crystal structure of CaDoc0917(R49D)-CaCohA2 complex at pH 8.0
Descriptor: And cellulose-binding endoglucanase family 9 CelL ortholog dockerin domain, CALCIUM ION, Probably cellulosomal scaffolding protein, ...
Authors:Feng, Y, Yao, X.
Deposit date:2019-07-11
Release date:2020-07-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Discovery and mechanism of a pH-dependent dual-binding-site switch in the interaction of a pair of protein modules.
Sci Adv, 6, 2020
6KGE
DownloadVisualize
BU of 6kge by Molmil
Crystal structure of CaDoc0917(R16D)-CaCohA2 complex at pH 5.5
Descriptor: And cellulose-binding endoglucanase family 9 CelL ortholog dockerin domain, CALCIUM ION, Probably cellulosomal scaffolding protein, ...
Authors:Feng, Y, Yao, X.
Deposit date:2019-07-11
Release date:2020-07-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery and mechanism of a pH-dependent dual-binding-site switch in the interaction of a pair of protein modules.
Sci Adv, 6, 2020
6KG8
DownloadVisualize
BU of 6kg8 by Molmil
Solution structure of CaCohA2 from Clostridium acetobutylicum
Descriptor: Probably cellulosomal scaffolding protein, secreted cellulose-binding and cohesin domain
Authors:Feng, Y, Yao, X.
Deposit date:2019-07-11
Release date:2020-07-08
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Discovery and mechanism of a pH-dependent dual-binding-site switch in the interaction of a pair of protein modules.
Sci Adv, 6, 2020
2FHL
DownloadVisualize
BU of 2fhl by Molmil
avidin related protein (AVR4)-BNA complex
Descriptor: 5-(2-OXO-HEXAHYDRO-THIENO[3,4-D]IMIDAZOL-6-YL)-PENTANOIC ACID (4-NITRO-PHENYL)-AMIDE, Avidin-related protein 4/5, FORMIC ACID
Authors:Livnah, O, Prizant, M.
Deposit date:2005-12-26
Release date:2006-03-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Factors dictating the pseudocatalytic efficiency of avidins
J.Mol.Biol., 358, 2006
2FHN
DownloadVisualize
BU of 2fhn by Molmil
Avidin related protein AVR4 (C122S, K109I mutant) in complex with BNA
Descriptor: 5-(2-OXO-HEXAHYDRO-THIENO[3,4-D]IMIDAZOL-6-YL)-PENTANOIC ACID (4-NITRO-PHENYL)-AMIDE, Avidin-related protein 4/5, FORMIC ACID
Authors:Livnah, O, Prizant, M.
Deposit date:2005-12-26
Release date:2006-03-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Factors dictating the pseudocatalytic efficiency of avidins
J.Mol.Biol., 358, 2006
7RAW
DownloadVisualize
BU of 7raw by Molmil
Domain 1 of Starch adherence system protein 20 (Sas20) from Ruminococcus bromii
Descriptor: DI(HYDROXYETHYL)ETHER, Dockerin domain-containing protein, TRIETHYLENE GLYCOL
Authors:Cerqueira, F.M, Koropatkin, N.M.
Deposit date:2021-07-04
Release date:2022-04-13
Last modified:2022-05-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Sas20 is a highly flexible starch-binding protein in the Ruminococcus bromii cell-surface amylosome.
J.Biol.Chem., 298, 2022
7RPY
DownloadVisualize
BU of 7rpy by Molmil
X25-2 domain of Sca5 from Ruminococcus bromii
Descriptor: ACETATE ION, Cohesin-containing protein, GLYCEROL, ...
Authors:Cerqueira, F, Koropatkin, N.
Deposit date:2021-08-04
Release date:2022-04-13
Last modified:2022-05-25
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Sas20 is a highly flexible starch-binding protein in the Ruminococcus bromii cell-surface amylosome.
J.Biol.Chem., 298, 2022
7RFT
DownloadVisualize
BU of 7rft by Molmil
Domain 1 of Starch adherence system protein 20 (Sas20) from Ruminococcus bromii with maltotriose
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Dockerin domain-containing protein, ...
Authors:Koropatkin, N, Cerqueira, F.
Deposit date:2021-07-14
Release date:2022-04-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Sas20 is a highly flexible starch-binding protein in the Ruminococcus bromii cell-surface amylosome.
J.Biol.Chem., 298, 2022
1LCV
DownloadVisualize
BU of 1lcv by Molmil
streptavidin-norbiotin complex
Descriptor: NORBIOTIN, streptavidin
Authors:Livnah, O, Pazy, Y.
Deposit date:2002-04-07
Release date:2002-11-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Ligand exchange between proteins: exchange of biotin and biotin derivatives between avidin and streptavidin
J.Biol.Chem., 277, 2002
7X0R
DownloadVisualize
BU of 7x0r by Molmil
Crystal structure of substrate binding protein Lbp complexed wtih guanosine from Clostridium thermocellum
Descriptor: GUANOSINE, Lbp, ZINC ION
Authors:Dong, S, Yao, X, Feng, Y.
Deposit date:2022-02-22
Release date:2022-09-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Deciphering Cellodextrin and Glucose Uptake in Clostridium thermocellum.
Mbio, 13, 2022
7X0I
DownloadVisualize
BU of 7x0i by Molmil
Crystal structure of sugar binding protein CbpB from Clostridium thermocellum
Descriptor: CbpB
Authors:Dong, S, Yao, X, Feng, Y.
Deposit date:2022-02-22
Release date:2022-09-14
Last modified:2022-11-09
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Deciphering Cellodextrin and Glucose Uptake in Clostridium thermocellum.
Mbio, 13, 2022
7X0N
DownloadVisualize
BU of 7x0n by Molmil
Crystal structure of sugar binding protein CbpB complexed wtih laminaribiose from Clostridium thermocellum
Descriptor: CbpB, beta-D-glucopyranose-(1-3)-beta-D-glucopyranose
Authors:Dong, S, Yao, X, Feng, Y.
Deposit date:2022-02-22
Release date:2022-09-14
Last modified:2022-11-09
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Deciphering Cellodextrin and Glucose Uptake in Clostridium thermocellum.
Mbio, 13, 2022

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon