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1YG0
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BU of 1yg0 by Molmil
Solution structure of apo-CopP from Helicobacter pylori
分子名称: COP associated protein
著者Lee, B.J, Park, S.J.
登録日2005-01-04
公開日2006-01-24
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献Solution structure of apo-CopP from Helicobacter pylori
To be published
4Z1A
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BU of 4z1a by Molmil
Structure of apo form KDO8PS from H.pylori
分子名称: 2-dehydro-3-deoxyphosphooctonate aldolase
著者Lee, B.J, Cho, S, Im, H, Yoon, H.J.
登録日2015-03-27
公開日2016-03-09
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Identification of novel scaffolds for potential anti-Helicobacter pylori agents based on the crystal structure of H. pylori 3-deoxy-d-manno-octulosonate 8-phosphate synthase (HpKDO8PS).
Eur.J.Med.Chem., 108, 2016
4Z1D
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BU of 4z1d by Molmil
Structure of PEP and zinc bound KDO8PS from H.pylori
分子名称: 2-dehydro-3-deoxyphosphooctonate aldolase, PHOSPHOENOLPYRUVATE, ZINC ION
著者Lee, B.J, Cho, S, Im, H, Yoon, H.J.
登録日2015-03-27
公開日2016-03-09
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Identification of novel scaffolds for potential anti-Helicobacter pylori agents based on the crystal structure of H. pylori 3-deoxy-d-manno-octulosonate 8-phosphate synthase (HpKDO8PS).
Eur.J.Med.Chem., 108, 2016
4Z1B
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BU of 4z1b by Molmil
Structure of H204A mutant KDO8PS from H.pylori
分子名称: 2-dehydro-3-deoxyphosphooctonate aldolase
著者Lee, B.J, Cho, S, Im, H, Yoon, H.J.
登録日2015-03-27
公開日2016-03-09
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Identification of novel scaffolds for potential anti-Helicobacter pylori agents based on the crystal structure of H. pylori 3-deoxy-d-manno-octulosonate 8-phosphate synthase (HpKDO8PS).
Eur.J.Med.Chem., 108, 2016
4Z1C
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BU of 4z1c by Molmil
Structure of Cadmium bound KDO8PS from H.pylori
分子名称: 2-dehydro-3-deoxyphosphooctonate aldolase, CADMIUM ION
著者Lee, B.J, Cho, S, Im, H, Yoon, H.J.
登録日2015-03-27
公開日2016-03-09
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Identification of novel scaffolds for potential anti-Helicobacter pylori agents based on the crystal structure of H. pylori 3-deoxy-d-manno-octulosonate 8-phosphate synthase (HpKDO8PS).
Eur.J.Med.Chem., 108, 2016
7VHV
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BU of 7vhv by Molmil
Crystal structure of S. aureus D-alanine alanyl carrier protein ligase
分子名称: ADENOSINE-5'-TRIPHOSPHATE, D-alanine--D-alanyl carrier protein ligase, MAGNESIUM ION
著者Lee, B.J, Lee, I.-G, Im, H.G, Yoon, H.J.
登録日2021-09-23
公開日2022-04-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural and functional analysis of the D-alanyl carrier protein ligase DltA from Staphylococcus aureus Mu50.
Acta Crystallogr D Struct Biol, 78, 2022
4N9H
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BU of 4n9h by Molmil
Crystal structure of Transcription regulation Protein CRP
分子名称: Catabolite gene activator
著者Lee, B.J, Seok, S.H, Im, H, Yoon, H.J.
登録日2013-10-21
公開日2014-07-09
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structures of inactive CRP species reveal the atomic details of the allosteric transition that discriminates cyclic nucleotide second messengers.
Acta Crystallogr.,Sect.D, 70, 2014
4LTT
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BU of 4ltt by Molmil
Crystal structure of native apo toxin from Helicobacter pylori
分子名称: Uncharacterized protein, toxin
著者Lee, B.J, Im, H, Pathak, C.C, Yoon, H.J.
登録日2013-07-23
公開日2014-02-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献Crystal structure of apo and copper bound HP0894 toxin from Helicobacter pylori 26695 and insight into mRNase activity
Biochim.Biophys.Acta, 1834, 2013
4LSY
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BU of 4lsy by Molmil
Crystal structure of copper-bound L66S mutant toxin from Helicobacter pylori
分子名称: CITRATE ANION, COPPER (II) ION, Uncharacterized protein, ...
著者Lee, B.J, Im, H, Pathak, C.C, Yoon, H.J.
登録日2013-07-23
公開日2014-02-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.895 Å)
主引用文献Crystal structure of apo and copper bound HP0894 toxin from Helicobacter pylori 26695 and insight into mRNase activity
Biochim.Biophys.Acta, 1834, 2013
4NRN
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BU of 4nrn by Molmil
Crystal structure of metal-bound toxin from Helicobacter pylori
分子名称: ZINC ION, metal-bound toxin
著者Lee, B.J, Im, H, Pathak, C, Jang, S.B.
登録日2013-11-27
公開日2014-10-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.802 Å)
主引用文献Crystal structure of toxin HP0892 from Helicobacter pylori with two Zn(II) at 1.8 angstrom resolution
Protein Sci., 23, 2014
4Z9E
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BU of 4z9e by Molmil
Alba from Thermoplasma volcanium
分子名称: DNA/RNA-binding protein Alba
著者Ma, C, Lee, S.J, Pathak, C, Lee, B.J.
登録日2015-04-10
公開日2016-02-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Alba from Thermoplasma volcanium belongs to alpha-NAT's: An insight into the structural aspects of Tv Alba and its acetylation by Tv Ard1.
Arch.Biochem.Biophys., 590, 2016
5HS9
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BU of 5hs9 by Molmil
Crystal structure of the quinone-bound YodB from B. subtilis
分子名称: HTH-type transcriptional regulator YodB
著者Lee, S.J, Lee, I.G, Lee, B.J.
登録日2016-01-25
公開日2016-08-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Two distinct mechanisms of transcriptional regulation by the redox sensor YodB
Proc.Natl.Acad.Sci.USA, 113, 2016
5HS7
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BU of 5hs7 by Molmil
Reduced form of the transcriptional regulator YodB from B. subtilis
分子名称: GLYCEROL, HTH-type transcriptional regulator YodB
著者Lee, S.J, Lee, I.G, Lee, B.J.
登録日2016-01-25
公開日2016-08-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Two distinct mechanisms of transcriptional regulation by the redox sensor YodB
Proc.Natl.Acad.Sci.USA, 113, 2016
5HS8
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BU of 5hs8 by Molmil
Crystal structure of the diamide-treated YodB from B. subtilis
分子名称: HTH-type transcriptional regulator YodB
著者Lee, S.J, Lee, I.G, Lee, B.J.
登録日2016-01-25
公開日2016-08-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Two distinct mechanisms of transcriptional regulation by the redox sensor YodB
Proc.Natl.Acad.Sci.USA, 113, 2016
3U7K
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BU of 3u7k by Molmil
Crystal structures of the Staphylococcus aureus peptide deformylase in complex with two classes of new inhibitors
分子名称: (S)-N-(cyclopentylmethyl)-N-(2-(hydroxyamino)-2-oxoethyl)-2-(3-(2-methoxyphenyl)ureido)-3,3-dimethylbutanamide, Peptide deformylase, ZINC ION
著者Lee, S.J, Lee, S.-J, Lee, S.K, Yoon, H.-J, Lee, H.H, Kim, K.K, Lee, B.J, Suh, S.W.
登録日2011-10-14
公開日2012-06-27
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structures of Staphylococcus aureus peptide deformylase in complex with two classes of new inhibitors
Acta Crystallogr.,Sect.D, 68, 2012
3U7N
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BU of 3u7n by Molmil
Crystal structures of the Staphylococcus aureus peptide deformylase in complex with two classes of new inhibitors
分子名称: N-((2R,4S)-2-butyl-5-methyl-4-(3-(5-methylpyridin-2-yl)ureido)-3-oxohexyl)-N-hydroxyformamide, Peptide deformylase, ZINC ION
著者Lee, S.J, Lee, S.-J, Lee, S.K, Yoon, H.-J, Lee, H.H, Kim, K.K, Lee, B.J, Suh, S.W.
登録日2011-10-14
公開日2012-06-27
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structures of Staphylococcus aureus peptide deformylase in complex with two classes of new inhibitors
Acta Crystallogr.,Sect.D, 68, 2012
3U7L
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BU of 3u7l by Molmil
Crystal structures of the Staphylococcus aureus peptide deformylase in complex with two classes of new inhibitors
分子名称: (S)-N-(cyclopentylmethyl)-2-(3-(3,5-difluorophenyl)ureido)-N-(2-(hydroxyamino)-2-oxoethyl)-3,3-dimethylbutanamide, Peptide deformylase, ZINC ION
著者Lee, S.J, Lee, S.-J, Lee, S.K, Yoon, H.-J, Lee, H.H, Kim, K.K, Lee, B.J, Suh, S.W.
登録日2011-10-14
公開日2012-06-27
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Structures of Staphylococcus aureus peptide deformylase in complex with two classes of new inhibitors
Acta Crystallogr.,Sect.D, 68, 2012
3U7M
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BU of 3u7m by Molmil
Crystal structures of the Staphylococcus aureus peptide deformylase in complex with two classes of new inhibitors
分子名称: N-((2R,4S)-2-butyl-4-(3-(2-fluorophenyl)ureido)-5-methyl-3-oxohexyl)-N-hydroxyformamide, Peptide deformylase, ZINC ION
著者Lee, S.J, Lee, S.-J, Lee, S.K, Yoon, H.-J, Lee, H.H, Kim, K.K, Lee, B.J, Suh, S.W.
登録日2011-10-14
公開日2012-06-27
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structures of Staphylococcus aureus peptide deformylase in complex with two classes of new inhibitors
Acta Crystallogr.,Sect.D, 68, 2012
8H0H
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BU of 8h0h by Molmil
Hypotethical protein from Mycobacterium tuberculsosis
分子名称: Uncharacterized protein Rv1546
著者Kim, D.H, Na, Y, Lee, B.J.
登録日2022-09-29
公開日2023-09-06
実験手法X-RAY DIFFRACTION (2.74 Å)
主引用文献Domain swapping of the C-terminal helix promotes the dimerization of a novel ribonuclease protein from Mycobacterium tuberculosis.
Protein Sci., 32, 2023
8H2D
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BU of 8h2d by Molmil
The hypothetical protein from Mycobacterium tuberculosis mutant - E47A
分子名称: Uncharacterized protein Rv1546
著者Kim, D.H, Na, Y, Lee, B.J.
登録日2022-10-05
公開日2023-09-06
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Domain swapping of the C-terminal helix promotes the dimerization of a novel ribonuclease protein from Mycobacterium tuberculosis.
Protein Sci., 32, 2023
3UI3
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BU of 3ui3 by Molmil
Structural and Biochemical Characterization of HP0315 from Helicobacter pylori as a VapD Protein with an Endoribonuclease Activity
分子名称: Immunoglobulin G-binding protein G, Virulence-associated protein D
著者Kwon, A.R, Kim, J.H, Lee, B.J.
登録日2011-11-04
公開日2012-02-08
最終更新日2017-08-23
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural and biochemical characterization of HP0315 from Helicobacter pylori as a VapD protein with an endoribonuclease activity.
Nucleic Acids Res., 2012
4PV6
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BU of 4pv6 by Molmil
Crystal Structure Analysis of Ard1 from Thermoplasma volcanium
分子名称: ACETYL COENZYME *A, COENZYME A, N-terminal acetyltransferase complex subunit [ARD1]
著者Ma, C, Lee, S.J, Lee, B.J.
登録日2014-03-15
公開日2015-01-21
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.32 Å)
主引用文献Structure of Thermoplasma volcanium Ard1 belongs to N-acetyltransferase family member suggesting multiple ligand binding modes with acetyl coenzyme A and coenzyme A.
Biochim.Biophys.Acta, 1844, 2014
6IFM
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BU of 6ifm by Molmil
Crystal structure of DNA bound VapBC from Salmonella typhimurium
分子名称: Antitoxin VapB, DNA backward (27-MER), DNA forward (27-MER), ...
著者Park, D.W, Lee, B.J.
登録日2018-09-20
公開日2020-01-29
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.804 Å)
主引用文献Crystal structure of proteolyzed VapBC and DNA-bound VapBC from Salmonella enterica Typhimurium LT2 and VapC as a putative Ca2+-dependent ribonuclease.
Faseb J., 34, 2020
6IFC
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BU of 6ifc by Molmil
Crystal structure of VapBC from Salmonella typhimurium
分子名称: Antitoxin VapB, CALCIUM ION, tRNA(fMet)-specific endonuclease VapC
著者Park, D.W, Lee, B.J.
登録日2018-09-19
公開日2020-01-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Crystal structure of proteolyzed VapBC and DNA-bound VapBC from Salmonella enterica Typhimurium LT2 and VapC as a putative Ca2+-dependent ribonuclease.
Faseb J., 34, 2020
4Y1E
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BU of 4y1e by Molmil
SAV1875-C105D
分子名称: Uncharacterized protein SAV1875
著者Kim, H.J, Kwon, A.R, Lee, B.J.
登録日2015-02-07
公開日2016-01-06
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural and functional insight into the different oxidation states of SAV1875 from Staphylococcus aureus
Biochem.J., 473, 2016

 

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