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2VOJ
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BU of 2voj by Molmil
Ternary complex of M. tuberculosis Rv2780 with NAD and pyruvate
分子名称: (2S)-2-HYDROXYPROPANOIC ACID, ALANINE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Tripathi, S.M, Ramachandran, R.
登録日2008-02-18
公開日2008-03-04
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal Structures of the Mycobacterium Tuberculosis Secretory Antigen Alanine Dehydrogenase (Rv2780) in Apo and Ternary Complex Forms Captures "Open" and "Closed" Enzyme Conformations.
Proteins: Struct., Funct., Bioinf., 72, 2008
2VOE
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BU of 2voe by Molmil
Crystal structure of Rv2780 from M. tuberculosis H37Rv
分子名称: ALANINE DEHYDROGENASE
著者Tripathi, S.M, Ramachandran, R.
登録日2008-02-17
公開日2008-03-04
最終更新日2012-01-18
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal Structures of the Mycobacterium Tuberculosis Secretory Antigen Alanine Dehydrogenase (Rv2780) in Apo and Ternary Complex Forms Captures "Open" and "Closed" Enzyme Conformations.
Proteins, 72, 2008
2JJF
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BU of 2jjf by Molmil
N328A mutant of M. tuberculosis Rv3290c
分子名称: L-LYSINE EPSILON AMINOTRANSFERASE
著者tripathi, S.M, Ramachandran, R.
登録日2008-04-04
公開日2009-06-30
最終更新日2017-01-25
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Mutational Analysis of Mycobacterium Tuberculosis Lysine Epsilon-Aminotransferase and Inhibitor Co-Crystal Structures, Reveals Distinct Binding Modes.
Biochem.Biophys.Res.Commun., 463, 2015
2JJH
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BU of 2jjh by Molmil
E243 mutant of M. tuberculosis Rv3290C
分子名称: 2-OXOGLUTARIC ACID, L-LYSINE EPSILON AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
著者Tripathi, S.M, Ramachandran, R.
登録日2008-04-04
公開日2009-06-30
最終更新日2020-01-15
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Mutational Analysis of Mycobacterium Tuberculosis Lysine Epsilon-Aminotransferase and Inhibitor Co-Crystal Structures, Reveals Distinct Binding Modes.
Biochem.Biophys.Res.Commun., 463, 2015
2JJG
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BU of 2jjg by Molmil
Crystal structure of the M. tuberculosis Lysine-epsilon aminotransferase (Rv3290c) complexed to an inhibitor
分子名称: (2S)-1-methyl-2-[(2S,4R)-2-methyl-4-phenylpentyl]piperidine, L-LYSINE EPSILON AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
著者Tripathi, S.M, Ramachandran, R.
登録日2008-04-04
公開日2009-06-30
最終更新日2017-01-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Mutational Analysis of Mycobacterium Tuberculosis Lysine Epsilon-Aminotransferase and Inhibitor Co-Crystal Structures, Reveals Distinct Binding Modes.
Biochem.Biophys.Res.Commun., 463, 2015
2JJE
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BU of 2jje by Molmil
Crystal structure of T330S mutant of Rv3290c from M. tuberculosis
分子名称: L-LYSINE EPSILON AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
著者Tripathi, S.M, Ramachandran, R.
登録日2008-04-03
公開日2009-06-30
最終更新日2020-01-15
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Mutational Analysis of Mycobacterium Tuberculosis Lysine Epsilon-Aminotransferase and Inhibitor Co-Crystal Structures, Reveals Distinct Binding Modes.
Biochem.Biophys.Res.Commun., 463, 2015
2CIN
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BU of 2cin by Molmil
Lysine aminotransferase from M. tuberculosis in the internal aldimine form
分子名称: L-LYSINE-EPSILON AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
著者Tripathi, S.M, Ramachandran, R.
登録日2006-03-24
公開日2006-08-14
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Direct Evidence for a Glutamate Switch Necessary for Substrate Recognition: Crystal Structures of Lysine Epsilon-Aminotransferase (Rv3290C) from Mycobacterium Tuberculosis H37Rv.
J.Mol.Biol., 362, 2006
2CJH
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BU of 2cjh by Molmil
Lysine aminotransferase from M. tuberculosis in the internal aldimine form with bound substrate 2-ketoglutarate
分子名称: 2-OXOGLUTARIC ACID, L-LYSINE-EPSILON AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
著者Tripathi, S.M, Ramachandran, R.
登録日2006-04-03
公開日2006-08-14
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Direct Evidence for a Glutamate Switch Necessary for Substrate Recognition: Crystal Structures of Lysine Epsilon-Aminotransferase (Rv3290C) from Mycobacterium Tuberculosis H37Rv.
J.Mol.Biol., 362, 2006
2CJG
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BU of 2cjg by Molmil
Lysine aminotransferase from M. tuberculosis in bound PMP form
分子名称: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, L-LYSINE-EPSILON AMINOTRANSFERASE
著者Tripathi, S.M, Ramachandran, R.
登録日2006-04-01
公開日2006-08-14
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Direct Evidence for a Glutamate Switch Necessary for Substrate Recognition: Crystal Structures of Lysine Epsilon-Aminotransferase (Rv3290C) from Mycobacterium Tuberculosis H37Rv.
J.Mol.Biol., 362, 2006
2CJD
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BU of 2cjd by Molmil
Lysine aminotransferase from M. tuberculosis in external aldimine form
分子名称: L-LYSINE-EPSILON AMINOTRANSFERASE, LYSINE, PYRIDOXAL-5'-PHOSPHATE
著者Tripathi, S.M, Ramachandran, R.
登録日2006-03-31
公開日2006-08-14
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Direct Evidence for a Glutamate Switch Necessary for Substrate Recognition: Crystal Structures of Lysine Epsilon-Aminotransferase (Rv3290C) from Mycobacterium Tuberculosis H37Rv.
J.Mol.Biol., 362, 2006
5FD3
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BU of 5fd3 by Molmil
Structure of Lin54 tesmin domain bound to DNA
分子名称: DNA (5'-D(*CP*AP*GP*TP*TP*TP*CP*AP*AP*AP*CP*TP*C)-3'), DNA (5'-D(*GP*AP*GP*TP*TP*TP*GP*AP*AP*AP*CP*T)-3'), Protein lin-54 homolog, ...
著者Marceau, A.H, Felthousen, J.G, Goetsch, P.D, Lee, H, Tripathi, S.M, Strome, S, Litovchick, L, Rubin, S.M.
登録日2015-12-15
公開日2016-08-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.42 Å)
主引用文献Structural basis for LIN54 recognition of CHR elements in cell cycle-regulated promoters.
Nat Commun, 7, 2016
8GCI
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BU of 8gci by Molmil
Crystal structure of C. elegans LIN-42 PAS-B domain
分子名称: Period protein homolog lin-42
著者Spangler, B.K, Coronado, A.R, Tripathi, S.M, Ward, J.D, Partch, C.L.
登録日2023-03-01
公開日2023-03-15
実験手法X-RAY DIFFRACTION (2.42 Å)
主引用文献Crystal structure of C. elegans LIN-42 PAS-B domain
To Be Published
6U1Q
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BU of 6u1q by Molmil
Crystal Structure of VpsO (VC0937) Kinase domain
分子名称: O-PHOSPHOTYROSINE, VpsO
著者Tripathi, S.M, Schwechheimer, C, Herbert, K, Porcella, M.E, Brown, E.R, Yildiz, F.H, Rubin, S.M.
登録日2019-08-16
公開日2020-08-19
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.87 Å)
主引用文献A tyrosine phosphoregulatory system controls exopolysaccharide biosynthesis and biofilm formation in Vibrio cholerae.
Plos Pathog., 16, 2020
6U1P
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BU of 6u1p by Molmil
Crystal structure of VpsU (VC0916) from Vibrio cholerae
分子名称: GLYCEROL, Low molecular weight phosphotyrosine protein phosphatase
著者Tripathi, S.M, Schwechheimer, C, Herbert, K, Osorio, J, Yildiz, F.H, Rubin, S.M.
登録日2019-08-16
公開日2020-08-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.201 Å)
主引用文献A tyrosine phosphoregulatory system controls exopolysaccharide biosynthesis and biofilm formation in Vibrio cholerae.
Plos Pathog., 16, 2020
8CUR
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BU of 8cur by Molmil
Crystal structure of Cdk2 in complex with Cyclin A inhibitor 6-[(E)-2-(4-chlorophenyl)ethenyl]-2-{[(2R)-3-(4-hydroxyphenyl)-1-methoxy-1-oxopropan-2-yl]carbamoyl}quinoline-4-carboxylic acid
分子名称: 6-[(E)-2-(4-chlorophenyl)ethenyl]-2-{[(2R)-3-(4-hydroxyphenyl)-1-methoxy-1-oxopropan-2-yl]carbamoyl}quinoline-4-carboxylic acid, Cyclin-dependent kinase 2
著者Tripathi, S.M, Tambo, C.S, Kiss, G, Rubin, S.M.
登録日2022-05-17
公開日2023-04-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Biolayer Interferometry Assay for Cyclin-Dependent Kinase-Cyclin Association Reveals Diverse Effects of Cdk2 Inhibitors on Cyclin Binding Kinetics.
Acs Chem.Biol., 18, 2023
4JX1
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BU of 4jx1 by Molmil
Crystal structure of reduced Cytochrome P450cam-putidaredoxin complex bound to camphor and 5-exo-hydroxycamphor
分子名称: 1,1'-hexane-1,6-diyldipyrrolidine-2,5-dione, 5-EXO-HYDROXYCAMPHOR, CALCIUM ION, ...
著者Tripathi, S.M, Li, H, Poulos, T.L.
登録日2013-03-27
公開日2013-06-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.087 Å)
主引用文献Structural basis for effector control and redox partner recognition in cytochrome P450.
Science, 340, 2013
4IMH
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BU of 4imh by Molmil
Crystal Structure of Cytoplasmic Heme Binding Protein, PhuS, from Pseudomonas aeruginosa
分子名称: Hemin degrading factor
著者Tripathi, S.M, Poulos, T.L.
登録日2013-01-02
公開日2013-09-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.976 Å)
主引用文献Crystal structure of the Pseudomonas aeruginosa cytoplasmic heme binding protein, Apo-PhuS.
J.Inorg.Biochem., 128C, 2013
4JWU
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BU of 4jwu by Molmil
Crystal structure of Cytochrome P450cam-putidaredoxin complex
分子名称: 1,1'-hexane-1,6-diyldipyrrolidine-2,5-dione, CALCIUM ION, Camphor 5-monooxygenase, ...
著者Tripathi, S.M, Li, H, Poulos, T.L.
登録日2013-03-27
公開日2013-06-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis for effector control and redox partner recognition in cytochrome P450.
Science, 340, 2013
4JWS
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BU of 4jws by Molmil
Crystal structure of Cytochrome P450cam-putidaredoxin complex
分子名称: 1,1'-hexane-1,6-diyldipyrrolidine-2,5-dione, CALCIUM ION, Camphor 5-monooxygenase, ...
著者Tripathi, S.M, Li, H, Poulos, T.L.
登録日2013-03-27
公開日2013-06-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural basis for effector control and redox partner recognition in cytochrome P450.
Science, 340, 2013
6CPB
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BU of 6cpb by Molmil
Crystal structure of the heme domain of CooA from Carboxydothermus hydrogenoformans
分子名称: Carbon monoxide oxidation system transcription regulator CooA-1, GLYCEROL, SULFATE ION
著者Tripathi, S.M, Poulos, T.L.
登録日2018-03-13
公開日2018-05-16
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.155 Å)
主引用文献Testing the N-Terminal Velcro Model of CooA Carbon Monoxide Activation.
Biochemistry, 57, 2018
4FB2
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BU of 4fb2 by Molmil
Crystal Structure of Substrate-Free P450cin
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, P450cin, ...
著者Madrona, Y, Tripathi, S.M, Li, H, Poulos, T.L.
登録日2012-05-22
公開日2012-07-18
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.37 Å)
主引用文献Crystal structures of substrate-free and nitrosyl cytochrome p450cin: implications for o(2) activation.
Biochemistry, 51, 2012
7N40
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BU of 7n40 by Molmil
Crystal structure of LIN9-RbAp48-LIN37, a MuvB subcomplex
分子名称: Histone-binding protein RBBP4, Isoform 2 of Protein lin-9 homolog, Protein lin-37 homolog
著者Asthana, A, Ramanan, P, Tripathi, S.M, Rubin, S.M.
登録日2021-06-02
公開日2022-02-09
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献The MuvB complex binds and stabilizes nucleosomes downstream of the transcription start site of cell-cycle dependent genes.
Nat Commun, 13, 2022
6PXP
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BU of 6pxp by Molmil
Human Casein Kinase 1 delta Site 2 mutant (K171E)
分子名称: Casein kinase I isoform delta, SULFATE ION
著者Yee, L, Philpott, J.M, Tripathi, S.M, Partch, C.L.
登録日2019-07-26
公開日2020-02-12
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Casein kinase 1 dynamics underlie substrate selectivity and the PER2 circadian phosphoswitch.
Elife, 9, 2020
6PXN
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BU of 6pxn by Molmil
Human Casein Kinase 1 delta Tau mutant (R178C)
分子名称: Casein kinase I isoform delta, SULFATE ION
著者Philpott, J.M, Tripathi, S.M, Partch, C.L.
登録日2019-07-26
公開日2020-02-12
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.551 Å)
主引用文献Casein kinase 1 dynamics underlie substrate selectivity and the PER2 circadian phosphoswitch.
Elife, 9, 2020
7MJ9
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BU of 7mj9 by Molmil
HLA-A*02:01 bound to Neuroblastoma Derived mutant IGFBPL1 peptide
分子名称: Beta-2-microglobulin, Insulin-like growth factor-binding protein-like 1 altered peptide, MHC class I antigen
著者Toor, J.S, Tripathi, S.M, Truong, H.V, Yarmarkovich, M, Maris, J.M, Sgourakis, N.G.
登録日2021-04-19
公開日2021-08-18
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Cross-HLA targeting of intracellular oncoproteins with peptide-centric CARs.
Nature, 599, 2021

 

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