Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3FOH
DownloadVisualize
BU of 3foh by Molmil
Fitting of gp18M crystal structure into 3D cryo-EM reconstruction of bacteriophage T4 extended tail
分子名称: Tail sheath protein Gp18
著者Aksyuk, A.A, Leiman, P.G, Kurochkina, L.P, Shneider, M.M, Kostyuchenko, V.A, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2008-12-30
公開日2009-03-10
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (15 Å)
主引用文献The tail sheath structure of bacteriophage T4: a molecular machine for infecting bacteria.
Embo J., 28, 2009
3H2T
DownloadVisualize
BU of 3h2t by Molmil
Crystal structure of gene product 6, baseplate protein of bacteriophage T4
分子名称: Baseplate structural protein Gp6
著者Aksyuk, A.A, Leiman, P.G, Shneider, M.M, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2009-04-14
公開日2009-05-19
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献The structure of gene product 6 of bacteriophage t4, the hinge-pin of the baseplate.
Structure, 17, 2009
3H3W
DownloadVisualize
BU of 3h3w by Molmil
Fitting of the gp6 crystal structure into 3D cryo-EM reconstruction of bacteriophage T4 dome-shaped baseplate
分子名称: Baseplate structural protein Gp6
著者Aksyuk, A.A, Leiman, P.G, Shneider, M.M, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2009-04-17
公開日2009-05-19
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (12 Å)
主引用文献The structure of gene product 6 of bacteriophage T4, the hinge-pin of the baseplate.
Structure, 17, 2009
3H3Y
DownloadVisualize
BU of 3h3y by Molmil
Fitting of the gp6 crystal structure into 3D cryo-EM reconstruction of bacteriophage T4 star-shaped baseplate
分子名称: Baseplate structural protein Gp6
著者Aksyuk, A.A, Leiman, P.G, Shneider, M.M, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2009-04-17
公開日2009-05-19
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (16 Å)
主引用文献The structure of gene product 6 of bacteriophage T4, the hinge-pin of the baseplate.
Structure, 17, 2009
2P5Z
DownloadVisualize
BU of 2p5z by Molmil
The E. coli c3393 protein is a component of the type VI secretion system and exhibits structural similarity to T4 bacteriophage tail proteins gp27 and gp5
分子名称: Type VI secretion system component
著者Ramagopal, U.A, Bonanno, J.B, Sridhar, V, Lau, C, Toro, R, Gheyi, T, Maletic, M, Freeman, J.C, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2007-03-16
公開日2007-04-03
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Type VI secretion apparatus and phage tail-associated protein complexes share a common evolutionary origin.
Proc.Natl.Acad.Sci.Usa, 106, 2009
7MHU
DownloadVisualize
BU of 7mhu by Molmil
Sialidase24 apo
分子名称: Exo-alpha-sialidase
著者Rees, S.D, Chang, G.A.
登録日2021-04-15
公開日2022-02-23
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Computational models in the service of X-ray and cryo-electron microscopy structure determination.
Proteins, 89, 2021
1ZKU
DownloadVisualize
BU of 1zku by Molmil
Fitting of the gp9 structure in the EM density of bacteriophage T4 extended tail
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Baseplate structural protein Gp9
著者Kostyuchenko, V.A.
登録日2005-05-04
公開日2005-08-09
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (15 Å)
主引用文献The tail structure of bacteriophage T4 and its mechanism of contraction.
Nat.Struct.Mol.Biol., 12, 2005
6F45
DownloadVisualize
BU of 6f45 by Molmil
Crystal structure of the gp37-gp38 adhesin tip complex of the bacteriophage S16 long tail fiber
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, IMIDAZOLE, ...
著者Dunne, M, Leiman, P, Klumpp, J, Loessner, M.J.
登録日2017-11-29
公開日2018-08-01
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.70355821 Å)
主引用文献Salmonella Phage S16 Tail Fiber Adhesin Features a Rare Polyglycine Rich Domain for Host Recognition.
Structure, 26, 2018
6SD8
DownloadVisualize
BU of 6sd8 by Molmil
Bd2924 apo-form
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Probable acyl-CoA dehydrogenase
著者Lovering, A.L, Harding, C.J.
登録日2019-07-26
公開日2019-09-11
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Target highlights in CASP13: Experimental target structures through the eyes of their authors.
Proteins, 87, 2019
6SDA
DownloadVisualize
BU of 6sda by Molmil
Bd2924 C10 acyl-coenzymeA bound form
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Probable acyl-CoA dehydrogenase, decanoyl-CoA
著者Lovering, A.L, Harding, C.J.
登録日2019-07-26
公開日2019-09-11
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Target highlights in CASP13: Experimental target structures through the eyes of their authors.
Proteins, 87, 2019
6W4Q
DownloadVisualize
BU of 6w4q by Molmil
Crystal structure of full-length tailspike protein 2 (TSP2, ORF211) ) from Escherichia coli O157:H7 bacteriophage CAB120
分子名称: 1,2-ETHANEDIOL, CARBONATE ION, CHLORIDE ION, ...
著者Greenfield, J, Herzberg, O.
登録日2020-03-11
公開日2021-01-20
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure and function of bacteriophage CBA120 ORF211 (TSP2), the determinant of phage specificity towards E. coli O157:H7.
Sci Rep, 10, 2020
6CVZ
DownloadVisualize
BU of 6cvz by Molmil
Crystal structure of the WD40-repeat of RFWD3
分子名称: E3 ubiquitin-protein ligase RFWD3, MAGNESIUM ION
著者DONG, A, LOPPNAU, P, SEITOVA, A, HUTCHINSON, A, TEMPEL, W, WEI, Y, Bountra, C, Arrowsmith, C.H, Edwards, A.M, BROWN, P.J, TONG, Y, Structural Genomics Consortium (SGC)
登録日2018-03-29
公開日2018-06-27
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Target highlights in CASP13: Experimental target structures through the eyes of their authors.
Proteins, 87, 2019
3GQ7
DownloadVisualize
BU of 3gq7 by Molmil
Crystal Structure of the Bacteriophage Phi29 Gene Product 12 N-terminal Fragment
分子名称: CALCIUM ION, CARBONATE ION, MAGNESIUM ION, ...
著者Xiang, Y, Rossmann, M.G.
登録日2009-03-24
公開日2009-05-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystallographic insights into the autocatalytic assembly mechanism of a bacteriophage tail spike.
Mol.Cell, 34, 2009
3GQ8
DownloadVisualize
BU of 3gq8 by Molmil
Crystal Structure of the Bacteriophage phi29 gene product 12 N-terminal fragment in complex with 2-(N-cyclohexylamino)ethane sulfonic acid (CHES)
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, CALCIUM ION, CARBONATE ION, ...
著者Xiang, Y, Rossmann, M.G.
登録日2009-03-24
公開日2009-05-26
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystallographic insights into the autocatalytic assembly mechanism of a bacteriophage tail spike.
Mol.Cell, 34, 2009
3GQA
DownloadVisualize
BU of 3gqa by Molmil
Crystal Structure of the Bacteriophage phi29 gene product 12 N-terminal fragment in complex with cobalt ions
分子名称: COBALT (II) ION, PHOSPHATE ION, Preneck appendage protein
著者Xiang, Y, Rossmann, M.G.
登録日2009-03-24
公開日2009-05-26
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystallographic insights into the autocatalytic assembly mechanism of a bacteriophage tail spike.
Mol.Cell, 34, 2009
3GQK
DownloadVisualize
BU of 3gqk by Molmil
Crystal Structure of the Bacteriophage phi29 gene product 12 C-terminal fragment in complex with ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Preneck appendage protein
著者Xiang, Y, Rossmann, M.G.
登録日2009-03-24
公開日2009-05-26
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystallographic insights into the autocatalytic assembly mechanism of a bacteriophage tail spike.
Mol.Cell, 34, 2009
3GQ9
DownloadVisualize
BU of 3gq9 by Molmil
Crystal Structure of the Bacteriophage phi29 gene product 12 N-terminal fragment in an apo form
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, Preneck appendage protein, SODIUM ION
著者Xiang, Y, Rossmann, M.G.
登録日2009-03-24
公開日2009-05-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystallographic insights into the autocatalytic assembly mechanism of a bacteriophage tail spike.
Mol.Cell, 34, 2009
3GQH
DownloadVisualize
BU of 3gqh by Molmil
Crystal Structure of the Bacteriophage phi29 gene product 12 C-terminal fragment
分子名称: Preneck appendage protein
著者Xiang, Y, Rossmann, M.G.
登録日2009-03-24
公開日2009-05-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystallographic insights into the autocatalytic assembly mechanism of a bacteriophage tail spike.
Mol.Cell, 34, 2009
3J2M
DownloadVisualize
BU of 3j2m by Molmil
The X-ray structure of the gp15 hexamer and the model of the gp18 protein fitted into the cryo-EM reconstruction of the extended T4 tail
分子名称: Tail connector protein Gp15, Tail sheath protein Gp18
著者Fokine, A, Zhang, Z, Kanamaru, S, Bowman, V.D, Aksyuk, A, Arisaka, F, Rao, V.B, Rossmann, M.G.
登録日2012-11-09
公開日2013-03-06
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (15 Å)
主引用文献The molecular architecture of the bacteriophage t4 neck.
J.Mol.Biol., 425, 2013
3J2N
DownloadVisualize
BU of 3j2n by Molmil
The X-ray structure of the gp15 hexamer and the model of the gp18 protein fitted into the cryo-EM reconstruction of the contracted T4 tail
分子名称: Tail connector protein Gp15, Tail sheath protein Gp18
著者Fokine, A, Zhang, Z, Kanamaru, S, Bowman, V.D, Aksyuk, A, Arisaka, F, Rao, V.B, Rossmann, M.G.
登録日2012-11-10
公開日2013-03-06
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (16 Å)
主引用文献The molecular architecture of the bacteriophage t4 neck.
J.Mol.Biol., 425, 2013
6CP9
DownloadVisualize
BU of 6cp9 by Molmil
Contact-dependent growth inhibition toxin - immunity protein complex from Klebsiella pneumoniae 342
分子名称: CdiA, CdiI
著者Michalska, K, Stols, L, Eschenfeldt, W, Hayes, C.S, Goulding, C.W, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Structure-Function Analysis of Polymorphic CDI Toxin-Immunity Protein Complexes (UC4CDI)
登録日2018-03-13
公開日2019-03-13
最終更新日2020-01-01
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Convergent Evolution of the Barnase/EndoU/Colicin/RelE (BECR) Fold in Antibacterial tRNase Toxins.
Structure, 27, 2019
6CP8
DownloadVisualize
BU of 6cp8 by Molmil
Contact-dependent growth inhibition toxin-immunity protein complex from from E. coli 3006
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CdiA, CdiI, ...
著者Michalska, K, Stols, L, Eschenfeldt, W, Hayes, C.S, Goulding, C.W, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Structure-Function Analysis of Polymorphic CDI Toxin-Immunity Protein Complexes (UC4CDI)
登録日2018-03-13
公開日2019-03-13
最終更新日2020-01-01
実験手法X-RAY DIFFRACTION (2.201 Å)
主引用文献Convergent Evolution of the Barnase/EndoU/Colicin/RelE (BECR) Fold in Antibacterial tRNase Toxins.
Structure, 27, 2019

219869

件を2024-05-15に公開中

PDB statisticsPDBj update infoContact PDBjnumon