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1UHV
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Crystal structure of beta-D-xylosidase from Thermoanaerobacterium saccharolyticum, a family 39 glycoside hydrolase
分子名称: 1,5-anhydro-2-deoxy-2-fluoro-D-xylitol, Beta-xylosidase
著者Yang, J.K, Yoon, H.J, Ahn, H.J, Il Lee, B, Pedelacq, J.D, Liong, E.C, Berendzen, J, Laivenieks, M, Vieille, C, Zeikus, G.J, Vocadlo, D.J, Withers, S.G, Suh, S.W.
登録日2003-07-11
公開日2003-12-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of beta-D-xylosidase from Thermoanaerobacterium saccharolyticum, a family 39 glycoside hydrolase.
J.Mol.Biol., 335, 2004
1UM0
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Crystal structure of chorismate synthase complexed with FMN
分子名称: Chorismate synthase, FLAVIN MONONUCLEOTIDE
著者Ahn, H.J, Yoon, H.J, Lee, B, Suh, S.W.
登録日2003-09-18
公開日2004-06-01
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of chorismate synthase: a novel FMN-binding protein fold and functional insights
J.Mol.Biol., 336, 2004
1UMF
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crystal structure of chorismate synthase
分子名称: Chorismate synthase
著者Ahn, H.J, Yoon, H.J, Lee, B, Suh, S.W.
登録日2003-09-30
公開日2004-06-01
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal structure of chorismate synthase: a novel FMN-binding protein fold and functional insights
J.Mol.Biol., 336, 2004
1B1Y
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BU of 1b1y by Molmil
SEVENFOLD MUTANT OF BARLEY BETA-AMYLASE
分子名称: PROTEIN (BETA-AMYLASE), alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose, beta-D-glucopyranose
著者Mikami, B, Yoon, H.J, Yoshigi, N.
登録日1998-11-25
公開日1998-12-02
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The crystal structure of the sevenfold mutant of barley beta-amylase with increased thermostability at 2.5 A resolution.
J.Mol.Biol., 285, 1999
2O4C
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BU of 2o4c by Molmil
Crystal Structure of D-Erythronate-4-phosphate Dehydrogenase Complexed with NAD
分子名称: Erythronate-4-phosphate dehydrogenase, GLYCEROL, L(+)-TARTARIC ACID, ...
著者Ha, J.Y, Lee, J.H, Kim, K.H, Kim, D.J, Lee, H.H, Kim, H.K, Yoon, H.J, Suh, S.W.
登録日2006-12-04
公開日2007-02-20
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of d-Erythronate-4-phosphate Dehydrogenase Complexed with NAD
J.Mol.Biol., 366, 2007
7E69
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BU of 7e69 by Molmil
The crystal structure of peptidoglycan peptidase in complex with inhibitor 3-3
分子名称: N-oxidanyl-4-[(4-sulfamoylphenyl)methyl]benzamide, Peptidase M23, ZINC ION
著者Choi, Y, Min, K.J, Yoon, H.J, Lee, H.H.
登録日2021-02-21
公開日2022-02-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022
7E65
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BU of 7e65 by Molmil
The crystal structure of peptidoglycan peptidase in complex with inhibitor 3
分子名称: (2S)-2-acetamido-N-[(2R)-1-(oxidanylamino)-1-oxidanylidene-propan-2-yl]-3-(4-sulfamoylphenyl)propanamide, Peptidase M23, ZINC ION
著者Choi, Y, Min, K.J, Yoon, H.J, Lee, H.H.
登録日2021-02-21
公開日2022-02-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022
7E60
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The crystal structure of peptidoglycan peptidase in complex with inhibitor 1
分子名称: (2~{R},6~{S})-2,6-diacetamido-7-[[(2~{R})-1-(oxidanylamino)-1-oxidanylidene-propan-2-yl]amino]-7-oxidanylidene-heptanoic acid, Peptidase M23, ZINC ION
著者Min, K, Yoon, H.J, Choi, Y, Lee, H.H.
登録日2021-02-21
公開日2022-02-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022
7E67
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The crystal structure of peptidoglycan peptidase in complex with inhibitor 3-2
分子名称: N-oxidanyl-2-[4-(4-sulfamoylphenyl)phenyl]ethanamide, Peptidase M23, ZINC ION
著者Choi, Y, Min, K.J, Yoon, H.J, Lee, H.H.
登録日2021-02-21
公開日2022-02-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022
7E61
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The crystal structure of peptidoglycan peptidase in complex with inhibitor 2
分子名称: 2-[[(3S)-3-acetamido-4-[[(2R)-1-(oxidanylamino)-1-oxidanylidene-propan-2-yl]amino]-4-oxidanylidene-butyl]-(phenylmethyl)amino]ethanoic acid, Peptidase M23, ZINC ION
著者Min, K.J, Yoon, H.J, Choi, Y, Lee, H.H.
登録日2021-02-21
公開日2022-02-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022
7E64
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The crystal structure of peptidoglycan peptidase in complex with inhibitor 2-2
分子名称: 2-[[(3S)-3-acetamido-4-[[(2R)-1-(oxidanylamino)-1-oxidanylidene-propan-2-yl]amino]-4-oxidanylidene-butyl]amino]ethanoic acid, Peptidase M23, ZINC ION
著者Choi, Y, Min, K.J, Yoon, H.J, Lee, H.H.
登録日2021-02-21
公開日2022-02-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022
7E63
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BU of 7e63 by Molmil
The crystal structure of peptidoglycan peptidase in complex with inhibitor 2-1
分子名称: 2-[[(3S)-3-acetamido-4-[[(2R)-1-(oxidanylamino)-1-oxidanylidene-propan-2-yl]amino]-4-oxidanylidene-butyl]-(cyclopentylmethyl)amino]ethanoic acid, Peptidase M23, ZINC ION
著者Choi, Y, Min, K.J, Yoon, H.J, Lee, H.H.
登録日2021-02-21
公開日2022-02-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022
7E66
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BU of 7e66 by Molmil
The crystal structure of peptidoglycan peptidase in complex with inhibitor 3-1
分子名称: N-[2-(oxidanylamino)-2-oxidanylidene-ethyl]-2-(4-sulfamoylphenyl)ethanamide, Peptidase M23, ZINC ION
著者Choi, Y, Min, K.J, Yoon, H.J, Lee, H.H.
登録日2021-02-21
公開日2022-02-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.84 Å)
主引用文献Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022
6JN8
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BU of 6jn8 by Molmil
Structure of H216A mutant open form peptidoglycan peptidase
分子名称: Peptidase M23, SULFATE ION, ZINC ION
著者Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H.
登録日2019-03-13
公開日2020-01-15
最終更新日2022-03-23
実験手法X-RAY DIFFRACTION (2.106 Å)
主引用文献Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
6JMZ
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BU of 6jmz by Molmil
Structure of H247A mutant open form peptidoglycan peptidase
分子名称: Peptidase M23, ZINC ION
著者Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H.
登録日2019-03-13
公開日2020-01-15
最終更新日2022-03-23
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
6JMX
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Structure of open form of peptidoglycan peptidase
分子名称: D(-)-TARTARIC ACID, GLYCEROL, Peptidase M23, ...
著者Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H.
登録日2019-03-13
公開日2020-01-15
最終更新日2022-03-23
実験手法X-RAY DIFFRACTION (1.859 Å)
主引用文献Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
6JN1
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Structure of H247A mutant peptidoglycan peptidase complex with penta peptide
分子名称: C0O-DAL-DAL, Peptidase M23, ZINC ION
著者Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H.
登録日2019-03-13
公開日2020-01-15
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.382 Å)
主引用文献Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
6JN0
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Structure of H247A mutant peptidoglycan peptidase complex with tetra-tri peptide
分子名称: C0O-DAL-API, Peptidase M23, ZINC ION
著者Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H.
登録日2019-03-13
公開日2020-01-15
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.164 Å)
主引用文献Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
6JN7
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Structure of H216A mutant closed form peptidoglycan peptidase
分子名称: D(-)-TARTARIC ACID, Peptidase M23, ZINC ION
著者Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H.
登録日2019-03-13
公開日2020-01-15
最終更新日2022-03-23
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
6JMY
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Structure of wild type closed form of peptidoglycan peptidase
分子名称: CITRIC ACID, Peptidase M23, ZINC ION
著者Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H.
登録日2019-03-13
公開日2020-01-15
最終更新日2022-03-23
実験手法X-RAY DIFFRACTION (1.661 Å)
主引用文献Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
4RNZ
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BU of 4rnz by Molmil
Structure of Helicobacter pylori Csd3 from the hexagonal crystal
分子名称: Conserved hypothetical secreted protein, GLYCEROL, NICKEL (II) ION, ...
著者An, D.R, Kim, H.S, Kim, J, Im, H.N, Yoon, H.J, Yoon, J.Y, Jang, J.Y, Hesek, D, Lee, M, Mobashery, S, Kim, S.-J, Lee, B.I, Suh, S.W.
登録日2014-10-27
公開日2015-03-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Structure of Csd3 from Helicobacter pylori, a cell shape-determining metallopeptidase.
Acta Crystallogr.,Sect.D, 71, 2015
4RNY
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Structure of Helicobacter pylori Csd3 from the orthorhombic crystal
分子名称: Conserved hypothetical secreted protein, GLYCEROL, SULFATE ION, ...
著者An, D.R, Kim, H.S, Kim, J, Im, H.N, Yoon, H.J, Yoon, J.Y, Jang, J.Y, Hesek, D, Lee, M, Mobashery, S, Kim, S.-J, Lee, B.I, Suh, S.W.
登録日2014-10-27
公開日2015-03-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of Csd3 from Helicobacter pylori, a cell shape-determining metallopeptidase.
Acta Crystallogr.,Sect.D, 71, 2015
3QY8
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Crystal structures of YwqE from Bacillus subtilis and CpsB from Streptococcus pneumoniae, unique metal-dependent tyrosine phosphatases
分子名称: FE (III) ION, GLYCEROL, MAGNESIUM ION, ...
著者Kim, H.S, Lee, S.J, Yoon, H.J, An, D.R, Kim, D.J, Kim, S.-J, Suh, S.W.
登録日2011-03-03
公開日2011-06-08
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of YwqE from Bacillus subtilis and CpsB from Streptococcus pneumoniae, unique metal-dependent tyrosine phosphatases.
J.Struct.Biol., 175, 2011
3QY7
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Crystal structures of YwqE from Bacillus subtilis and CpsB from Streptococcus pneumoniae, unique metal-dependent tyrosine phosphatases
分子名称: FE (III) ION, MAGNESIUM ION, PHOSPHATE ION, ...
著者Kim, H.S, Lee, S.J, Yoon, H.J, An, D.R, Kim, D.J, Kim, S.-J, Suh, S.W.
登録日2011-03-03
公開日2011-06-08
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Crystal structures of YwqE from Bacillus subtilis and CpsB from Streptococcus pneumoniae, unique metal-dependent tyrosine phosphatases.
J.Struct.Biol., 175, 2011
3QY6
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Crystal structures of YwqE from Bacillus subtilis and CpsB from Streptococcus pneumoniae, unique metal-dependent tyrosine phosphatases
分子名称: FE (III) ION, MAGNESIUM ION, Tyrosine-protein phosphatase YwqE
著者Kim, H.S, Lee, S.J, Yoon, H.J, An, D.R, Kim, D.J, Kim, S.-J, Suh, S.W.
登録日2011-03-03
公開日2011-06-08
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structures of YwqE from Bacillus subtilis and CpsB from Streptococcus pneumoniae, unique metal-dependent tyrosine phosphatases.
J.Struct.Biol., 175, 2011

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