Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3OSK
DownloadVisualize
BU of 3osk by Molmil
Crystal structure of human CTLA-4 apo homodimer
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Cytotoxic T-lymphocyte protein 4, GLYCEROL
Authors:Yu, C, Sonnen, A.F.-P, Ikemizu, S, Stuart, D.I, Gilbert, R.J.C, Davis, S.J.
Deposit date:2010-09-09
Release date:2010-12-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Rigid-body ligand recognition drives cytotoxic T-lymphocyte antigen 4 (CTLA-4) receptor triggering
J.Biol.Chem., 286, 2011
3JV9
DownloadVisualize
BU of 3jv9 by Molmil
The structure of a reduced form of OxyR from N. meningitidis
Descriptor: CHLORIDE ION, Transcriptional regulator, LysR family
Authors:Sainsbury, S, Ren, J, Stuart, D.I, Owens, R.J, Oxford Protein Production Facility (OPPF)
Deposit date:2009-09-16
Release date:2010-06-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:The structure of a reduced form of OxyR from Neisseria meningitidis
Bmc Struct.Biol., 10, 2010
3JB4
DownloadVisualize
BU of 3jb4 by Molmil
Structure of Ljungan virus: insight into picornavirus packaging
Descriptor: VP0, VP1, VP3
Authors:Zhu, L, Wang, X.X, Ren, J.S, Porta, C, Wenham, H, Ekstrom, J.-O, Panjwani, A, Knowles, N.J, Kotecha, A, Siebert, A, Lindberg, M, Fry, E.E, Rao, Z.H, Tuthill, T.J, Stuart, D.I.
Deposit date:2015-07-21
Release date:2015-10-21
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure of Ljungan virus provides insight into genome packaging of this picornavirus.
Nat Commun, 6, 2015
3KYJ
DownloadVisualize
BU of 3kyj by Molmil
Crystal structure of the P1 domain of CheA3 in complex with CheY6 from R. sphaeroides
Descriptor: CheY6 protein, Putative histidine protein kinase, SODIUM ION
Authors:Bell, C.H, Porter, S.L, Armitage, J.P, Stuart, D.I.
Deposit date:2009-12-06
Release date:2010-02-16
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Using structural information to change the phosphotransfer specificity of a two-component chemotaxis signalling complex
Plos Biol., 8, 2010
3KYI
DownloadVisualize
BU of 3kyi by Molmil
Crystal structure of the phosphorylated P1 domain of CheA3 in complex with CheY6 from R. sphaeroides
Descriptor: CheY6 protein, Putative histidine protein kinase
Authors:Bell, C.H, Porter, S.L, Armitage, J.P, Stuart, D.I.
Deposit date:2009-12-06
Release date:2010-02-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Using structural information to change the phosphotransfer specificity of a two-component chemotaxis signalling complex
Plos Biol., 8, 2010
3ME4
DownloadVisualize
BU of 3me4 by Molmil
Crystal structure of mouse RANK
Descriptor: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
Authors:Walter, S.W, Liu, C, Zhu, X, Wu, Y, Owens, R.J, Stuart, D.I, Gao, B, Ren, J.
Deposit date:2010-03-31
Release date:2010-06-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structural and Functional Insights of RANKL-RANK Interaction and Signaling.
J.Immunol., 2010
3ME2
DownloadVisualize
BU of 3me2 by Molmil
Crystal structure of mouse RANKL-RANK complex
Descriptor: CHLORIDE ION, SODIUM ION, Tumor necrosis factor ligand superfamily member 11, ...
Authors:Walter, S.W, Liu, C.Z, Zhu, X.K, Wu, Y, Owens, R.J, Stuart, D.I, Gao, B, Ren, J.
Deposit date:2010-03-31
Release date:2010-06-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural and Functional Insights of RANKL-RANK Interaction and Signaling.
J.Immunol., 2010
7ZFB
DownloadVisualize
BU of 7zfb by Molmil
SARS-CoV-2 Omicron RBD in complex with nanobody C1, Omi-18 and Omi-31 Fabs
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Nanobody C1, Omi-18 heavy chain, ...
Authors:Zhou, D, Huo, J, Ren, J, Stuart, D.I.
Deposit date:2022-04-01
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.08 Å)
Cite:Potent cross-reactive antibodies following Omicron breakthrough in vaccinees.
Cell, 185, 2022
7ZF3
DownloadVisualize
BU of 7zf3 by Molmil
SARS-CoV-2 Omicron RBD in complex with Omi-3 and EY6A Fabs
Descriptor: EY6A heavy chain, EY6A light chain, GLYCEROL, ...
Authors:Zhou, D, Huo, J, Ren, J, Stuart, D.I.
Deposit date:2022-04-01
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Potent cross-reactive antibodies following Omicron breakthrough in vaccinees.
Cell, 185, 2022
7ZF8
DownloadVisualize
BU of 7zf8 by Molmil
SARS-CoV-2 Omicron BA.2 RBD in complex with COVOX-150 Fab
Descriptor: COVOX-150 heavy chain, COVOX-150 light chain, Spike protein S1
Authors:Zhou, D, Huo, J, Ren, J, Stuart, D.I.
Deposit date:2022-04-01
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Potent cross-reactive antibodies following Omicron breakthrough in vaccinees.
Cell, 185, 2022
7ZF5
DownloadVisualize
BU of 7zf5 by Molmil
SARS-CoV-2 Omicron RBD in complex with Omi-12 and Beta-54 Fabs
Descriptor: Beta-54 heavy chain, Beta-54 light chain, Omi-12 heavy chain, ...
Authors:Zhou, D, Huo, J, Ren, J, Stuart, D.I.
Deposit date:2022-04-01
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (5.32 Å)
Cite:Potent cross-reactive antibodies following Omicron breakthrough in vaccinees.
Cell, 185, 2022
7ZFE
DownloadVisualize
BU of 7zfe by Molmil
SARS-CoV-2 Omicron RBD in complex with Omi-32 Fab and nanobody C1
Descriptor: Nanobody C1, Omi-32 heavy chain, Omi-32 light chain, ...
Authors:Zhou, D, Huo, J, Ren, J, Stuart, D.I.
Deposit date:2022-04-01
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Potent cross-reactive antibodies following Omicron breakthrough in vaccinees.
Cell, 185, 2022
7ZF7
DownloadVisualize
BU of 7zf7 by Molmil
SARS-CoV-2 Omicron BA.2 RBD in complex with ACE2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, Spike protein S1, ...
Authors:Zhou, D, Huo, J, Ren, J, Stuart, D.I.
Deposit date:2022-04-01
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.46 Å)
Cite:Potent cross-reactive antibodies following Omicron breakthrough in vaccinees.
Cell, 185, 2022
7ZFF
DownloadVisualize
BU of 7zff by Molmil
Omi-42 Fab
Descriptor: GLYCEROL, Omi-42 Heavy chain, Omi-42 light chain
Authors:Zhou, D, Huo, J, Ren, J, Stuart, D.I.
Deposit date:2022-04-01
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Potent cross-reactive antibodies following Omicron breakthrough in vaccinees.
Cell, 185, 2022
7ZFD
DownloadVisualize
BU of 7zfd by Molmil
SARS-CoV-2 Omicron RBD in complex with Omi-25 Fab
Descriptor: Omi-25 heavy chain, Omi-25 light chain, Spike protein S1
Authors:Zhou, D, Huo, J, Ren, J, Stuart, D.I.
Deposit date:2022-04-01
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.39 Å)
Cite:Potent cross-reactive antibodies following Omicron breakthrough in vaccinees.
Cell, 185, 2022
7ZF6
DownloadVisualize
BU of 7zf6 by Molmil
Omi-12 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CITRIC ACID, GLYCEROL, ...
Authors:Zhou, D, Huo, J, Ren, J, Stuart, D.I.
Deposit date:2022-04-01
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Potent cross-reactive antibodies following Omicron breakthrough in vaccinees.
Cell, 185, 2022
7ZFC
DownloadVisualize
BU of 7zfc by Molmil
SARS-CoV-2 Beta RBD in complex with nanobody C1, Omi-18 and Omi-31 Fabs
Descriptor: Nanobody C1, Omi-18 heavy chain, Omi-18 light chain, ...
Authors:Zhou, D, Huo, J, Ren, J, Stuart, D.I.
Deposit date:2022-04-01
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.24 Å)
Cite:Potent cross-reactive antibodies following Omicron breakthrough in vaccinees.
Cell, 185, 2022
7ZF9
DownloadVisualize
BU of 7zf9 by Molmil
SARS-CoV-2 Omicron BA.2 RBD in complex with COVOX-150 Fab (P21)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, COVOX-150 heavy chain, COVOX-150 light chain, ...
Authors:Zhou, D, Huo, J, Ren, J, Stuart, D.I.
Deposit date:2022-04-01
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Potent cross-reactive antibodies following Omicron breakthrough in vaccinees.
Cell, 185, 2022
7ZF4
DownloadVisualize
BU of 7zf4 by Molmil
SARS-CoV-2 Omicron RBD in complex with Omi-9 Fab and nanobody F2
Descriptor: Nanobody F2, Omi-9 heavy chain, Omi-9 light chain, ...
Authors:Zhou, D, Huo, J, Ren, J, Stuart, D.I.
Deposit date:2022-04-01
Release date:2022-06-08
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (4.18 Å)
Cite:Potent cross-reactive antibodies following Omicron breakthrough in vaccinees.
Cell, 185, 2022
7ZFA
DownloadVisualize
BU of 7zfa by Molmil
SARS-CoV-2 Omicron RBD in complex with Omi-6 and COVOX-150 Fabs
Descriptor: COVOX-150 heavy chain, COVOX-150 light chain, Omi-6 heavy chain, ...
Authors:Zhou, D, Huo, J, Ren, J, Stuart, D.I.
Deposit date:2022-04-01
Release date:2022-06-29
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (4.24 Å)
Cite:Potent cross-reactive antibodies following Omicron breakthrough in vaccinees.
Cell, 185, 2022
7OOK
DownloadVisualize
BU of 7ook by Molmil
Bacteriophage PRD1 Major Capsid Protein P3 in complex with CPZ
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3-(2-chloro-10H-phenothiazin-10-yl)-N,N-dimethylpropan-1-amine, CHLORIDE ION, ...
Authors:Duyvesteyn, H.M.E, Peccati, F, Martinez-Castillo, A, Jimenez-Oses, G, Oksanen, H.M, Stuart, D.I, Abrescia, N.G.A.
Deposit date:2021-05-27
Release date:2022-06-08
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Bacteriophage PRD1 as a nanoscaffold for drug loading
Nanoscale, 13, 2021
5OAC
DownloadVisualize
BU of 5oac by Molmil
FLiP major capsid protein
Descriptor: Major capsid protein
Authors:De Colibus, L, Stuart, D.I, Huiskonen, J.T.
Deposit date:2017-06-21
Release date:2017-07-26
Last modified:2019-11-13
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Virus found in a boreal lake links ssDNA and dsDNA viruses.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5O5B
DownloadVisualize
BU of 5o5b by Molmil
Poliovirus type 3 (strain Saukett) stabilized virus-like particle
Descriptor: Capsid proteins, VP1, VP2, ...
Authors:Bahar, M.W, Kotecha, A, Fry, E.E, Stuart, D.I.
Deposit date:2017-06-01
Release date:2017-07-12
Last modified:2022-09-21
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Plant-made polio type 3 stabilized VLPs-a candidate synthetic polio vaccine.
Nat Commun, 8, 2017
5O5P
DownloadVisualize
BU of 5o5p by Molmil
Poliovirus type 3 (strain Saukett) stabilized virus-like particle in complex with the pocket factor compound GPP3
Descriptor: 1-[5-[4-(ethoxyiminomethyl)phenoxy]-3-methyl-pentyl]-3-pyridin-4-yl-imidazol-2-one, Capsid proteins, VP4, ...
Authors:Bahar, M.W, Kotecha, A, Fry, E.E, Stuart, D.I.
Deposit date:2017-06-02
Release date:2017-07-12
Last modified:2022-09-21
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Plant-made polio type 3 stabilized VLPs-a candidate synthetic polio vaccine.
Nat Commun, 8, 2017
5OW6
DownloadVisualize
BU of 5ow6 by Molmil
CryoEM structure of recombinant CMV particles with Tetanus-epitope
Descriptor: Capsid protein, VP2, VP3, ...
Authors:Kotecha, A, Stuart, D.I, Backmann, M.
Deposit date:2017-08-30
Release date:2017-09-13
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Incorporation of tetanus-epitope into virus-like particles achieves vaccine responses even in older recipients in models of psoriasis, Alzheimer's and cat allergy.
NPJ Vaccines, 2, 2017

219869

数据于2024-05-15公开中

PDB statisticsPDBj update infoContact PDBjnumon