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3QUH
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BU of 3quh by Molmil
Structure of heme transport protein IsdH-NEAT3 from S. aureus in complex with Manganese(III)-porphyrin
分子名称: GLYCEROL, Iron-regulated surface determinant protein H, PROTOPORPHYRIN IX CONTAINING MN
著者Moriwaki, Y, Caaveiro, J.M.M, Tsumoto, K.
登録日2011-02-24
公開日2011-03-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Molecular basis of recognition of antibacterial porphyrins by heme-transporter IsdH-NEAT3 of Staphylococcus aureus.
Biochemistry, 50, 2011
4XD9
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BU of 4xd9 by Molmil
Structure of Rpf2-Rrs1 complex involved in ribosome biogenesis
分子名称: Ribosome biogenesis protein (Rrs1), putative (AFU_orthologue AFUA_7G04430), Ribosome biogenesis protein, ...
著者Asano, N, Kato, K, Yao, M.
登録日2014-12-19
公開日2015-06-10
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural and functional analysis of the Rpf2-Rrs1 complex in ribosome biogenesis.
Nucleic Acids Res., 43, 2015
4QCD
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BU of 4qcd by Molmil
Neutron crystal structure of phycocyanobilin:ferredoxin oxidoreductase in complex with biliverdin IXalpha at room temperature.
分子名称: BILIVERDINE IX ALPHA, Phycocyanobilin:ferredoxin oxidoreductase, trideuteriooxidanium
著者Unno, M, Ishikawa-Suto, K, Ishihara, M, Hagiwara, Y, Sugishima, M, Wada, K, Fukuyama, K.
登録日2014-05-10
公開日2015-04-29
最終更新日2024-03-20
実験手法NEUTRON DIFFRACTION (1.932 Å), X-RAY DIFFRACTION
主引用文献Insights into the Proton Transfer Mechanism of a Bilin Reductase PcyA Following Neutron Crystallography.
J. Am. Chem. Soc., 137, 2015
4ZM7
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BU of 4zm7 by Molmil
PcCel45A N105D mutatnt at cryo condition
分子名称: Endoglucanase V-like protein
著者Nakamura, A, Ishida, T, Samejima, M, Igarashi, K.
登録日2015-05-02
公開日2015-09-02
最終更新日2020-01-01
実験手法X-RAY DIFFRACTION (0.701 Å)
主引用文献"Newton's cradle" proton relay with amide-imidic acid tautomerization in inverting cellulase visualized by neutron crystallography.
Sci Adv, 1, 2015
5X6C
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BU of 5x6c by Molmil
Crystal structure of SepRS-SepCysE from Methanocaldococcus jannaschii
分子名称: ADENOSINE-5'-TRIPHOSPHATE, O-phosphoserine--tRNA(Cys) ligase, SULFATE ION, ...
著者Chen, M, Kato, K, Yao, M.
登録日2017-02-21
公開日2017-12-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.101 Å)
主引用文献Structural basis for tRNA-dependent cysteine biosynthesis
Nat Commun, 8, 2017
5X6B
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BU of 5x6b by Molmil
Crystal structure of SepCysE-SepCysS in complex with tRNACys from Methanocaldococcus jannaschii
分子名称: O-phospho-L-seryl-tRNA:Cys-tRNA synthase, Uncharacterized protein MJ1481, tRNACys
著者Chen, M, Kato, K, Yao, M.
登録日2017-02-21
公開日2017-12-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.596 Å)
主引用文献Structural basis for tRNA-dependent cysteine biosynthesis
Nat Commun, 8, 2017
3MBC
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BU of 3mbc by Molmil
Crystal structure of monomeric isocitrate dehydrogenase from Corynebacterium glutamicum in complex with NADP
分子名称: Isocitrate dehydrogenase [NADP], MAGNESIUM ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Sidhu, N.S, Aich, S, Sheldrick, G.M, Delbaere, L.T.J.
登録日2010-03-25
公開日2011-04-06
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of a highly NADP+-specific isocitrate dehydrogenase.
Acta Crystallogr.,Sect.D, 67, 2011
3ST7
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BU of 3st7 by Molmil
Crystal Structure of capsular polysaccharide assembling protein CapF from staphylococcus aureus
分子名称: Capsular polysaccharide synthesis enzyme Cap5F, GLYCEROL, ZINC ION
著者Miyafusa, T, Tanaka, Y, Kuroda, M, Yao, M, Watanabe, M, Ohta, T, Tanaka, I, Caaveiro, J.M.M, Tsumoto, K.
登録日2011-07-09
公開日2012-02-15
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Crystal structure of the enzyme CapF of Staphylococcus aureus reveals a unique architecture composed of two functional domains.
Biochem.J., 443, 2012
1EHG
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BU of 1ehg by Molmil
CRYSTAL STRUCTURES OF CYTOCHROME P450NOR AND ITS MUTANTS (SER286 VAL, THR) IN THE FERRIC RESTING STATE AT CRYOGENIC TEMPERATURE: A COMPARATIVE ANALYSIS WITH MONOOXYGENASE CYTOCHROME P450S
分子名称: CYTOCHROME P450NOR, PROTOPORPHYRIN IX CONTAINING FE
著者Shimizu, H, Park, S.
登録日2000-02-21
公開日2000-08-21
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structures of cytochrome P450nor and its mutants (Ser286-->Val, Thr) in the ferric resting state at cryogenic temperature: a comparative analysis with monooxygenase cytochrome P450s.
J.Inorg.Biochem., 81, 2000
1EHF
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BU of 1ehf by Molmil
CRYSTAL STRUCTURES OF CYTOCHROME P450NOR AND ITS MUTANTS (SER286 VAL, THR) IN THE FERRIC RESTING STATE AT CRYOGENIC TEMPERATURE: A COMPARATIVE ANALYSIS WITH MONOOXYGENASE CYTOCHROME P450S
分子名称: CYTOCHROME P450NOR, PROTOPORPHYRIN IX CONTAINING FE
著者Shimizu, H, Park, S.
登録日2000-02-21
公開日2000-08-21
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structures of cytochrome P450nor and its mutants (Ser286-->Val, Thr) in the ferric resting state at cryogenic temperature: a comparative analysis with monooxygenase cytochrome P450s.
J.Inorg.Biochem., 81, 2000
3VTM
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BU of 3vtm by Molmil
Structure of heme transport protein IsdH-NEAT3 from S. aureus in complex with Indium-porphyrin
分子名称: GLYCEROL, Iron-regulated surface determinant protein H, PROTOPORPHYRIN IX CONTAINING INDIUM
著者Vu, N.T, Caaveiro, J.M.M, Moriwaki, Y, Tsumoto, K.
登録日2012-05-31
公開日2013-05-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Selective binding of antimicrobial porphyrins to the heme-receptor IsdH-NEAT3 of Staphylococcus aureus
Protein Sci., 22, 2013
5H7K
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BU of 5h7k by Molmil
Crystal structure of Elongation factor 2 GDP-form
分子名称: Elongation factor 2, GUANOSINE-5'-DIPHOSPHATE
著者Tanzawa, T, Kato, K, Uchiumi, T, Yao, M.
登録日2016-11-18
公開日2018-02-21
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.599 Å)
主引用文献The C-terminal helix of ribosomal P stalk recognizes a hydrophobic groove of elongation factor 2 in a novel fashion
Nucleic Acids Res., 46, 2018
5H7L
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BU of 5h7l by Molmil
Complex of Elongation factor 2-50S ribosomal protein L12
分子名称: 50S ribosomal protein L12, Elongation factor 2, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER
著者Tanzawa, T, Kato, K, Uchiumi, T, Yao, M.
登録日2016-11-18
公開日2018-02-21
最終更新日2018-05-02
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献The C-terminal helix of ribosomal P stalk recognizes a hydrophobic groove of elongation factor 2 in a novel fashion
Nucleic Acids Res., 46, 2018
5H7J
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BU of 5h7j by Molmil
Crystal structure of Elongation factor 2
分子名称: Elongation factor 2, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER
著者Tanzawa, T, Kato, K, Uchiumi, T, Yao, M.
登録日2016-11-18
公開日2018-02-21
最終更新日2018-05-02
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The C-terminal helix of ribosomal P stalk recognizes a hydrophobic groove of elongation factor 2 in a novel fashion
Nucleic Acids Res., 46, 2018
2ROM
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BU of 2rom by Molmil
CRYSTAL STRUCTURE OF NITRIC REDUCTASE FROM DENITRIFYING FUNGUS FUSARIUM OXYSPORUM COMPLEX WITH CARBON MONOXIDE
分子名称: CARBON MONOXIDE, CYTOCHROME P450, PROTOPORPHYRIN IX CONTAINING FE
著者Park, S.-Y, Nakagawa, A.
登録日1997-03-24
公開日1997-10-15
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of nitric oxide reductase from denitrifying fungus Fusarium oxysporum.
Nat.Struct.Biol., 4, 1997
2Z6F
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BU of 2z6f by Molmil
Crystal structure of NEAT domain from Staphylococcus aureus in complex with heme
分子名称: Iron-regulated surface determinant protein H, PROTOPORPHYRIN IX CONTAINING FE
著者Tanaka, Y, Suenaga, A, Tsumoto, K.
登録日2007-07-31
公開日2008-07-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for multimeric heme complexation through a specific protein-heme interaction: the case of the third neat domain of IsdH from Staphylococcus aureus
J.Biol.Chem., 283, 2008
1V76
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BU of 1v76 by Molmil
Crystal Structure of Archaeal Ribonuclease P Protein Ph1771p from Pyrococcus horikoshii OT3
分子名称: RNase P protein Ph1771p, SULFATE ION
著者Numata, T, Kakuta, Y, Kimura, M.
登録日2003-12-12
公開日2004-10-05
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of archaeal ribonuclease P protein Ph1771p from Pyrococcus horikoshii OT3: an archaeal homolog of eukaryotic ribonuclease P protein Rpp29
Rna, 10, 2004
5AXM
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BU of 5axm by Molmil
Crystal structure of Thg1 like protein (TLP) with tRNA(Phe)
分子名称: MAGNESIUM ION, RNA (75-MER), tRNA(His)-5'-guanylyltransferase (Thg1) like protein
著者Kimura, S, Suzuki, T, Yu, J, Kato, K, Yao, M.
登録日2015-07-31
公開日2016-08-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Template-dependent nucleotide addition in the reverse (3'-5') direction by Thg1-like protein
Sci Adv, 2, 2016
5AXL
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Crystal structure of Thg1 like protein (TLP) with GTP
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, tRNA(His)-5'-guanylyltransferase (Thg1) like protein
著者Kimura, S, Suzuki, T, Yu, J, Kato, K, Yao, M.
登録日2015-07-31
公開日2016-08-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.998 Å)
主引用文献Template-dependent nucleotide addition in the reverse (3'-5') direction by Thg1-like protein
Sci Adv, 2, 2016
5AXK
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BU of 5axk by Molmil
Crystal structure of Thg1 like protein (TLP)
分子名称: GLYCEROL, tRNA(His)-5'-guanylyltransferase (Thg1) like protein
著者Kimura, S, Suzuki, T, Yu, J, Kato, K, Yao, M.
登録日2015-07-31
公開日2016-08-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Template-dependent nucleotide addition in the reverse (3'-5') direction by Thg1-like protein
Sci Adv, 2, 2016
5AXN
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BU of 5axn by Molmil
Crystal structure of Thg1 like protein (TLP) with tRNA(Phe) and GDPNP
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, RNA (75-MER), ...
著者Kimura, S, Suzuki, T, Yu, J, Kato, K, Yao, M.
登録日2015-07-31
公開日2016-08-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.703 Å)
主引用文献Template-dependent nucleotide addition in the reverse (3'-5') direction by Thg1-like protein
Sci Adv, 2, 2016
3VUA
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BU of 3vua by Molmil
Apo IsdH-NEAT3 in space group P3121 at a resolution of 1.85 A
分子名称: ACETATE ION, GLYCEROL, Iron-regulated surface determinant protein H, ...
著者Vu, N.T, Caaveiro, J.M.M, Moriwaki, Y, Tsumoto, K.
登録日2012-06-26
公開日2013-06-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure of heme transport protein IsdH-NEAT3 from S. aureus in complex with Indium-porphyrin
To be Published
3X2L
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X-ray structure of PcCel45A apo form at 95K.
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3-methylpentane-1,5-diol, Endoglucanase V-like protein
著者Nakamura, A, Ishida, T, Ohta, K, Tanaka, H, Inaka, K, Samejima, M, Igarashi, K.
登録日2014-12-22
公開日2015-10-14
最終更新日2019-12-18
実験手法X-RAY DIFFRACTION (0.83 Å)
主引用文献"Newton's cradle" proton relay with amide-imidic acid tautomerization in inverting cellulase visualized by neutron crystallography.
Sci Adv, 1, 2015
2RD3
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BU of 2rd3 by Molmil
Crystal structure of TenA homologue (HP1287) from Helicobacter pylori
分子名称: Transcriptional regulator
著者Barison, N, Cendron, L, Trento, A, Angelini, A, Zanotti, G.
登録日2007-09-21
公開日2008-09-30
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The structural and functional characterization of HP1287 from Helicobacter pylori demonstrates it is a TenA homologue
To be Published
3X2M
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X-ray structure of PcCel45A with cellopentaose at 0.64 angstrom resolution.
分子名称: Endoglucanase V-like protein, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-alpha-D-glucopyranose, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Nakamura, A, Ishida, T, Samejima, M, Igarashi, K.
登録日2014-12-22
公開日2015-10-14
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (0.64 Å)
主引用文献"Newton's cradle" proton relay with amide-imidic acid tautomerization in inverting cellulase visualized by neutron crystallography.
Sci Adv, 1, 2015

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