Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3G4Q
DownloadVisualize
BU of 3g4q by Molmil
Ligand migration and cavities within scapharca dimeric hemoglobin: wild type with co bound to heme and chloroform bound to the XE4 cavity
Descriptor: CARBON MONOXIDE, Globin-1, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Knapp, J.E, Pahl, R, Cohen, J, Nichols, J.C, Schulten, K, Gibson, Q.H, Srajer, V, Royer Jr, W.E.
Deposit date:2009-02-04
Release date:2009-12-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Ligand migration and cavities within Scapharca Dimeric HbI: studies by time-resolved crystallo-graphy, Xe binding, and computational analysis.
Structure, 17, 2009
3G4U
DownloadVisualize
BU of 3g4u by Molmil
Ligand migration and cavities within scapharca dimeric hemoglobin: wild type with co bound to heme and dichloropropane bound to the XE4 cavity
Descriptor: 1,3-dichloropropane, CARBON MONOXIDE, GLOBIN-1, ...
Authors:Knapp, J.E, Pahl, R, Cohen, J, Nichols, J.C, Schulten, K, Gibson, Q.H, Srajer, V, Royer Jr, W.E.
Deposit date:2009-02-04
Release date:2009-12-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Ligand migration and cavities within Scapharca Dimeric HbI: studies by time-resolved crystallo-graphy, Xe binding, and computational analysis.
Structure, 17, 2009
3G4Y
DownloadVisualize
BU of 3g4y by Molmil
Ligand migration and cavities within scapharca dimeric hemoglobin: wild type with co bound to heme and chloromethyl benzene bound to the XE4 cavity
Descriptor: (chloromethyl)benzene, CARBON MONOXIDE, GLOBIN-1, ...
Authors:Knapp, J.E, Pahl, R, Cohen, J, Nichols, J.C, Schulten, K, Gibson, Q.H, Srajer, V, Royer Jr, W.E.
Deposit date:2009-02-04
Release date:2009-12-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Ligand migration and cavities within Scapharca Dimeric HbI: studies by time-resolved crystallo-graphy, Xe binding, and computational analysis.
Structure, 17, 2009
3G53
DownloadVisualize
BU of 3g53 by Molmil
Ligand migration and cavities within scapharca dimeric hemoglobin: wild type with co bound to heme and chloropropyl benzene bound to the XE4 cavity
Descriptor: (3-chloropropyl)benzene, CARBON MONOXIDE, Globin-1, ...
Authors:Knapp, J.E, Pahl, R, Cohen, J, Nichols, J.C, Schulten, K, Gibson, Q.H, Srajer, V, Royer Jr, W.E.
Deposit date:2009-02-04
Release date:2009-12-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Ligand migration and cavities within Scapharca Dimeric HbI: studies by time-resolved crystallo-graphy, Xe binding, and computational analysis.
Structure, 17, 2009
3G4V
DownloadVisualize
BU of 3g4v by Molmil
Ligand migration and cavities within scapharca dimeric hemoglobin: wild type with co bound to heme and chloropentane bound to the XE4 cavity
Descriptor: 1-chloropentane, CARBON MONOXIDE, GLOBIN-1, ...
Authors:Knapp, J.E, Pahl, R, Cohen, J, Nichols, J.C, Schulten, K, Gibson, Q.H, Srajer, V, Royer Jr, W.E.
Deposit date:2009-02-04
Release date:2009-12-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Ligand migration and cavities within Scapharca Dimeric HbI: studies by time-resolved crystallo-graphy, Xe binding, and computational analysis.
Structure, 17, 2009
3G52
DownloadVisualize
BU of 3g52 by Molmil
Ligand migration and cavities within scapharca dimeric hemoglobin: wild type with co bound to heme and chloroethyl benzene bound to the XE4 cavity
Descriptor: (2-chloroethyl)benzene, CARBON MONOXIDE, GLOBIN-1, ...
Authors:Knapp, J.E, Pahl, R, Cohen, J, Nichols, J.C, Schulten, K, Gibson, Q.H, Srajer, V, Royer Jr, W.E.
Deposit date:2009-02-04
Release date:2009-12-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Ligand migration and cavities within Scapharca Dimeric HbI: studies by time-resolved crystallo-graphy, Xe binding, and computational analysis.
Structure, 17, 2009
3G4R
DownloadVisualize
BU of 3g4r by Molmil
Ligand migration and cavities within scapharca dimeric hemoglobin: wild type with co bound to HEME and dichloroethane bound to the XE4 cavity
Descriptor: 1,2-DICHLOROETHANE, CARBON MONOXIDE, Globin-1, ...
Authors:Knapp, J.E, Pahl, R, Cohen, J, Nichols, J.C, Schulten, K, Gibson, Q.H, Srajer, V, Royer Jr, W.E.
Deposit date:2009-02-04
Release date:2009-12-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Ligand migration and cavities within Scapharca Dimeric HbI: studies by time-resolved crystallo-graphy, Xe binding, and computational analysis.
Structure, 17, 2009
3SDH
DownloadVisualize
BU of 3sdh by Molmil
HIGH RESOLUTION CRYSTALLOGRAPHIC ANALYSIS OF A COOPERATIVE DIMERIC HEMOGLOBIN
Descriptor: CARBON MONOXIDE, HEMOGLOBIN I (CARBONMONOXY), PROTOPORPHYRIN IX CONTAINING FE
Authors:Royerjunior, W.E.
Deposit date:1993-06-23
Release date:1993-10-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:High-resolution crystallographic analysis of a co-operative dimeric hemoglobin.
J.Mol.Biol., 235, 1994
3DSH
DownloadVisualize
BU of 3dsh by Molmil
Crystal structure of dimeric interferon regulatory factor 5 (IRF-5) transactivation domain
Descriptor: Interferon regulatory factor 5
Authors:Chen, W, Lam, S.S, Srinath, H, Jiang, Z, Correia, J.J, Schiffer, C, Fitzgerald, K.A, Lin, K, Royer Jr, W.E.
Deposit date:2008-07-12
Release date:2008-10-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Insights into interferon regulatory factor activation from the crystal structure of dimeric IRF5.
Nat.Struct.Mol.Biol., 15, 2008
6NS6
DownloadVisualize
BU of 6ns6 by Molmil
Crystal structure of fungal lipoxygenase from Fusarium graminearum. P21 crystal form.
Descriptor: FE (II) ION, lipoxygenase
Authors:Pakhomova, S, Boeglin, W.E, Neau, D.B, Bartlett, S.G, Brash, A.R, Newcomer, M.E.
Deposit date:2019-01-24
Release date:2019-03-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:An ensemble of lipoxygenase structures reveals novel conformations of the Fe coordination sphere.
Protein Sci., 28, 2019
6NS5
DownloadVisualize
BU of 6ns5 by Molmil
Crystal structure of fungal lipoxygenase from Fusarium graminearum. Second C2 crystal form.
Descriptor: FE (II) ION, lipoxygenase
Authors:Pakhomova, S, Boeglin, W.E, Neau, D.B, Bartlett, S.G, Brash, A.R, Newcomer, M.E.
Deposit date:2019-01-24
Release date:2019-03-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:An ensemble of lipoxygenase structures reveals novel conformations of the Fe coordination sphere.
Protein Sci., 28, 2019
6NS2
DownloadVisualize
BU of 6ns2 by Molmil
Crystal structure of fungal lipoxygenase from Fusarium graminearum. P212121 crystal form.
Descriptor: FE (II) ION, lipoxygenase
Authors:Pakhomova, S, Boeglin, W.E, Neau, D.B, Bartlett, S.G, Brash, A.R, Newcomer, M.E.
Deposit date:2019-01-24
Release date:2019-03-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:An ensemble of lipoxygenase structures reveals novel conformations of the Fe coordination sphere.
Protein Sci., 28, 2019
6NS3
DownloadVisualize
BU of 6ns3 by Molmil
Crystal structure of fungal lipoxygenase from Fusarium graminearum. I222 crystal form.
Descriptor: FE (II) ION, lipoxygenase
Authors:Pakhomova, S, Boeglin, W.E, Neau, D.B, Bartlett, S.G, Brash, A.R, Newcomer, M.E.
Deposit date:2019-01-24
Release date:2019-03-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:An ensemble of lipoxygenase structures reveals novel conformations of the Fe coordination sphere.
Protein Sci., 28, 2019
6NS4
DownloadVisualize
BU of 6ns4 by Molmil
Crystal structure of fungal lipoxygenase from Fusarium graminearum. C2 crystal form.
Descriptor: ACETATE ION, FE (II) ION, GLYCEROL, ...
Authors:Pakhomova, S, Boeglin, W.E, Neau, D.B, Bartlett, S.G, Brash, A.R, Newcomer, M.E.
Deposit date:2019-01-24
Release date:2019-03-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:An ensemble of lipoxygenase structures reveals novel conformations of the Fe coordination sphere.
Protein Sci., 28, 2019
1NWI
DownloadVisualize
BU of 1nwi by Molmil
Crystal structure of CO-HbI transformed to an unligated state
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, globin I
Authors:Knapp, J.E, Royer JR, W.E.
Deposit date:2003-02-06
Release date:2003-08-26
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Ligand-linked structural transitions in crystals of a cooperative dimeric hemoglobin.
Biochemistry, 42, 2003
6OKC
DownloadVisualize
BU of 6okc by Molmil
Crosslinked Crystal Structure of Type II Fatty Acid Synthase Ketosynthase, FabB, and C12-crypto Acyl Carrier Protein, AcpP
Descriptor: 3-oxoacyl-[acyl-carrier-protein] synthase 1, Acyl carrier protein, N-[2-(dodecanoylamino)ethyl]-N~3~-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alaninamide
Authors:Mindrebo, J.T, Kim, W.E, Bartholow, T.G, Chen, A, Davis, T.D, La Clair, J, Burkart, M.D, Noel, J.P.
Deposit date:2019-04-12
Release date:2020-04-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Gating mechanism of elongating beta-ketoacyl-ACP synthases.
Nat Commun, 11, 2020
6OKG
DownloadVisualize
BU of 6okg by Molmil
Crosslinked Crystal Structure of Type II Fatty Acid Synthase Ketosynthase, FabF, and C16-crypto Acyl Carrier Protein, AcpP
Descriptor: 3-oxoacyl-[acyl-carrier-protein] synthase 2, Acyl carrier protein, N-[2-(hexadecanoylamino)ethyl]-N~3~-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alaninamide, ...
Authors:Mindrebo, J.T, Kim, W.E, Bartholow, T.G, Chen, A, Davis, T.D, La Clair, J, Burkart, M.D, Noel, J.P.
Deposit date:2019-04-12
Release date:2020-04-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Gating mechanism of elongating beta-ketoacyl-ACP synthases.
Nat Commun, 11, 2020
6OM8
DownloadVisualize
BU of 6om8 by Molmil
Caenorhabditis Elegans UDP-Glucose Dehydrogenase in complex with UDP-Xylose
Descriptor: UDP-glucose 6-dehydrogenase, URIDINE-5'-DIPHOSPHATE-XYLOPYRANOSE
Authors:Beattie, N.R, McDonald, W.E, Hicks Sirmans, T.N, Wood, Z.A.
Deposit date:2019-04-18
Release date:2019-05-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.449 Å)
Cite:Conservation of Atypical Allostery inC. elegansUDP-Glucose Dehydrogenase.
Acs Omega, 4, 2019
6OLT
DownloadVisualize
BU of 6olt by Molmil
Crosslinked Crystal Structure of Type II Fatty Acid Synthase Ketosynthase, FabF, and C12-crypto Acyl Carrier Protein, AcpP
Descriptor: 3-oxoacyl-[acyl-carrier-protein] synthase 2, Acyl carrier protein, N-[2-(dodecanoylamino)ethyl]-N~3~-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alaninamide
Authors:Mindrebo, J.T, Kim, W.E, Bartholow, T.G, Chen, A, Davis, T.D, La Clair, J, Burkart, M.D, Noel, J.P.
Deposit date:2019-04-17
Release date:2020-04-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Gating mechanism of elongating beta-ketoacyl-ACP synthases.
Nat Commun, 11, 2020
1NWN
DownloadVisualize
BU of 1nwn by Molmil
Crystals of CO-HbI in which the structure was converted to its unligated state, and then converted back to its original CO-ligated state.
Descriptor: CARBON MONOXIDE, PROTOPORPHYRIN IX CONTAINING FE, globin I
Authors:Knapp, J.E, Royer JR, W.E.
Deposit date:2003-02-06
Release date:2003-08-26
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Ligand-linked structural transitions in crystals of a cooperative dimeric hemoglobin.
Biochemistry, 42, 2003
6OKF
DownloadVisualize
BU of 6okf by Molmil
Crosslinked Crystal Structure of Type II Fatty Acid Synthase Ketosynthase, FabB, and C16-crypto Acyl Carrier Protein, AcpP
Descriptor: 3-oxoacyl-[acyl-carrier-protein] synthase 1, Acyl carrier protein, N-[2-(dodecanoylamino)ethyl]-N~3~-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alaninamide, ...
Authors:Mindrebo, J.T, Kim, W.E, Bartholow, T.G, Chen, A, Davis, T.D, La Clair, J, Burkart, M.D, Noel, J.P.
Deposit date:2019-04-12
Release date:2020-04-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Gating mechanism of elongating beta-ketoacyl-ACP synthases.
Nat Commun, 11, 2020
2AUR
DownloadVisualize
BU of 2aur by Molmil
F97V (no ligand bound)
Descriptor: Globin I, PROTOPORPHYRIN IX CONTAINING FE
Authors:Knapp, J.E, Bonham, M.A, Gibson, Q.H, Nichols, J.C, Royer Jr, W.E.
Deposit date:2005-08-28
Release date:2006-03-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Residue F4 plays a key role in modulating oxygen affinity and cooperativity in Scapharca dimeric hemoglobin
Biochemistry, 44, 2005
2AUQ
DownloadVisualize
BU of 2auq by Molmil
HbI (F97V) CO bound
Descriptor: CARBON MONOXIDE, Globin I, PROTOPORPHYRIN IX CONTAINING FE
Authors:Knapp, J.E, Bonham, M.A, Gibson, Q.H, Nichols, J.C, Royer Jr, W.E.
Deposit date:2005-08-28
Release date:2006-03-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Residue F4 plays a key role in modulating oxygen affinity and cooperativity in Scapharca dimeric hemoglobin
Biochemistry, 44, 2005
2AUO
DownloadVisualize
BU of 2auo by Molmil
Residue F4 plays a key role in modulating the oxygen affinity and cooperatrivity in Scapharca dimeric hemoglobin
Descriptor: CARBON MONOXIDE, Globin I, PROTOPORPHYRIN IX CONTAINING FE
Authors:Knapp, J.E, Bonham, M.A, Gibson, Q.H, Nichols, J.C, Royer Jr, W.E.
Deposit date:2005-08-28
Release date:2006-03-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Residue F4 plays a key role in modulating oxygen affinity and cooperativity in Scapharca dimeric hemoglobin
Biochemistry, 44, 2005
2AUP
DownloadVisualize
BU of 2aup by Molmil
Residue F4 plays a key role in modulating oxygen affinity and cooperativity in Scapharca dimeric hemoglobin
Descriptor: Globin I, PROTOPORPHYRIN IX CONTAINING FE
Authors:Knapp, J.E, Bonham, M.A, Gibson, Q.H, Nichols, J.C, Royer Jr, W.E.
Deposit date:2005-08-28
Release date:2006-03-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Residue F4 plays a key role in modulating oxygen affinity and cooperativity in Scapharca dimeric hemoglobin
Biochemistry, 44, 2005

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon