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1N7U
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THE RECEPTOR-BINDING PROTEIN P2 OF BACTERIOPHAGE PRD1: CRYSTAL FORM I
Descriptor: ACETATE ION, Adsorption protein P2, CALCIUM ION
Authors:Xu, L, Benson, S.D, Butcher, S.J, Bamford, D.H, Burnett, R.M.
Deposit date:2002-11-18
Release date:2003-04-08
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The Receptor Binding Protein P2 of PRD1, a Virus Targeting Antibiotic-Resistant Bacteria, Has a Novel Fold Suggesting Multiple Functions.
Structure, 11, 2003
1N7V
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THE RECEPTOR-BINDING PROTEIN P2 OF BACTERIOPHAGE PRD1: CRYSTAL FORM III
Descriptor: ACETATE ION, Adsorption protein P2, CALCIUM ION
Authors:Xu, L, Benson, S.D, Butcher, S.J, Bamford, D.H, Burnett, R.M.
Deposit date:2002-11-18
Release date:2003-04-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Receptor Binding Protein P2 of PRD1, a Virus Targeting Antibiotic-Resistant Bacteria, Has a Novel Fold Suggesting Multiple Functions.
Structure, 11, 2003
2VVD
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BU of 2vvd by Molmil
Crystal structure of the receptor binding domain of the spike protein P1 from bacteriophage PM2
Descriptor: CALCIUM ION, SPIKE PROTEIN P1
Authors:Abrescia, N.G.A, Grimes, J.M, Kivela, H.K, Assenberg, R, Sutton, G.C, Butcher, S.J, Bamford, J.K.H, Bamford, D.H, Stuart, D.I.
Deposit date:2008-06-06
Release date:2008-09-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Insights Into Virus Evolution and Membrane Biogenesis from the Structure of the Marine Lipid-Containing Bacteriophage Pm2.
Mol.Cell, 31, 2008
2VVE
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Crystal structure of the stem and receptor binding domain of the spike protein P1 from bacteriophage PM2
Descriptor: CALCIUM ION, CHLORIDE ION, SPIKE PROTEIN P1
Authors:Abrescia, N.G.A, Grimes, J.M, Kivela, H.K, Assenberg, R, Sutton, G.C, Butcher, S.J, Bamford, J.K.H, Bamford, D.H, Stuart, D.I.
Deposit date:2008-06-06
Release date:2008-09-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Insights Into Virus Evolution and Membrane Biogenesis from the Structure of the Marine Lipid-Containing Bacteriophage Pm2.
Mol.Cell, 31, 2008
2VVF
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Crystal structure of the major capsid protein P2 from Bacteriophage PM2
Descriptor: CALCIUM ION, MAJOR CAPSID PROTEIN P2
Authors:Abrescia, N.G.A, Grimes, J.M, Kivela, H.K, Assenberg, R, Sutton, G.C, Butcher, S.J, Bamford, J.K.H, Bamford, D.H, Stuart, D.I.
Deposit date:2008-06-06
Release date:2008-09-16
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Insights Into Virus Evolution and Membrane Biogenesis from the Structure of the Marine Lipid-Containing Bacteriophage Pm2.
Mol.Cell, 31, 2008
3ZED
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BU of 3zed by Molmil
X-ray structure of the birnavirus VP1-VP3 complex
Descriptor: CAPSID PROTEIN VP3, GLYCEROL, POTASSIUM ION, ...
Authors:Bahar, M.W, Sarin, L.P, Graham, S.C, Pang, J, Bamford, D.H, Stuart, D.I, Grimes, J.M.
Deposit date:2012-12-04
Release date:2013-01-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of a Vp1-Vp3 Complex Suggests How Birnaviruses Package the Vp1 Polymerase.
J.Virol., 87, 2013
2J7O
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BU of 2j7o by Molmil
STRUCTURE OF THE RNAI POLYMERASE FROM NEUROSPORA CRASSA
Descriptor: MAGNESIUM ION, RNA DEPENDENT RNA POLYMERASE
Authors:Salgado, P.S, Koivunen, M.R.L, Makeyev, E.V, Bamford, D.H, Stuart, D.I, Grimes, J.M.
Deposit date:2006-10-13
Release date:2006-12-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:The Structure of an Rnai Polymerase Links RNA Silencing and Transcription.
Plos Biol., 4, 2006
2W0C
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BU of 2w0c by Molmil
X-ray structure of the entire lipid-containing bacteriophage PM2
Descriptor: CALCIUM ION, MAJOR CAPSID PROTEIN P2, PROTEIN 2, ...
Authors:Abrescia, N.G.A, Grimes, J.M, Kivela, H.M, Assenberg, R, Sutton, G.C, Butcher, S.J, Bamford, J.K.H, Bamford, D.H, Stuart, D.I.
Deposit date:2008-08-13
Release date:2008-09-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (7 Å)
Cite:Insights Into Virus Evolution and Membrane Biogenesis from the Structure of the Marine Lipid-Containing Bacteriophage Pm2
Mol.Cell, 31, 2008
2J7N
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Structure of the RNAi polymerase from Neurospora crassa
Descriptor: GLYCEROL, MAGNESIUM ION, RNA-DEPENDENT RNA POLYMERASE
Authors:Salgado, P.S, Koivunen, M.R.L, Makeyev, E.V, Bamford, D.H, Stuart, D.I, Grimes, J.M.
Deposit date:2006-10-13
Release date:2006-12-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Structure of an Rnai Polymerase Links RNA Silencing and Transcription.
Plos Biol., 4, 2006
1CJD
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BU of 1cjd by Molmil
THE BACTERIOPHAGE PRD1 COAT PROTEIN, P3, IS STRUCTURALLY SIMILAR TO HUMAN ADENOVIRUS HEXON
Descriptor: PROTEIN (MAJOR CAPSID PROTEIN (P3))
Authors:Benson, S.D, Bamford, J.K.H, Bamford, D.H, Burnett, R.M.
Deposit date:1999-04-12
Release date:1999-09-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Viral evolution revealed by bacteriophage PRD1 and human adenovirus coat protein structures.
Cell(Cambridge,Mass.), 98, 1999
2VHC
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P4 PROTEIN FROM BACTERIOPHAGE PHI12 N234G mutant in complex with AMPCPP and MN
Descriptor: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, MANGANESE (II) ION, NTPASE P4
Authors:Kainov, D.E, Mancini, E.J, Telenius, J, Lisal, J, Grimes, J.M, Bamford, D.H, Stuart, D.I, Tuma, R.
Deposit date:2007-11-20
Release date:2007-12-04
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural Basis of Mechanochemical Coupling in a Hexameric Molecular Motor.
J.Biol.Chem., 283, 2008
2VHJ
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BU of 2vhj by Molmil
P4 PROTEIN FROM BACTERIOPHAGE PHI12 S252A mutant in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, NTPASE P4
Authors:Kainov, D.E, Mancini, E.J, Telenius, J, Lisal, J, Grimes, J.M, Bamford, D.H, Stuart, D.I, Tuma, R.
Deposit date:2007-11-21
Release date:2007-12-04
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis of Mechanochemical Coupling in a Hexameric Molecular Motor.
J.Biol.Chem., 283, 2008
2VHQ
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BU of 2vhq by Molmil
P4 PROTEIN FROM BACTERIOPHAGE PHI12 S252A mutant in complex with ATP AND MG
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, NTPASE P4
Authors:Kainov, D.E, Mancini, E.J, Telenius, J, Lisal, J, Grimes, J.M, Bamford, D.H, Stuart, D.I, Tuma, R.
Deposit date:2007-11-22
Release date:2007-12-04
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural Basis of Mechanochemical Coupling in a Hexameric Molecular Motor.
J.Biol.Chem., 283, 2008
2VHU
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BU of 2vhu by Molmil
P4 PROTEIN FROM BACTERIOPHAGE PHI12 K241C mutant in complex with ADP and MgCl
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, NTPASE P4
Authors:Kainov, D.E, Mancini, E.J, Telenius, J, Lisal, J, Grimes, J.M, Bamford, D.H, Stuart, D.I, Tuma, R.
Deposit date:2007-11-25
Release date:2007-12-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structural Basis of Mechanochemical Coupling in a Hexameric Molecular Motor.
J.Biol.Chem., 283, 2008
2VHT
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BU of 2vht by Molmil
P4 PROTEIN FROM BACTERIOPHAGE PHI12 R279A mutant in complex with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, NTPASE P4
Authors:Kainov, D.E, Mancini, E.J, Telenius, J, Lisal, J, Grimes, J.M, Bamford, D.H, Stuart, D.I, Tuma, R.
Deposit date:2007-11-25
Release date:2007-12-04
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Basis of Mechanochemical Coupling in a Hexameric Molecular Motor.
J.Biol.Chem., 283, 2008
1W8X
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BU of 1w8x by Molmil
Structural analysis of PRD1
Descriptor: MAJOR CAPSID PROTEIN (PROTEIN P3), PROTEIN P16, PROTEIN P30, ...
Authors:Abrescia, N.G.A, Cockburn, J.J.B, Grimes, J.M, Sutton, G.C, Diprose, J.M, Butcher, S.J, Fuller, S.D, San Martin, C, Burnett, R.M, Stuart, D.I, Bamford, D.H, Bamford, J.K.H.
Deposit date:2004-10-01
Release date:2004-11-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (4.2 Å)
Cite:Insights Into Assembly from Structural Analysis of Bacteriophage Prd1.
Nature, 432, 2004
2JLF
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BU of 2jlf by Molmil
STRUCTURAL EXPLANATION FOR THE ROLE OF MN IN THE ACTIVITY OF PHI6 RNA- DEPENDENT RNA POLYMERASE
Descriptor: MANGANESE (II) ION, RNA-DIRECTED RNA POLYMERASE
Authors:Poranen, M.M, Salgado, P.S, Koivunen, M.R.L, Wright, S, Bamford, D.H, Stuart, D.I, Grimes, J.M.
Deposit date:2008-09-08
Release date:2008-11-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural Explanation for the Role of Mn2+ in the Activity of {Phi}6 RNA-Dependent RNA Polymerase.
Nucleic Acids Res., 36, 2008
2JLG
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BU of 2jlg by Molmil
STRUCTURAL EXPLANATION FOR THE ROLE OF MN IN THE ACTIVITY OF PHI6 RNA-DEPENDENT RNA POLYMERASE
Descriptor: 5'-D(*DT DT DT DC DCP)-3', GUANOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, ...
Authors:Poranen, M.M, Salgado, P.S, Koivunen, M.R.L, Wright, S, Bamford, D.H, Stuart, D.I, Grimes, J.M.
Deposit date:2008-09-09
Release date:2008-11-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural Explanation for the Role of Mn2+ in the Activity of {Phi}6 RNA-Dependent RNA Polymerase.
Nucleic Acids Res., 36, 2008
2JL9
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Structural explanation for the role of Mn in the activity of phi6 RNA- dependent RNA polymerase
Descriptor: RNA-DIRECTED RNA POLYMERASE
Authors:Poranen, M.M, Salgado, P.S, Koivunen, M.R.L, Wright, S, Bamford, D.H, Stuart, D.I, Grimes, J.M.
Deposit date:2008-09-05
Release date:2008-11-04
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural Explanation for the Role of Mn2+ in the Activity of {Phi}6 RNA-Dependent RNA Polymerase.
Nucleic Acids Res., 36, 2008
1YQ5
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PRD1 vertex protein P5
Descriptor: Minor capsid protein
Authors:Merckel, M.C, Huiskonen, J.T, Goldman, A, Bamford, D.H, Tuma, R.
Deposit date:2005-02-01
Release date:2005-04-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The structure of the bacteriophage PRD1 spike sheds light on the evolution of viral capsid architecture.
Mol.Cell, 18, 2005
1YQ8
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PRD1 vertex protein P5
Descriptor: Minor capsid protein
Authors:Merckel, M.C, Huiskonen, J.T, Goldman, A, Bamford, D.H, Tuma, R.
Deposit date:2005-02-01
Release date:2005-04-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The structure of the bacteriophage PRD1 spike sheds light on the evolution of viral capsid architecture.
Mol.Cell, 18, 2005
1YQ6
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PRD1 vertex protein P5
Descriptor: Minor capsid protein
Authors:Merckel, M.C, Huiskonen, J.T, Goldman, A, Bamford, D.H, Tuma, R.
Deposit date:2005-02-01
Release date:2005-04-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The structure of the bacteriophage PRD1 spike sheds light on the evolution of viral capsid architecture.
Mol.Cell, 18, 2005
2YIB
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Structure of the RNA polymerase VP1 from Infectious Pancreatic Necrosis Virus
Descriptor: RNA-DIRECTED RNA POLYMERASE
Authors:Graham, S.C, Sarin, L.P, Bahar, M.W, Myers, R.A, Stuart, D.I, Bamford, D.H, Grimes, J.M.
Deposit date:2011-05-11
Release date:2011-07-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:The N-Terminus of the RNA Polymerase from Infectious Pancreatic Necrosis Virus is the Determinant of Genome Attachment.
Plos Pathog., 7, 2011
2YIA
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BU of 2yia by Molmil
Structure of the RNA polymerase VP1 from Infectious Pancreatic Necrosis Virus
Descriptor: POTASSIUM ION, RNA-DIRECTED RNA POLYMERASE
Authors:Graham, S.C, Sarin, L.P, Bahar, M.W, Myers, R.A, Stuart, D.I, Bamford, D.H, Grimes, J.M.
Deposit date:2011-05-11
Release date:2011-07-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.02 Å)
Cite:The N-Terminus of the RNA Polymerase from Infectious Pancreatic Necrosis Virus is the Determinant of Genome Attachment.
Plos Pathog., 7, 2011
2YI9
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Structure of the RNA polymerase VP1 from Infectious Pancreatic Necrosis Virus in complex with magnesium
Descriptor: CHLORIDE ION, MAGNESIUM ION, POTASSIUM ION, ...
Authors:Graham, S.C, Sarin, L.P, Bahar, M.W, Myers, R.A, Stuart, D.I, Bamford, D.H, Grimes, J.M.
Deposit date:2011-05-11
Release date:2011-07-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The N-Terminus of the RNA Polymerase from Infectious Pancreatic Necrosis Virus is the Determinant of Genome Attachment.
Plos Pathog., 7, 2011

 

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