Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3NP2
DownloadVisualize
BU of 3np2 by Molmil
Crystal Structure of Pd(allyl)/apo-E45C/C48A-rHLFr
分子名称: 1,2-ETHANEDIOL, CADMIUM ION, Ferritin light chain, ...
著者Wang, Z, Ueno, T, Abe, S, Takezawa, Y, Aoyagi, H, Hikage, T, Watanabe, Y, Kitagawa, S.
登録日2010-06-27
公開日2010-12-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Definite coordination arrangement of organometallic palladium complexes accumulated on the designed interior surface of apo-ferritin.
Chem.Commun.(Camb.), 47, 2011
3NP0
DownloadVisualize
BU of 3np0 by Molmil
Crystal Structure of Pd(allyl)/apo-E45C/H49A/R52H-rHLFr
分子名称: 1,2-ETHANEDIOL, CADMIUM ION, Ferritin light chain, ...
著者Wang, Z, Ueno, T, Abe, S, Takezawa, Y, Aoyagi, H, Hikage, T, Watanabe, Y, Kitagawa, S.
登録日2010-06-27
公開日2010-12-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Definite coordination arrangement of organometallic palladium complexes accumulated on the designed interior surface of apo-ferritin.
Chem.Commun.(Camb.), 47, 2011
3NOZ
DownloadVisualize
BU of 3noz by Molmil
Crystal Structure of Pd(allyl)/apo-E45C/R52H-rHLFr
分子名称: 1,2-ETHANEDIOL, CADMIUM ION, Ferritin light chain, ...
著者Wang, Z, Ueno, T, Abe, S, Takezawa, Y, Aoyagi, H, Hikage, T, Watanabe, Y, Kitagawa, S.
登録日2010-06-27
公開日2010-12-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Definite coordination arrangement of organometallic palladium complexes accumulated on the designed interior surface of apo-ferritin.
Chem.Commun.(Camb.), 47, 2011
4NA4
DownloadVisualize
BU of 4na4 by Molmil
Crystal structure of mouse poly(ADP-ribose) glycohydrolase (PARG) catalytic domain with ADP-HPD
分子名称: 5'-O-[(S)-{[(S)-{[(2R,3R,4S)-3,4-DIHYDROXYPYRROLIDIN-2-YL]METHOXY}(HYDROXY)PHOSPHORYL]OXY}(HYDROXY)PHOSPHORYL]ADENOSINE, IODIDE ION, Poly(ADP-ribose) glycohydrolase
著者Wang, Z, Cheng, Z, Xu, W.
登録日2013-10-21
公開日2014-01-29
最終更新日2014-09-24
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystallographic and biochemical analysis of the mouse poly(ADP-ribose) glycohydrolase.
Plos One, 9, 2014
4NA0
DownloadVisualize
BU of 4na0 by Molmil
Crystal structure of mouse poly(ADP-ribose) glycohydrolase (PARG) catalytic domain with ADPRibose
分子名称: IODIDE ION, Poly(ADP-ribose) glycohydrolase, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
著者Wang, Z, Cheng, Z, Xu, W.
登録日2013-10-21
公開日2014-01-29
最終更新日2014-09-24
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystallographic and biochemical analysis of the mouse poly(ADP-ribose) glycohydrolase.
Plos One, 9, 2014
4N9Y
DownloadVisualize
BU of 4n9y by Molmil
Crystal structure of mouse poly(ADP-ribose) glycohydrolase (PARG) catalytic domain mutant E748Q
分子名称: 2'-O-(5-O-phosphono-alpha-D-ribofuranosyl)adenosine 5'-(dihydrogen phosphate), Poly(ADP-ribose) glycohydrolase, SULFATE ION
著者Wang, Z, Cheng, Z, Xu, W.
登録日2013-10-21
公開日2014-01-29
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystallographic and biochemical analysis of the mouse poly(ADP-ribose) glycohydrolase.
Plos One, 9, 2014
4NA5
DownloadVisualize
BU of 4na5 by Molmil
Crystal structure of mouse poly(ADP-ribose) glycohydrolase (PARG) catalytic domain mutant E748N
分子名称: Poly(ADP-ribose) glycohydrolase, SULFATE ION
著者Wang, Z, Cheng, Z, Xu, W.
登録日2013-10-21
公開日2014-01-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystallographic and biochemical analysis of the mouse poly(ADP-ribose) glycohydrolase.
Plos One, 9, 2014
4NA6
DownloadVisualize
BU of 4na6 by Molmil
Crystal structure of mouse poly(ADP-ribose) glycohydrolase (PARG) catalytic domain mutant E749N
分子名称: Poly(ADP-ribose) glycohydrolase, SULFATE ION
著者Wang, Z, Cheng, Z, Xu, W.
登録日2013-10-21
公開日2014-01-29
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Crystallographic and biochemical analysis of the mouse poly(ADP-ribose) glycohydrolase.
Plos One, 9, 2014
4N9Z
DownloadVisualize
BU of 4n9z by Molmil
Crystal structure of mouse poly(ADP-ribose) glycohydrolase (PARG) catalytic domain mutant E749Q
分子名称: 2'-O-(5-O-phosphono-alpha-D-ribofuranosyl)adenosine 5'-(dihydrogen phosphate), Poly(ADP-ribose) glycohydrolase, SULFATE ION
著者Wang, Z, Cheng, Z, Xu, W.
登録日2013-10-21
公開日2014-01-29
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystallographic and biochemical analysis of the mouse poly(ADP-ribose) glycohydrolase.
Plos One, 9, 2014
5V5S
DownloadVisualize
BU of 5v5s by Molmil
multi-drug efflux; membrane transport; RND superfamily; Drug resistance
分子名称: Multidrug efflux pump subunit AcrA, Multidrug efflux pump subunit AcrB, Outer membrane protein TolC
著者wang, Z, fan, G, Hryc, C.F, Blaza, J.N, Serysheva, I.I, Schmid, M.F, Chiu, W, Luisi, B.F, Du, D.
登録日2017-03-15
公開日2017-04-19
最終更新日2019-10-23
実験手法ELECTRON MICROSCOPY (6.5 Å)
主引用文献An allosteric transport mechanism for the AcrAB-TolC Multidrug Efflux Pump.
Elife, 6, 2017
6IIR
DownloadVisualize
BU of 6iir by Molmil
Complex structure of the HRP3 PWWP domain with a 10-bp GC-rich DNA
分子名称: 10-bp GC-rich DNA, Hepatoma-derived growth factor-related protein 3
著者Wang, Z, Tian, W.
登録日2018-10-07
公開日2019-04-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Complex structure of the HRP3 PWWP domain with a 10-bp GC-rich DNA
Nucleic Acids Res., 2019
6IIP
DownloadVisualize
BU of 6iip by Molmil
Apo-form structure of the HRP3 PWWP domain
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Hepatoma-derived growth factor-related protein 3, SULFATE ION
著者Wang, Z, Tian, W.
登録日2018-10-07
公開日2019-04-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (0.951 Å)
主引用文献Apo-form structure of the HRP3 PWWP domain
Nucleic Acids Res., 2019
6IIQ
DownloadVisualize
BU of 6iiq by Molmil
Complex structure of the HRP3 PWWP domain with a 16-bp TA-rich DNA
分子名称: 16-bp TA-rich DNA, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Hepatoma-derived growth factor-related protein 3, ...
著者Wang, Z, Tian, W.
登録日2018-10-07
公開日2019-04-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Complex structure of the HRP3 PWWP domain with a 16-bp TA-rich DNA
Nucleic Acids Res., 2019
6IIS
DownloadVisualize
BU of 6iis by Molmil
Complex structure of the HRP3 PWWP domain with both a 16-bp TA-rich DNA and an H3K36me3-containing histone peptide
分子名称: 16-bp TA-rich DNA, H3K36me3 peptide, Hepatoma-derived growth factor-related protein 3
著者Wang, Z, Tian, W.
登録日2018-10-07
公開日2019-04-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.358 Å)
主引用文献Complex structure of the HRP3 PWWP domain with both a 16-bp TA-rich DNA and an H3K36me3-containing histone peptide
Nucleic Acids Res., 2019
6IIT
DownloadVisualize
BU of 6iit by Molmil
Complex structure of the HRP3 PWWP domain with both a 16-bp TA-rich DNA and an H3K36me2-containing histone peptide
分子名称: 16-bp TA-rich DNA, H3K36me2-containing histone peptide, Hepatoma-derived growth factor-related protein 3
著者Wang, Z, Tian, W.
登録日2018-10-07
公開日2019-04-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Complex structure of the HRP3 PWWP domain with both a 16-bp TA-rich DNA and a H3K36me2-containing histone peptide
Nucleic Acids Res., 2019
2HHI
DownloadVisualize
BU of 2hhi by Molmil
The solution structure of antigen MPT64 from Mycobacterium tuberculosis defines a novel class of beta-grasp proteins
分子名称: Immunogenic protein MPT64
著者Wang, Z, Potter, B.M, Gray, A.M, Sacksteder, K.A, Geisbrecht, B.V, Laity, J.H.
登録日2006-06-28
公開日2006-12-05
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献The Solution Structure of Antigen MPT64 from Mycobacterium tuberculosis Defines a New Family of Beta-Grasp Proteins.
J.Mol.Biol., 366, 2007
4H10
DownloadVisualize
BU of 4h10 by Molmil
Intermolecular recognition revealed by the complex structure of human CLOCK-BMAL1 basic Helix-Loop-Helix domains with E-box DNA
分子名称: Aryl hydrocarbon receptor nuclear translocator-like protein 1, Circadian locomoter output cycles protein kaput, E-box DNA antisense strand, ...
著者Wang, Z, Su, X.-D.
登録日2012-09-10
公開日2012-12-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.402 Å)
主引用文献Intermolecular recognition revealed by the complex structure of human CLOCK-BMAL1 basic helix-loop-helix domains with E-box DNA.
Cell Res., 23, 2013
2LBS
DownloadVisualize
BU of 2lbs by Molmil
Solution structure of double-stranded RNA binding domain of S. cerevisiae RNase III (Rnt1p) in complex with AAGU tetraloop hairpin
分子名称: RNA (32-MER), Ribonuclease 3
著者Wang, Z, Hartman, E, Roy, K, Chanfreau, G, Feigon, J.
登録日2011-04-06
公開日2011-08-31
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure of a Yeast RNase III dsRBD Complex with a Noncanonical RNA Substrate Provides New Insights into Binding Specificity of dsRBDs.
Structure, 19, 2011
4KVC
DownloadVisualize
BU of 4kvc by Molmil
2H2 Fab fragment of immature Dengue virus
分子名称: Ig heavy chain V region MOPC 21, Igh protein, Ig kappa chain V-V region MOPC 21, ...
著者Wang, Z, Rossmann, M.G.
登録日2013-05-22
公開日2013-07-24
最終更新日2017-08-02
実験手法X-RAY DIFFRACTION (2.306 Å)
主引用文献Obstruction of Dengue Virus Maturation by Fab Fragments of the 2H2 Antibody.
J.Virol., 87, 2013
2LUP
DownloadVisualize
BU of 2lup by Molmil
RDC refined solution structure of double-stranded RNA binding domain of S. cerevisiae RNase III (rnt1p) in complex with the terminal RNA hairpin of snr47 precursor
分子名称: RNA (32-MER), Ribonuclease 3
著者Wang, Z, Feigon, J.
登録日2012-06-19
公開日2012-07-04
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure of a yeast RNase III dsRBD complex with a noncanonical RNA substrate provides new insights into binding specificity of dsRBDs.
Structure, 19, 2011
4L9A
DownloadVisualize
BU of 4l9a by Molmil
Crystal structure of Smu.1393c from cariogenic pathogen Streptococcus mutans
分子名称: GLYCEROL, Putative uncharacterized protein Smu.1393c
著者Wang, Z, Li, L, Su, X.-D.
登録日2013-06-18
公開日2013-07-17
最終更新日2022-08-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and functional characterization of a novel alpha / beta hydrolase from cariogenic pathogen Streptococcus mutans.
Proteins, 82, 2014
2NRY
DownloadVisualize
BU of 2nry by Molmil
Crystal structure of IRAK-4
分子名称: STAUROSPORINE, interleukin-1 receptor-associated kinase 4
著者Wang, Z, Liu, J, Walker, N.P.C.
登録日2006-11-02
公開日2006-12-12
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal structures of IRAK-4 kinase in complex with inhibitors: a serine/threonine kinase with tyrosine as a gatekeeper.
Structure, 14, 2006
2NRU
DownloadVisualize
BU of 2nru by Molmil
Crystal structure of IRAK-4
分子名称: 1-(3-HYDROXYPROPYL)-2-[(3-NITROBENZOYL)AMINO]-1H-BENZIMIDAZOL-5-YL PIVALATE, Interleukin-1 receptor-associated kinase 4, SULFATE ION
著者Wang, Z, Liu, J, Walker, N.P.C.
登録日2006-11-02
公開日2006-12-12
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of IRAK-4 kinase in complex with inhibitors: a serine/threonine kinase with tyrosine as a gatekeeper.
Structure, 14, 2006
4Q2J
DownloadVisualize
BU of 4q2j by Molmil
A novel structure-based mechanism for DNA-binding of SATB1
分子名称: DNA-binding protein SATB1
著者Wang, Z, Long, J, Yang, X, Shen, Y.
登録日2014-04-08
公開日2015-03-11
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.603 Å)
主引用文献Crystal structure of the ubiquitin-like domain-CUT repeat-like tandem of special AT-rich sequence binding protein 1 (SATB1) reveals a coordinating DNA-binding mechanism.
J.Biol.Chem., 289, 2014
5NG5
DownloadVisualize
BU of 5ng5 by Molmil
multi-drug efflux; membrane transport; RND superfamily; Drug resistance
分子名称: 6-[2-(3,4-dimethoxyphenyl)ethylsulfanyl]-8-[4-(2-methoxyethyl)piperazin-1-yl]-3,3-dimethyl-1,4-dihydropyrano[3,4-c]pyridine-5-carbonitrile, Multidrug efflux pump accessory protein AcrZ, Multidrug efflux pump subunit AcrA, ...
著者Wang, Z, Fan, G, Hryc, C.F, Blaza, J.N, Serysheva, I.I, Schmid, M.F, Chiu, W, Luisi, B.F, Du, D.
登録日2017-03-16
公開日2017-04-19
最終更新日2017-08-02
実験手法ELECTRON MICROSCOPY (6.5 Å)
主引用文献An allosteric transport mechanism for the AcrAB-TolC Multidrug Efflux Pump.
Elife, 6, 2017

219869

件を2024-05-15に公開中

PDB statisticsPDBj update infoContact PDBjnumon