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3UXW
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BU of 3uxw by Molmil
Crystal Structures of an A-T-hook/DNA complex
分子名称: A-T hook peptide, dodecamer DNA
著者Fonfria-Subiros, E, Acosta-Reyes, F.J, Saperas, N, Pous, J, Subirana, J.A, Campos, J.L.
登録日2011-12-05
公開日2012-05-23
最終更新日2013-03-27
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Crystal structure of a complex of DNA with one AT-hook of HMGA1.
Plos One, 7, 2012
446D
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BU of 446d by Molmil
STRUCTURE OF THE OLIGONUCLEOTIDE D(CGTATATACG) AS A SITE SPECIFIC COMPLEX WITH NICKEL IONS
分子名称: DNA (5'-D(*CP*GP*TP*AP*TP*AP*TP*AP*CP*G)-3'), NICKEL (II) ION
著者Abrescia, N.G.A, Malinina, L, Gonzaga, L.F, Huynh-Dinh, T, Neidle, S, Subirana, J.A.
登録日1999-01-15
公開日1999-03-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure of the oligonucleotide d(CGTATATACG) as a site-specific complex with nickel ions.
Nucleic Acids Res., 27, 1999
463D
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BU of 463d by Molmil
CALCIUM FORM OF D(CGCGAATTCGCG)2
分子名称: CALCIUM ION, DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')
著者Liu, J, Subirana, J.A.
登録日1999-03-29
公開日1999-10-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structure of d(CGCGAATTCGCG) in the presence of Ca(2+) ions.
J.Biol.Chem., 274, 1999
473D
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NI2+/GUANINE INTERACTIONS AND NETROPSIN/GUANINE STACKING IN D(CGTATATACG)2
分子名称: DNA (5'-D(*CP*GP*TP*AP*TP*AP*TP*AP*CP*G)-3'), NETROPSIN, NICKEL (II) ION
著者Abrescia, N.G.A, Malinina, L, Subirana, J.A.
登録日1999-05-18
公開日1999-12-02
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Stacking interaction of guanine with netropsin in the minor groove of d(CGTATATACG)2.
J.Mol.Biol., 294, 1999
426D
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THE STRUCTURE OF MOST STUDIED DNA FRAGMENT CHANGES UNDER THE INFLUENCE OF IONS: A NEW PACKING OF D(CGCGAATTCGCG)
分子名称: 5'-D(CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3', CALCIUM ION
著者Liu, J, Malinina, L, Subirana, J.A.
登録日1998-09-17
公開日1998-11-30
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The structure of the most studied DNA fragment changes under the influence of ions: a new packing of d(CGCGAATTCGCG).
FEBS Lett., 438, 1998
1XCS
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BU of 1xcs by Molmil
structure of oligonucleotide/drug complex
分子名称: 5'-D(*CP*GP*TP*AP*CP*G)-3', 9-[(5-(ACETYLAMINO)-6-{[(1S,4R)-8-AMINO-4-[((2R)-6-AMINO-2-{2-[(1S)-5-AMINO-1-FORMYLPENTYL]HYDRAZINO}HEXANOYL)AMINO]-1-(4-AMINOBUTYL)-2,3-DIOXOOCTYL]AMINO}-6-OXOHEXYL)AMINO]-6-CHLORO-2-METHOXYACRIDINIUM, BARIUM ION, ...
著者Valls, N, Steiner, R.A, Wright, G, Murshudov, G.N, Subirana, J.A.
登録日2004-09-03
公開日2005-07-19
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Variable role of ions in two drug intercalation complexes of DNA
J.Biol.Inorg.Chem., 10, 2005
1XCU
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oligonucleotid/drug complex
分子名称: 1,5-BIS[3-(DIETHYLAMINO)PROPIONAMIDO]ANTHRACENE-9,10-DIONE, 5'-D(*CP*GP*TP*AP*CP*G)-3', BARIUM ION, ...
著者Valls, N, Steiner, R.A, Wright, G, Murshudov, G.N, Subirana, J.A.
登録日2004-09-03
公開日2005-07-19
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Variable role of ions in two drug intercalation complexes of DNA
J.Biol.Inorg.Chem., 10, 2005
368D
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STRUCTURAL VARIABILITY OF A-DNA IN CRYSTALS OF THE OCTAMER D(PCPCPCPGPCPGPGPG)
分子名称: DNA (5'-D(P*CP*CP*CP*GP*CP*GP*GP*G)-3')
著者Fernandez, L.G, Subirana, J.A, Verdaguer, N, Pyshnyi, D, Campos, L, Malinina, L.
登録日1997-12-19
公開日1998-07-15
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural variability of A-DNA in crystals of the octamer d(pCpCpCpGpCpGpGpG)
J.Biomol.Struct.Dyn., 15, 1997
391D
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STRUCTURAL VARIABILITY AND NEW INTERMOLECULAR INTERACTIONS OF Z-DNA IN CRYSTALS OF D(PCPGPCPGPCPG)
分子名称: DNA (5'-D(P*CP*GP*CP*GP*CP*G)-3')
著者Malinina, L, Tereshko, V, Ivanova, E, Subirana, J.A, Zarytova, V, Nekrasov, Y.
登録日1998-04-20
公開日1998-05-05
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structural variability and new intermolecular interactions of Z-DNA in crystals of d(pCpGpCpGpCpG).
Biophys.J., 74, 1998
371D
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STRUCTURAL VARIABILITY OF A-DNA IN CRYSTALS OF THE OCTAMER D(PCPCPCPGPCPGPGPG)
分子名称: DNA (5'-D(P*CP*CP*CP*GP*CP*GP*GP*G)-3')
著者Fernandez, L.G, Subirana, J.A, Verdaguer, N, Pyshnyi, D, Campos, L.
登録日1997-12-19
公開日1998-07-15
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural variability of A-DNA in crystals of the octamer d(pCpCpCpGpCpGpGpG)
J.Biomol.Struct.Dyn., 15, 1997
399D
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BU of 399d by Molmil
STRUCTURE OF D(CGCCCGCGGGCG)
分子名称: DNA (5'-D(*CP*GP*CP*CP*CP*GP*CP*GP*GP*GP*CP*G)-3')
著者Malinina, L, Fernandez, L.G, Subirana, J.A.
登録日1998-05-11
公開日1999-01-18
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of the d(CGCCCGCGGGCG) dodecamer: a kinked A-DNA molecule showing some B-DNA features.
J.Mol.Biol., 285, 1999
370D
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STRUCTURAL VARIABILITY OF A-DNA IN CRYSTALS OF THE OCTAMER D(PCPCPCPGPCPGPGPG)
分子名称: DNA (5'-D(P*CP*CP*CP*GP*CP*GP*GP*G)-3'), MAGNESIUM ION
著者Fernandez, L.G, Subirana, J.A, Verdaguer, N, Pyshnyi, D, Campos, L.
登録日1997-12-19
公開日1998-07-15
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Structural variability of A-DNA in crystals of the octamer d(pCpCpCpGpCpGpGpG)
J.Biomol.Struct.Dyn., 15, 1997
392D
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STRUCTURAL VARIABILITY AND NEW INTERMOLECULAR INTERACTIONS OF Z-DNA IN CRYSTALS OF D(PCPGPCPGPCPG)
分子名称: DNA (5'-D(P*CP*GP*CP*GP*CP*G)-3'), MAGNESIUM ION
著者Malinina, L, Tereshko, V, Ivanova, E, Subirana, J.A, Zarytova, V, Nekrasov, Y.
登録日1998-04-20
公開日1998-05-05
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural variability and new intermolecular interactions of Z-DNA in crystals of d(pCpGpCpGpCpG).
Biophys.J., 74, 1998
369D
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BU of 369d by Molmil
STRUCTURAL VARIABILITY OF A-DNA IN CRYSTALS OF THE OCTAMER D(PCPCPCPGPCPGPGPG)
分子名称: DNA (5'-D(P*CP*CP*CP*GP*CP*GP*GP*G)-3')
著者Fernandez, L.G, Subirana, J.A, Verdaguer, N, Pyshnyi, D, Campos, L.
登録日1997-12-19
公開日1998-07-15
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural variability of A-DNA in crystals of the octamer d(pCpCpCpGpCpGpGpG)
J.Biomol.Struct.Dyn., 15, 1997
390D
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BU of 390d by Molmil
STRUCTURAL VARIABILITY AND NEW INTERMOLECULAR INTERACTIONS OF Z-DNA IN CRYSTALS OF D(PCPGPCPGPCPG)
分子名称: DNA (5'-D(P*CP*GP*CP*GP*CP*G)-3')
著者Malinina, L, Tereshko, V, Ivanova, E, Subirana, J.A, Zarytova, V, Nekrasov, Y.
登録日1998-04-20
公開日1998-05-05
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural variability and new intermolecular interactions of Z-DNA in crystals of d(pCpGpCpGpCpG).
Biophys.J., 74, 1998
372D
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BU of 372d by Molmil
STRUCTURAL VARIABILITY OF A-DNA IN CRYSTALS OF THE OCTAMER D(PCPCPCPGPCPGPGPG)
分子名称: DNA (5'-D(P*CP*CP*CP*GP*CP*GP*GP*G)-3')
著者Fernandez, L.G, Subirana, J.A, Verdaguer, N, Pyshnyi, D, Campos, L.
登録日1997-12-19
公開日1998-07-15
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural variability of A-DNA in crystals of the octamer d(pCpCpCpGpCpGpGpG)
J.Biomol.Struct.Dyn., 15, 1997
2A2T
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crystal structure of d(AAATATTT)
分子名称: 5'-D(*AP*AP*AP*TP*AP*TP*TP*T)-3', CACODYLATE ION, MANGANESE (II) ION
著者Valls, N, Richter, M, Subirana, J.A.
登録日2005-06-23
公開日2005-11-29
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structure of a DNA duplex with all-AT base pairs.
Acta Crystallogr.,Sect.D, 61, 2005
2AF1
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Structure of the DNA coiled-coil formed by d(CGATATATATAT)
分子名称: 5'-D(*CP*GP*AP*TP*AP*TP*AP*TP*AP*TP*AP*T)-3'
著者De Luchi, D, Tereshko, V, Gouyette, C, Subirana, J.A.
登録日2005-07-25
公開日2006-03-07
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structure of the DNA Coiled Coil Formed by d(CGATATATATAT)
Chembiochem, 7, 2006
2F8W
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Crystal structure of d(CACGTG)2
分子名称: 1,3-DIAMINOPROPANE, 5'-D(*CP*AP*CP*GP*TP*G)-3', SPERMINE
著者Narayana, N, Shamala, N, Ganesh, K.N, Viswamitra, M.A.
登録日2005-12-04
公開日2006-01-31
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Interaction between the Z-Type DNA Duplex and 1,3-Propanediamine: Crystal Structure of d(CACGTG)2 at 1.2 A Resolution
Biochemistry, 45, 2006
3BSE
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BU of 3bse by Molmil
Crystal structure analysis of a 16-base-pair B-DNA
分子名称: CALCIUM ION, DNA (5'-D(*DA*DCP*DAP*DCP*DTP*DAP*DCP*DAP*DAP*DTP*DGP*DTP*DTP*DGP*DCP*DAP*DAP*DT)-3'), DNA (5'-D(*DG*DTP*DAP*DTP*DTP*DGP*DCP*DAP*DAP*DCP*DAP*DTP*DTP*DGP*DTP*DAP*DGP*DT)-3')
著者Narayana, N.
登録日2007-12-23
公開日2008-12-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystallographic Analysis of a Sex-Specific Enhancer Element: Sequence-Dependent DNA Structure, Hydration, and Dynamics
J.Mol.Biol., 385, 2009
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