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3NEZ
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BU of 3nez by Molmil
mRojoA
分子名称: mRojoA
著者Mayo, S.L, Chica, R.A, Moore, M.M.
登録日2010-06-09
公開日2010-10-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Generation of longer emission wavelength red fluorescent proteins using computationally designed libraries.
Proc.Natl.Acad.Sci.USA, 107, 2010
3NF0
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BU of 3nf0 by Molmil
mPlum-TTN
分子名称: D-MALATE, Fluorescent protein plum
著者Mayo, S.L, Chica, R.A, Moore, M.M.
登録日2010-06-09
公開日2010-10-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural Basis for Changes in the Fluorescent Properties of Computationally Designed Red Fluorescent Proteins
To be Published
3NED
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BU of 3ned by Molmil
mRouge
分子名称: ACETATE ION, PAmCherry1 protein, SODIUM ION
著者Mayo, S.L, Chica, R.A, Moore, M.M.
登録日2010-06-08
公開日2010-11-24
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (0.95 Å)
主引用文献Generation of longer emission wavelength red fluorescent proteins using computationally designed libraries.
Proc. Natl. Acad. Sci. U.S.A., 107, 2010
4QTR
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BU of 4qtr by Molmil
Computational design of co-assembling protein-DNA nanowires
分子名称: DNA (5'-D(P*CP*GP*GP*AP*AP*AP*TP*TP*AP*AP*AP*TP*TP*AP*CP*A)-3'), DNA (5'-D(P*GP*TP*GP*TP*AP*AP*TP*TP*TP*AP*AP*TP*TP*TP*CP*C)-3'), dualENH
著者Mou, Y, Mayo, S.L.
登録日2014-07-08
公開日2015-07-29
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Computational design of co-assembling protein-DNA nanowires.
Nature, 525, 2015
4ZN8
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BU of 4zn8 by Molmil
Using molecular dynamics simulations to predict domain swapping of computationally designed protein variants
分子名称: POTASSIUM ION, computationally modified engrailed homeodomain
著者Huang, P.-S, Thomas, L.M, Mayo, S.L.
登録日2015-05-04
公開日2015-05-27
最終更新日2019-11-27
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Using Molecular Dynamics Simulations as an Aid in the Prediction of Domain Swapping of Computationally Designed Protein Variants.
J.Mol.Biol., 427, 2015
1Y66
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BU of 1y66 by Molmil
Dioxane contributes to the altered conformation and oligomerization state of a designed engrailed homeodomain variant
分子名称: 1,4-DIETHYLENE DIOXIDE, ACETIC ACID, CADMIUM ION, ...
著者Hom, G.K, Lassila, J.K, Thomas, L.M, Mayo, S.L.
登録日2004-12-03
公開日2005-03-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Dioxane contributes to the altered conformation and oligomerization state of a designed engrailed homeodomain variant.
Protein Sci., 14, 2005
3S3Z
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BU of 3s3z by Molmil
Crystal Structure an Tandem Cyanovirin-N Dimer, CVN2L10
分子名称: SODIUM ION, Tandem Cyanovirin-N Dimer CVN2L10
著者Keeffe, J.R, Bjorkman, P.J, Mayo, S.L.
登録日2011-05-18
公開日2011-08-03
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Designed oligomers of cyanovirin-N show enhanced HIV neutralization.
Proc.Natl.Acad.Sci.USA, 108, 2011
3S3Y
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BU of 3s3y by Molmil
Crystal Structure an Tandem Cyanovirin-N Dimer, CVN2L0
分子名称: SODIUM ION, TANDEM CYANOVIRIN-N DIMER CVN2L0
著者Keeffe, J.R, Bjorkman, P.J, Mayo, S.L.
登録日2011-05-18
公開日2011-08-03
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Designed oligomers of cyanovirin-N show enhanced HIV neutralization.
Proc.Natl.Acad.Sci.USA, 108, 2011
2MG4
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BU of 2mg4 by Molmil
Computational design and experimental verification of a symmetric protein homodimer
分子名称: Computational designed homodimer
著者Mou, Y, Huang, P.S, Hsu, F.C, Huang, S.J, Mayo, S.L.
登録日2013-10-26
公開日2015-04-08
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Computational design and experimental verification of a symmetric protein homodimer.
Proc.Natl.Acad.Sci.USA, 112, 2015
2P6J
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BU of 2p6j by Molmil
Full-sequence computational design and solution structure of a thermostable protein variant
分子名称: designed engrailed homeodomain variant UVF
著者Shah, P.S, Hom, G.K, Ross, S.A, Lassila, J.K, Crowhurst, K.A, Mayo, S.L.
登録日2007-03-18
公開日2007-08-14
最終更新日2022-03-16
実験手法SOLUTION NMR
主引用文献Full-sequence Computational Design and Solution Structure of a Thermostable Protein Variant.
J.Mol.Biol., 372, 2007
4NDK
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BU of 4ndk by Molmil
Crystal structure of a computational designed engrailed homeodomain variant fused with YFP
分子名称: E23P-YFP, GFP-like fluorescent chromoprotein FP506, related, ...
著者Mou, Y, Mayo, S.L.
登録日2013-10-26
公開日2014-11-05
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Using Molecular Dynamics Simulations as an Aid in the Prediction of Domain Swapping of Computationally Designed Protein Variants.
J.Mol.Biol., 427, 2015
4NDJ
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BU of 4ndj by Molmil
Crystal Structure of a computational designed engrailed homeodomain variant fused with YFP
分子名称: Green fluorescent protein, chimeric construct,GFP-like fluorescent chromoprotein FP506, related
著者Mou, Y, Mayo, S.L.
登録日2013-10-26
公開日2014-11-05
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Using Molecular Dynamics Simulations as an Aid in the Prediction of Domain Swapping of Computationally Designed Protein Variants.
J.Mol.Biol., 427, 2015
4NDL
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BU of 4ndl by Molmil
Computational design and experimental verification of a symmetric homodimer
分子名称: ENH-c2b, computational designed homodimer
著者Mou, Y, Huang, P.S, Hsu, F.C, Huang, S.J, Mayo, S.L.
登録日2013-10-26
公開日2014-11-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Computational design and experimental verification of a symmetric protein homodimer.
Proc.Natl.Acad.Sci.USA, 112, 2015
4OHS
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BU of 4ohs by Molmil
The structure of a far-red fluorescent protein, AQ143
分子名称: CHLORIDE ION, FAR-RED FLUORESCENT PROTEIN AQ143
著者Wannier, T.M, Mayo, S.L.
登録日2014-01-17
公開日2014-02-26
最終更新日2014-08-06
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献The structure of a far-red fluorescent protein, AQ143, shows evidence in support of reported red-shifting chromophore interactions.
Protein Sci., 23, 2014
4PT6
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BU of 4pt6 by Molmil
The discobody: an engineered discoidin domain from factor VIII that binds v 3 integrin with antibody-like affinities
分子名称: Coagulation factor VIII
著者Kym, G, Shi, K, Kamajaya, A, Hamdouche, S, Kostecki, J.S, Wannier, T, Li, B, Nikolovski, P, Mayo, S.L.
登録日2014-03-10
公開日2015-04-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The discobody: an engineered discoidin domain from factor VIII that binds v 3 integrin with antibody-like affinities
To be Published
6DEJ
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BU of 6dej by Molmil
The structure of HcRed7, a brighter and red-shifted HcRed variant
分子名称: CHLORIDE ION, DODECAETHYLENE GLYCOL, GFP-like non-fluorescent chromoprotein, ...
著者Wannier, T.M, Mayo, S.L.
登録日2018-05-12
公開日2018-05-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.6279 Å)
主引用文献Monomerization of far-red fluorescent proteins.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
1EM7
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BU of 1em7 by Molmil
HELIX VARIANT OF THE B1 DOMAIN FROM STREPTOCOCCAL PROTEIN G
分子名称: PROTEIN G
著者Strop, P, Marinescu, A.M, Mayo, S.L.
登録日2000-03-16
公開日2002-05-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of a protein G helix variant suggests the importance of helix propensity and helix dipole interactions in protein design.
Protein Sci., 9, 2000
1FD6
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BU of 1fd6 by Molmil
DELTA0: A COMPUTATIONALLY DESIGNED CORE VARIANT OF THE B1 DOMAIN OF STREPTOCOCCAL PROTEIN G
分子名称: IMMUNOGLOBULIN G BINDING PROTEIN G
著者Ross, S.A, Sarisky, C.A, Su, A, Mayo, S.L.
登録日2000-07-19
公開日2001-09-19
最終更新日2021-11-03
実験手法SOLUTION NMR
主引用文献Designed protein G core variants fold to native-like structures: sequence selection by ORBIT tolerates variation in backbone specification.
Protein Sci., 10, 2001
1FCL
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BU of 1fcl by Molmil
DELTA1.5: A COMPUTATIONALLY DESIGNED CORE VARIANT OF THE B1 DOMAIN OF STREPTOCOCCAL PROTEIN G
分子名称: IMMUNOGLOBULIN G BINDING PROTEIN G
著者Ross, S.A, Sarisky, C.A, Su, A, Mayo, S.L.
登録日2000-07-18
公開日2001-09-19
最終更新日2021-11-03
実験手法SOLUTION NMR
主引用文献Designed protein G core variants fold to native-like structures: sequence selection by ORBIT tolerates variation in backbone specification.
Protein Sci., 10, 2001
1FSD
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BU of 1fsd by Molmil
FULL SEQUENCE DESIGN 1 (FSD-1) OF BETA BETA ALPHA MOTIF, NMR, 41 STRUCTURES
分子名称: FULL SEQUENCE DESIGN 1 OF BETA BETA ALPHA MOTIF
著者Dahiyat, B.I, Mayo, S.L.
登録日1997-06-09
公開日1997-11-12
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献De novo protein design: fully automated sequence selection.
Science, 278, 1997
1FME
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BU of 1fme by Molmil
SOLUTION STRUCTURE OF FSD-EY, A NOVEL PEPTIDE ASSUMING A BETA-BETA-ALPHA FOLD
分子名称: FSD-EY PEPTIDE
著者Sarisky, C.A, Mayo, S.L.
登録日2000-08-16
公開日2001-04-21
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献The beta-beta-alpha fold: explorations in sequence space.
J.Mol.Biol., 307, 2001
1FSV
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BU of 1fsv by Molmil
FULL SEQUENCE DESIGN 1 (FSD-1) OF BETA BETA ALPHA MOTIF, NMR, MINIMIZED AVERAGE STRUCTURE
分子名称: FULL SEQUENCE DESIGN 1 OF BETA BETA ALPHA MOTIF
著者Dahiyat, B.I, Mayo, S.L.
登録日1997-10-26
公開日1998-01-28
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献De novo protein design: fully automated sequence selection.
Science, 278, 1997
1GB4
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BU of 1gb4 by Molmil
HYPERTHERMOPHILIC VARIANT OF THE B1 DOMAIN FROM STREPTOCOCCAL PROTEIN G, NMR, 47 STRUCTURES
分子名称: GB1-C3B4
著者Malakauskas, S.M, Mayo, S.L.
登録日1998-01-19
公開日1998-07-22
最終更新日2021-11-03
実験手法SOLUTION NMR
主引用文献Design, structure and stability of a hyperthermophilic protein variant.
Nat.Struct.Biol., 5, 1998
3O2L
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BU of 3o2l by Molmil
Crystal Structure of an Inactive Kemp Elimination Design HG-1
分子名称: Endo-1,4-beta-xylanase
著者Thomas, L.M, Privett, H.K, Mayo, S.L.
登録日2010-07-22
公開日2011-07-20
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Iterative approach to computational enzyme design.
Proc.Natl.Acad.Sci.USA, 109, 2012
3NYZ
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BU of 3nyz by Molmil
Crystal Structure of Kemp Elimination Catalyst 1A53-2
分子名称: Indole-3-glycerol phosphate synthase, SULFATE ION
著者Lee, T.M, Privett, H.K, Kaiser, J.T, Mayo, S.L.
登録日2010-07-15
公開日2011-06-29
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.514 Å)
主引用文献Iterative approach to computational enzyme design.
Proc.Natl.Acad.Sci.USA, 109, 2012

 

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