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7F8K
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BU of 7f8k by Molmil
Room temperature structure of bacterial copper amine oxidase determined by serial femtosecond crystallography
Descriptor: COPPER (II) ION, Phenylethylamine oxidase
Authors:Murakawa, T, Okajima, T.
Deposit date:2021-07-02
Release date:2021-09-08
Last modified:2021-10-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Microcrystal preparation for serial femtosecond X-ray crystallography of bacterial copper amine oxidase
Acta Crystallogr.,Sect.F, 77, 2021
7CTQ
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BU of 7ctq by Molmil
Peptidyl tryptophan dihydroxylase QhpG essential for tryptophylquinone cofactor biogenesis
Descriptor: (2~{R},3~{R},4~{S},5~{S},6~{R})-2-[(2~{R},3~{S},4~{R},5~{R},6~{R})-6-(cyclohexylmethoxy)-2-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol, FLAVIN-ADENINE DINUCLEOTIDE, HEXANE-1,6-DIOL, ...
Authors:Oozeki, T, Nakai, T, Okajima, T.
Deposit date:2020-08-20
Release date:2021-02-17
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.978 Å)
Cite:Functional and structural characterization of a flavoprotein monooxygenase essential for biogenesis of tryptophylquinone cofactor.
Nat Commun, 12, 2021
6L9C
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BU of 6l9c by Molmil
Neutron structure of copper amine oxidase from Arthrobacter glibiformis at pD 7.4
Descriptor: COPPER (II) ION, Phenylethylamine oxidase, SODIUM ION
Authors:Murakawa, T, Kurihara, K, Shoji, M, Shibazaki, C, Sunami, T, Tamada, T, Yano, N, Yamada, T, Kusaka, K, Suzuki, M, Shigeta, Y, Kuroki, R, Hayashi, H, Yano, Y, Tanizawa, K, Adachi, M, Okajima, T.
Deposit date:2019-11-08
Release date:2020-04-29
Last modified:2023-11-22
Method:NEUTRON DIFFRACTION (1.14 Å), X-RAY DIFFRACTION
Cite:Neutron crystallography of copper amine oxidase reveals keto/enolate interconversion of the quinone cofactor and unusual proton sharing.
Proc.Natl.Acad.Sci.USA, 117, 2020
7YNH
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BU of 7ynh by Molmil
Catalytic intermediate of copper amine oxidase determined by serial femtosecond X-ray crystallography using a single-flow liquid jet system
Descriptor: COPPER (II) ION, PHENYLACETALDEHYDE, Phenylethylamine oxidase, ...
Authors:Murakawa, T, Okajima, T.
Deposit date:2022-07-31
Release date:2022-11-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Serial femtosecond X-ray crystallography of an anaerobically formed catalytic intermediate of copper amine oxidase.
Acta Crystallogr D Struct Biol, 78, 2022
3AMO
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BU of 3amo by Molmil
Time-resolved X-ray Crystal Structure Analysis of Enzymatic Reaction of Copper Amine Oxidase from Arthrobacter globiformis
Descriptor: COPPER (II) ION, GLYCEROL, Phenylethylamine oxidase, ...
Authors:Kataoka, M, Oya, H, Tominaga, A, Otsu, M, Okajima, T, Tanizawa, K, Yamaguchi, H.
Deposit date:2010-08-20
Release date:2011-11-23
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Detection of the reaction intermediates catalyzed by a copper amine oxidase.
J.SYNCHROTRON RADIAT., 18, 2011
7WNO
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BU of 7wno by Molmil
Crystallographic structure of copper amine oxidase from Arthrobacter glibiformis at pD 7.4 determined by only neutron diffraction data.
Descriptor: COPPER (II) ION, Phenylethylamine oxidase
Authors:Murakawa, T, Okajima, T.
Deposit date:2022-01-19
Release date:2022-04-20
Last modified:2022-05-25
Method:NEUTRON DIFFRACTION (1.72 Å)
Cite:Re-evaluation of protein neutron crystallography with and without X-ray/neutron joint refinement.
Iucrj, 9, 2022
7WNP
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BU of 7wnp by Molmil
Crystallographic structure of copper amine oxidase from Arthrobacter glibiformis at pD 7.4 determined by both X-ray and neutron diffraction data at 1.72 angstrom resolution.
Descriptor: COPPER (II) ION, Phenylethylamine oxidase, SODIUM ION
Authors:Murakawa, T, Okajima, T.
Deposit date:2022-01-19
Release date:2022-04-20
Last modified:2022-05-25
Method:NEUTRON DIFFRACTION (1.72 Å), X-RAY DIFFRACTION
Cite:Re-evaluation of protein neutron crystallography with and without X-ray/neutron joint refinement.
Iucrj, 9, 2022
7WIS
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BU of 7wis by Molmil
Catalytic intermediate structure of N381A mutant of copper amine oxidase from Arthrobacter globiformis
Descriptor: COPPER (II) ION, GLYCEROL, PHENYLACETALDEHYDE, ...
Authors:Murakawa, T, Okajima, T.
Deposit date:2022-01-04
Release date:2022-11-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Molecular mechanism of a large conformational change of the quinone cofactor in the semiquinone intermediate of bacterial copper amine oxidase.
Chem Sci, 13, 2022
7WIR
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BU of 7wir by Molmil
Holo form of N381A mutant of copper amine oxidase from Arthrobacter globiformis
Descriptor: COPPER (II) ION, GLYCEROL, Phenylethylamine oxidase
Authors:Murakawa, T, Okajima, T.
Deposit date:2022-01-04
Release date:2022-11-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Molecular mechanism of a large conformational change of the quinone cofactor in the semiquinone intermediate of bacterial copper amine oxidase.
Chem Sci, 13, 2022
2ZL8
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BU of 2zl8 by Molmil
Crystal structure of copper amine oxidase from Arthrobacter globiformis: Substrate Schiff-base intermediate formed with ethylamine
Descriptor: COPPER (II) ION, Phenylethylamine oxidase
Authors:Murakawa, T, Okajima, T.
Deposit date:2008-04-03
Release date:2008-08-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Further insight into the mechanism of stereoselective proton abstraction by bacterial copper amine oxidase
Biochemistry, 47, 2008
2YX9
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BU of 2yx9 by Molmil
Crystal structure of D298K copper amine oxidase from Arthrobacter globiformis
Descriptor: COPPER (II) ION, Phenylethylamine oxidase
Authors:Murakawa, T, Okajima, T, Yamaguchi, H, Tanizawa, K.
Deposit date:2007-04-25
Release date:2008-04-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Trapping of a dopaquinone intermediate in the TPQ cofactor biogenesis in a copper-containing amine oxidase from Arthrobacter globiformis.
J.Am.Chem.Soc., 129, 2007
1JJU
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BU of 1jju by Molmil
Structure of a Quinohemoprotein Amine Dehydrogenase with a Unique Redox Cofactor and Highly Unusual Crosslinking
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, QUINOHEMOPROTEIN AMINE DEHYDROGENASE, SODIUM ION, ...
Authors:Datta, S, Mori, Y, Takagi, K, Kawaguchi, K, Chen, Z.-W, Kano, K, Ikeda, T, Okajima, T, Kuroda, S, Tanizawa, K, Mathews, F.S.
Deposit date:2001-07-09
Release date:2001-12-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure of a quinohemoprotein amine dehydrogenase with an uncommon redox cofactor and highly unusual crosslinking.
Proc.Natl.Acad.Sci.USA, 98, 2001
2ZWM
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BU of 2zwm by Molmil
Crystal structure of YycF receiver domain from Bacillus subtilis
Descriptor: SULFATE ION, Transcriptional regulatory protein yycF
Authors:Doi, A, Okajima, T, Utsumi, R.
Deposit date:2008-12-16
Release date:2009-07-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Novel Antibiotics Target Protein of Gram-positive Pathogens: X-ray Crystal Structures and Search of Potential Drug-Binding sites
To be Published
2D1W
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BU of 2d1w by Molmil
Substrate Schiff-Base intermediate with tyramine in copper amine oxidase from Arthrobacter globiformis
Descriptor: COPPER (II) ION, Phenylethylamine oxidase
Authors:Murakawa, T, Okajima, T, Kuroda, S, Nakamoto, T, Taki, M, Yamamoto, Y, Hayashi, H, Tanizawa, K.
Deposit date:2005-09-01
Release date:2006-05-02
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Quantum mechanical hydrogen tunneling in bacterial copper amine oxidase reaction
Biochem.Biophys.Res.Commun., 342, 2006
1UI7
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BU of 1ui7 by Molmil
Site-directed mutagenesis of His433 involved in binding of copper ion in Arthrobacter globiformis amine oxidase
Descriptor: COPPER (II) ION, Phenylethylamine oxidase
Authors:Matsunami, H, Okajima, T, Hirota, S, Yamaguchi, H, Hori, H, Kuroda, S, Tanizawa, K.
Deposit date:2003-07-15
Release date:2004-04-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Chemical rescue of a site-specific mutant of bacterial copper amine oxidase for generation of the topa quinone cofactor
Biochemistry, 43, 2004
1UI8
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BU of 1ui8 by Molmil
Site-directed mutagenesis of His592 involved in binding of copper ion in Arthrobacter globiformis amine oxidase
Descriptor: COPPER (II) ION, Phenylethylamine oxidase
Authors:Matsunami, H, Okajima, T, Hirota, S, Yamaguchi, H, Hori, H, Kuroda, S, Tanizawa, K.
Deposit date:2003-07-15
Release date:2004-04-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Chemical rescue of a site-specific mutant of bacterial copper amine oxidase for generation of the topa quinone cofactor
Biochemistry, 43, 2004
3WA3
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BU of 3wa3 by Molmil
Crystal structure of copper amine oxidase from arthrobacter globiformis in N2 condition
Descriptor: 1,2-ETHANEDIOL, COPPER (II) ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Murakawa, T, Hayashi, H, Sunami, T, Kurihara, K, Tamada, T, Kuroki, R, Suzuki, M, Tanizawa, K, Okajima, T.
Deposit date:2013-04-22
Release date:2013-09-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:High-resolution crystal structure of copper amine oxidase from Arthrobacter globiformis: assignment of bound diatomic molecules as O2
Acta Crystallogr.,Sect.D, 69, 2013
3WA2
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BU of 3wa2 by Molmil
High resolution crystal structure of copper amine oxidase from arthrobacter globiformis
Descriptor: 1,2-ETHANEDIOL, COPPER (II) ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Murakawa, T, Hayashi, H, Sunami, T, Kurihara, K, Tamada, T, Kuroki, R, Suzuki, M, Tanizawa, K, Okajima, T.
Deposit date:2013-04-22
Release date:2013-09-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:High-resolution crystal structure of copper amine oxidase from Arthrobacter globiformis: assignment of bound diatomic molecules as O2
Acta Crystallogr.,Sect.D, 69, 2013
2CWV
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BU of 2cwv by Molmil
Product schiff-base intermediate of copper amine oxidase from arthrobacter globiformis
Descriptor: COPPER (II) ION, Phenylethylamine oxidase
Authors:Chiu, Y.C, Okajima, T, Murakawa, T, Uchida, M, Taki, M, Hirota, S, Kim, M, Yamaguchi, H, Kawano, Y, Kamiya, N, Kuroda, S, Hayashi, H, Yamamoto, Y, Tanizawa, K.
Deposit date:2005-06-26
Release date:2006-05-02
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Kinetic and Structural Studies on the Catalytic Role of the Aspartic Acid Residue Conserved in Copper Amine Oxidase(,)
Biochemistry, 45, 2006
2CWU
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BU of 2cwu by Molmil
Substrate schiff-base intermediate of copper amine oxidase from arthrobacter globiformis
Descriptor: COPPER (II) ION, Phenylethylamine oxidase
Authors:Chiu, Y.C, Okajima, T, Murakawa, T, Uchida, M, Taki, M, Hirota, S, Kim, M, Yamaguchi, H, Kawano, Y, Kamiya, N, Kuroda, S, Hayashi, H, Yamamoto, Y, Tanizawa, K.
Deposit date:2005-06-26
Release date:2006-05-02
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Kinetic and Structural Studies on the Catalytic Role of the Aspartic Acid Residue Conserved in Copper Amine Oxidase(,)
Biochemistry, 45, 2006
2CWT
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BU of 2cwt by Molmil
Catalytic base deletion in copper amine oxidase from arthrobacter globiformis
Descriptor: COPPER (II) ION, Phenylethylamine oxidase
Authors:Chiu, Y.C, Okajima, T, Murakawa, T, Uchida, M, Taki, M, Hirota, S, Kim, M, Yamaguchi, H, Kawano, Y, Kamiya, N, Kuroda, S, Hayashi, H, Yamamoto, Y, Tanizawa, K.
Deposit date:2005-06-26
Release date:2006-05-02
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Kinetic and Structural Studies on the Catalytic Role of the Aspartic Acid Residue Conserved in Copper Amine Oxidase(,)
Biochemistry, 45, 2006
2E2V
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BU of 2e2v by Molmil
Substrate Schiff-base analogue of copper amine oxidase from Arthrobacter globiformis formed with benzylhydrazine
Descriptor: COPPER (II) ION, Phenylethylamine oxidase
Authors:Murakawa, T, Okajima, T, Taki, M, Yamamoto, Y, Kuroda, S, Hayashi, H, Tanizawa, K.
Deposit date:2006-11-17
Release date:2007-11-20
Last modified:2013-04-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Catalytic Regulation Conducted by the Substrate Schiff Base and Conserved Aspartic Acid Residue in Bacterial Copper Amine Oxidase Reaction
To be Published
2E2T
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BU of 2e2t by Molmil
Substrate Schiff-base analogue of copper amine oxidase from Arthrobacter globiformis formed with phenylhydrazine
Descriptor: COPPER (II) ION, Phenylethylamine oxidase
Authors:Murakawa, T, Okajima, T, Taki, M, Yamamoto, Y, Kuroda, S, Hayashi, H, Tanizawa, K.
Deposit date:2006-11-17
Release date:2007-11-20
Last modified:2013-04-24
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Catalytic Regulation Conducted by the Substrate Schiff Base and Conserved Aspartic Acid Residue in Bacterial Copper Amine Oxidase Reaction
To be Published
2E2U
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BU of 2e2u by Molmil
Substrate Schiff-base analogue of copper amine oxidase from Arthrobacter globiformis formed with 4-hydroxybenzylhydrazine
Descriptor: COPPER (II) ION, Phenylethylamine oxidase
Authors:Murakawa, T, Okajima, T, Taki, M, Yamamoto, Y, Hayashi, H, Tanizawa, K.
Deposit date:2006-11-17
Release date:2007-11-20
Last modified:2013-04-24
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Catalytic Regulation Conducted by the Substrate Schiff Base and Conserved Aspartic Acid Residue in Bacterial Copper Amine Oxidase Reaction
To be Published
1IU7
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BU of 1iu7 by Molmil
HOLO FORM OF COPPER-CONTAINING AMINE OXIDASE FROM ARTHROBACTER GLOBIFORMIS
Descriptor: AMINE OXIDASE, COPPER (II) ION
Authors:Kishishita, S, Okajima, T, Kim, M, Yamaguchi, H, Hirota, S, Suzuki, S, Kuroda, S, Tanizawa, K, Mure, M.
Deposit date:2002-02-28
Release date:2003-02-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Role of Copper Ion in Bacterial Copper Amine Oxidase: Spectroscopic and Crystallographic Studies of Metal-Substituted Enzymes
J.AM.CHEM.SOC., 125, 2003

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