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2D4Y
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BU of 2d4y by Molmil
Crystal structure of a 49K fragment of HAP1 (FlgK)
Descriptor: Flagellar hook-associated protein 1
Authors:Imada, K, Matsunami, H, Samatey, A.F, Nagashima, S, Namba, K.
Deposit date:2005-10-25
Release date:2006-11-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of the bacterial flagellar hook-filament junction
To be Published
2D4X
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BU of 2d4x by Molmil
Crystal structure of a 26K fragment of HAP3 (FlgL)
Descriptor: Flagellar hook-associated protein 3
Authors:Imada, K, Matsunami, H, Samatey, A.F, Nagashima, S, Namba, K.
Deposit date:2005-10-25
Release date:2006-11-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of the bacterial flagellar hook-filament junction
To be Published
2DPY
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BU of 2dpy by Molmil
Crystal structure of the flagellar type III ATPase FliI
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Flagellum-specific ATP synthase
Authors:Imada, K, Namba, K, Minamino, T.
Deposit date:2006-05-18
Release date:2006-12-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural similarity between the flagellar type III ATPase FliI and F1-ATPase subunits
Proc.Natl.Acad.Sci.Usa, 104, 2007
2ZOV
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BU of 2zov by Molmil
Structure of the periplasmic domain of MotB from Salmonella (crystal form I)
Descriptor: Chemotaxis protein motB
Authors:Imada, K, Kojima, S, Namba, K, Homma, M.
Deposit date:2008-06-09
Release date:2009-06-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Stator assembly and activation mechanism of the flagellar motor by the periplasmic region of MotB
Mol.Microbiol., 73, 2009
3A7M
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BU of 3a7m by Molmil
Structure of FliT, the flagellar type III chaperone for FliD
Descriptor: Flagellar protein fliT
Authors:Imada, K, Minamino, T, Kinoshita, M, Namba, K.
Deposit date:2009-09-29
Release date:2010-04-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural insight into the regulatory mechanisms of interactions of the flagellar type III chaperone FliT with its binding partners.
Proc.Natl.Acad.Sci.USA, 107, 2010
2ZVY
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BU of 2zvy by Molmil
Structure of the periplasmic domain of MotB from Salmonella (crystal form II)
Descriptor: Chemotaxis protein motB
Authors:Kojima, S, Homma, M, Namba, K, Imada, K.
Deposit date:2008-11-26
Release date:2009-09-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Stator assembly and activation mechanism of the flagellar motor by the periplasmic region of MotB
Mol.Microbiol., 73, 2009
2ZVZ
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BU of 2zvz by Molmil
Structure of the periplasmic domain of MotB from Salmonella (crystal form III)
Descriptor: Chemotaxis protein motB
Authors:Imada, K, Kojima, S, Namba, K, Homma, S.
Deposit date:2008-11-26
Release date:2009-09-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Stator assembly and activation mechanism of the flagellar motor by the periplasmic region of MotB
Mol.Microbiol., 73, 2009
3AJC
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BU of 3ajc by Molmil
Structure of the MC domain of FliG (PEV), a CW-biased mutant
Descriptor: Flagellar motor switch protein fliG
Authors:Imada, K, Minamino, T, Kinoshita, M, Namba, K.
Deposit date:2010-05-27
Release date:2011-05-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insight into the rotational switching mechanism of the bacterial flagellar motor
Plos Biol., 9, 2011
2ZF8
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BU of 2zf8 by Molmil
Crystal structure of MotY
Descriptor: Component of sodium-driven polar flagellar motor
Authors:Imada, K, Kojima, S, Namba, K, Homma, M.
Deposit date:2007-12-25
Release date:2008-07-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Insights into the stator assembly of the Vibrio flagellar motor from the crystal structure of MotY
Proc.Natl.Acad.Sci.Usa, 105, 2008
7CLR
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BU of 7clr by Molmil
CryoEM structure of S.typhimurium flagellar LP ring
Descriptor: Flagellar L-ring protein, Flagellar P-ring protein
Authors:Yamaguchi, T, Makino, F, Miyata, T, Minamino, T, Kato, T, Namba, K.
Deposit date:2020-07-21
Release date:2021-06-02
Last modified:2021-12-22
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure of the molecular bushing of the bacterial flagellar motor.
Nat Commun, 12, 2021
2E0Z
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BU of 2e0z by Molmil
Crystal structure of virus-like particle from Pyrococcus furiosus
Descriptor: Virus-like particle
Authors:Akita, F, Chong, K.T, Tanaka, H, Yamashita, E, Miyazaki, N, Nakaishi, Y, Namba, K, Ono, Y, Suzuki, M, Tsukihara, T, Nakagawa, A.
Deposit date:2006-10-16
Release date:2007-04-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:The Crystal Structure of a Virus-like Particle from the Hyperthermophilic Archaeon Pyrococcus furiosus Provides Insight into the Evolution of Viruses
J.Mol.Biol., 368, 2007
6JY0
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BU of 6jy0 by Molmil
CryoEM structure of S.typhimurium R-type straight flagellar filament made of FljB (A461V)
Descriptor: Flagellin
Authors:Yamaguchi, T, Toma, S, Terahara, N, Miyata, T, Minamino, T, Ashikara, M, Namba, K, Kato, T.
Deposit date:2019-04-25
Release date:2020-02-19
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.56 Å)
Cite:Structural and Functional Comparison ofSalmonellaFlagellar Filaments Composed of FljB and FliC.
Biomolecules, 10, 2020
6K9Q
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BU of 6k9q by Molmil
Structure of the native supercoiled hook as a universal joint
Descriptor: Flagellar hook protein FlgE
Authors:Kato, T, Miyata, T, Makino, F, Horvath, P, Namba, K.
Deposit date:2019-06-17
Release date:2020-02-12
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structure of the native supercoiled flagellar hook as a universal joint.
Nat Commun, 10, 2019
6KFK
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BU of 6kfk by Molmil
Structure of Salmonella flagellar hook reveals intermolecular domain interactions for the universal joint function
Descriptor: Flagellar hook protein FlgE
Authors:Horvath, P, Kato, T, Miyata, T, Namba, K.
Deposit date:2019-07-08
Release date:2019-10-16
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structure ofSalmonellaFlagellar Hook Reveals Intermolecular Domain Interactions for the Universal Joint Function.
Biomolecules, 9, 2019
6KN7
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BU of 6kn7 by Molmil
Structure of human cardiac thin filament in the calcium free state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Fujii, T, Yamada, Y, Namba, K.
Deposit date:2019-08-03
Release date:2020-01-15
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (6.6 Å)
Cite:Cardiac muscle thin filament structures reveal calcium regulatory mechanism.
Nat Commun, 11, 2020
6KN8
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BU of 6kn8 by Molmil
Structure of human cardiac thin filament in the calcium bound state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Fujii, T, Yamada, Y, Namba, K.
Deposit date:2019-08-03
Release date:2020-01-15
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Cardiac muscle thin filament structures reveal calcium regulatory mechanism.
Nat Commun, 11, 2020
6LU1
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BU of 6lu1 by Molmil
Cyanobacterial PSI Monomer from T. elongatus by Single Particle CRYO-EM at 3.2 A Resolution
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ...
Authors:Kurisu, G, Coruh, O, Tanaka, H, Gerle, C, Kawamoto, A, Kato, T, Namba, K, Nowaczyk, M.M, Rogner, M, Misumi, Y, Frank, A, Eithar, E.M.
Deposit date:2020-01-24
Release date:2021-03-17
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structure of a functional monomeric Photosystem I from Thermosynechococcus elongatus reveals red chlorophyll cluster.
Commun Biol, 4, 2021
3A69
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BU of 3a69 by Molmil
Atomic model of the bacterial flagellar hook based on docking an X-ray derived structure and terminal two alpha-helices into an 7.1 angstrom resolution cryoEM map
Descriptor: Flagellar hook protein flgE
Authors:Fujii, T, Kato, T, Namba, K.
Deposit date:2009-08-26
Release date:2009-12-15
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (7.1 Å)
Cite:Specific arrangement of alpha-helical coiled coils in the core domain of the bacterial flagellar hook for the universal joint function
Structure, 17, 2009
6TM0
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BU of 6tm0 by Molmil
N-Domain P40/P90 Mycoplasma pneumoniae complexed with 6'SL
Descriptor: Mgp-operon protein 3, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Vizarraga, D, Aparicio, D, Illanes, R, Fita, I, Perez-Luque, R, Martin, J.
Deposit date:2019-12-03
Release date:2020-11-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Immunodominant proteins P1 and P40/P90 from human pathogen Mycoplasma pneumoniae.
Nat Commun, 11, 2020
1CGM
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BU of 1cgm by Molmil
STRUCTURE DETERMINATION OF CUCUMBER GREEN MOTTLE MOSAIC VIRUS BY X-RAY FIBER DIFFRACTION. SIGNIFICANCE FOR THE EVOLUTION OF TOBAMOVIRUSES
Descriptor: CUCUMBER GREEN MOTTLE MOSAIC VIRUS, RNA (5'-R(P*GP*AP*A)-3')
Authors:Wang, H, Stubbs, G.
Deposit date:1993-11-17
Release date:1994-04-30
Last modified:2017-11-29
Method:FIBER DIFFRACTION (3.4 Å)
Cite:Structure determination of cucumber green mottle mosaic virus by X-ray fiber diffraction. Significance for the evolution of tobamoviruses.
J.Mol.Biol., 239, 1994
1VTM
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BU of 1vtm by Molmil
STRUCTURE OF THE U2 STRAIN OF TOBACCO MOSAIC VIRUS REFINED AT 3.5 ANGSTROMS RESOLUTION USING X-RAY FIBER DIFFRACTION
Descriptor: Coat protein, RNA (5'-R(P*GP*AP*A)-3')
Authors:Stubbs, G, Pattanayek, R.
Deposit date:1992-03-30
Release date:1994-07-31
Last modified:2024-02-14
Method:FIBER DIFFRACTION (3.5 Å)
Cite:Structure of the U2 strain of tobacco mosaic virus refined at 3.5 A resolution using X-ray fiber diffraction.
J.Mol.Biol., 228, 1992
2MME
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BU of 2mme by Molmil
Hybrid structure of the Shigella flexneri MxiH Type three secretion system needle
Descriptor: MxiH
Authors:Demers, J.P, Habenstein, B, Loquet, A, Vasa, S.K, Becker, S, Baker, D, Lange, A, Sgourakis, N.G.
Deposit date:2014-03-14
Release date:2014-10-08
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (7.7 Å), SOLID-STATE NMR
Cite:High-resolution structure of the Shigella type-III secretion needle by solid-state NMR and cryo-electron microscopy.
Nat Commun, 5, 2014
3R6M
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BU of 3r6m by Molmil
Crystal structure of Vibrio parahaemolyticus YeaZ
Descriptor: YeaZ, resuscitation promoting factor
Authors:Roujeinikova, A, Aydin, I.
Deposit date:2011-03-21
Release date:2011-09-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural Analysis of the Essential Resuscitation Promoting Factor YeaZ Suggests a Mechanism of Nucleotide Regulation through Dimer Reorganization.
Plos One, 6, 2011
7Y7I
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BU of 7y7i by Molmil
chicken KNL2 in complex with the CENP-A nucleosome
Descriptor: Chains: I, Chains: J, Histone H2A type 1-B/E, ...
Authors:Ariyoshi, M, Jiang, H, Makino, F, Fukagawa, T.
Deposit date:2022-06-22
Release date:2022-07-13
Method:ELECTRON MICROSCOPY (3.42 Å)
Cite:The cryo-EM structure of the CENP-A nucleosome in complex with ggKNL2.
Biorxiv, 2022
5ZUI
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BU of 5zui by Molmil
Crystal Structure of HSP104 from Chaetomium thermophilum
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Heat Shock Protein 104, SULFATE ION
Authors:Hanazono, Y, Inoue, Y, Noguchi, K, Yohda, M, Shinohara, K, Takeda, K, Miki, K.
Deposit date:2018-05-07
Release date:2019-06-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.701 Å)
Cite:Split conformation of Chaetomium thermophilum Hsp104 disaggregase.
Structure, 2021

219515

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