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2D5K
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BU of 2d5k by Molmil
Crystal structure of Dps from Staphylococcus aureus
Descriptor: Dps family protein, GLYCEROL
Authors:Tanaka, Y, Yao, M, Watanabe, N, Tanaka, I.
Deposit date:2005-11-02
Release date:2006-10-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Nucleoid compaction by MrgA(Asp56Ala/Glu60Ala) does not contribute to staphylococcal cell survival against oxidative stress and phagocytic killing by macrophages
FEMS Microbiol. Lett., 360, 2014
2DTM
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BU of 2dtm by Molmil
Thermodynamic and structural analyses of hydrolytic mechanism by catalytic antibodies
Descriptor: IMMUNOGLOBULIN 6D9
Authors:Oda, M, Ito, N, Tsumuraya, T, Suzuki, K, Fujii, I.
Deposit date:2006-07-13
Release date:2007-05-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Thermodynamic and structural basis for transition-state stabilization in antibody-catalyzed hydrolysis
J.Mol.Biol., 369, 2007
1J09
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BU of 1j09 by Molmil
Crystal structure of Thermus thermophilus glutamyl-tRNA synthetase complexed with ATP and Glu
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, GLUTAMIC ACID, Glutamyl-tRNA synthetase, ...
Authors:Sekine, S, Nureki, O, Dubois, D.Y, Bernier, S, Chenevert, R, Lapointe, J, Vassylyev, D.G, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-11-12
Release date:2003-02-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:ATP binding by glutamyl-tRNA synthetase is switched to the productive mode by tRNA binding
EMBO J., 22, 2003
3VI8
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BU of 3vi8 by Molmil
Human PPAR alpha ligand binding domain in complex with a synthetic agonist APHM13
Descriptor: (2S)-2-(4-methoxy-3-{[(pyren-1-ylcarbonyl)amino]methyl}benzyl)butanoic acid, Peroxisome proliferator-activated receptor alpha
Authors:Oyama, T, Miyachi, H, Morikawa, K.
Deposit date:2011-09-25
Release date:2012-08-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Peroxisome proliferator-activated receptors (PPARs) have multiple binding points that accommodate ligands in various conformations: phenylpropanoic acid-type PPAR ligands bind to PPAR in different conformations, depending on the subtype
J.Med.Chem., 55, 2012

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