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1GEQ
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BU of 1geq by Molmil
Entropic stabilization of the tryptophan synthase A-subunit from a hyperthermophile, pyrococcus furiosus: X-ray analysis and calorimetry
分子名称: TRYPTOPHAN SYNTHASE ALPHA-SUBUNIT
著者Yutani, K, Yamagata, Y.
登録日2000-11-21
公開日2000-12-13
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Entropic stabilization of the tryptophan synthase alpha-subunit from a hyperthermophile, Pyrococcus furiosus. X-ray analysis and calorimetry.
J.Biol.Chem., 276, 2001
1CKC
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BU of 1ckc by Molmil
T43A MUTANT HUMAN LYSOZYME
分子名称: PROTEIN (LYSOZYME), SODIUM ION
著者Takano, K, Yamagata, Y, Funahashi, J, Yutani, K.
登録日1999-04-22
公開日1999-04-30
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Contribution of intra- and intermolecular hydrogen bonds to the conformational stability of human lysozyme(,).
Biochemistry, 38, 1999
1CKG
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BU of 1ckg by Molmil
T52V MUTANT HUMAN LYSOZYME
分子名称: Lysozyme C
著者Takano, K, Yamagata, Y, Funahashi, J, Yutani, K.
登録日1999-04-22
公開日1999-05-05
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Contribution of intra- and intermolecular hydrogen bonds to the conformational stability of human lysozyme(,).
Biochemistry, 38, 1999
1CJ9
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BU of 1cj9 by Molmil
T40V MUTANT HUMAN LYSOZYME
分子名称: PROTEIN (LYSOZYME), SODIUM ION
著者Takano, K, Yamagata, Y, Funahashi, J, Yutani, K.
登録日1999-04-22
公開日1999-04-30
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Contribution of intra- and intermolecular hydrogen bonds to the conformational stability of human lysozyme(,).
Biochemistry, 38, 1999
1CKF
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BU of 1ckf by Molmil
T52A MUTANT HUMAN LYSOZYME
分子名称: PROTEIN (LYSOZYME), SODIUM ION
著者Takano, K, Yamagata, Y, Funahashi, J, Yutani, K.
登録日1999-04-22
公開日1999-04-30
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Contribution of intra- and intermolecular hydrogen bonds to the conformational stability of human lysozyme(,).
Biochemistry, 38, 1999
1CJ6
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BU of 1cj6 by Molmil
T11A MUTANT HUMAN LYSOZYME
分子名称: PROTEIN (LYSOZYME), SODIUM ION
著者Takano, K, Yamagata, Y, Funahashi, J, Yutani, K.
登録日1999-04-22
公開日1999-04-30
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Contribution of intra- and intermolecular hydrogen bonds to the conformational stability of human lysozyme(,).
Biochemistry, 38, 1999
1CJ8
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BU of 1cj8 by Molmil
T40A MUTANT HUMAN LYSOZYME
分子名称: PROTEIN (LYSOZYME), SODIUM ION
著者Takano, K, Yamagata, Y, Funahashi, J, Yutani, K.
登録日1999-04-22
公開日1999-04-30
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Contribution of intra- and intermolecular hydrogen bonds to the conformational stability of human lysozyme(,).
Biochemistry, 38, 1999
1CJ7
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BU of 1cj7 by Molmil
T11V MUTANT HUMAN LYSOZYME
分子名称: PROTEIN (LYSOZYME), SODIUM ION
著者Takano, K, Yamagata, Y, Funahashi, J, Yutani, K.
登録日1999-04-22
公開日1999-04-30
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Contribution of intra- and intermolecular hydrogen bonds to the conformational stability of human lysozyme(,).
Biochemistry, 38, 1999
1SPA
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BU of 1spa by Molmil
ROLE OF ASP222 IN THE CATALYTIC MECHANISM OF ESCHERICHIA COLI ASPARTATE AMINOTRANSFERASE: THE AMINO ACID RESIDUE WHICH ENHANCES THE FUNCTION OF THE ENZYME-BOUND COENZYME PYRIDOXAL 5'-PHOSPHATE
分子名称: ASPARTATE AMINOTRANSFERASE, N-METHYL-4-DEOXY-4-AMINO-PYRIDOXAL-5-PHOSPHATE
著者Hinoue, Y, Yano, T, Metzler, D.E, Miyahara, I, Hirotsu, K, Kagamiyama, H.
登録日1993-01-26
公開日1993-10-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Role of Asp222 in the catalytic mechanism of Escherichia coli aspartate aminotransferase: the amino acid residue which enhances the function of the enzyme-bound coenzyme pyridoxal 5'-phosphate.
Biochemistry, 31, 1992
1CKD
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BU of 1ckd by Molmil
T43V MUTANT HUMAN LYSOZYME
分子名称: PROTEIN (LYSOZYME), SODIUM ION
著者Takano, K, Yamagata, Y, Funahashi, J, Yutani, K.
登録日1999-04-22
公開日1999-04-30
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Contribution of intra- and intermolecular hydrogen bonds to the conformational stability of human lysozyme(,).
Biochemistry, 38, 1999
1CKH
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BU of 1ckh by Molmil
T70V MUTANT HUMAN LYSOZYME
分子名称: PROTEIN (LYSOZYME)
著者Takano, K, Yamagata, Y, Funahashi, J, Yutani, K.
登録日1999-04-22
公開日1999-04-30
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Contribution of intra- and intermolecular hydrogen bonds to the conformational stability of human lysozyme(,).
Biochemistry, 38, 1999
1X56
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BU of 1x56 by Molmil
Crystal structure of asparaginyl-tRNA synthetase from Pyrococcus horikoshii
分子名称: Asparaginyl-tRNA synthetase
著者Iwasaki, W, Sekine, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-15
公開日2006-05-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Structural Basis of the Water-assisted Asparagine Recognition by Asparaginyl-tRNA Synthetase.
J.Mol.Biol., 360, 2006
1X55
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BU of 1x55 by Molmil
Crystal structure of asparaginyl-tRNA synthetase from Pyrococcus horikoshii complexed with asparaginyl-adenylate analogue
分子名称: 5'-O-[N-(L-ASPARAGINYL)SULFAMOYL]ADENOSINE, Asparaginyl-tRNA synthetase, MAGNESIUM ION, ...
著者Iwasaki, W, Sekine, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-15
公開日2006-05-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural Basis of the Water-assisted Asparagine Recognition by Asparaginyl-tRNA Synthetase.
J.Mol.Biol., 360, 2006
1X54
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BU of 1x54 by Molmil
Crystal structure of asparaginyl-tRNA synthetase from Pyrococcus horikoshii complexed with asparaginyl-adenylate
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-AMINO-1,4-DIOXOBUTAN-2-AMINIUM ADENOSINE-5'-MONOPHOSPHATE, Asparaginyl-tRNA synthetase, ...
著者Iwasaki, W, Sekine, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-15
公開日2006-05-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structural Basis of the Water-assisted Asparagine Recognition by Asparaginyl-tRNA Synthetase.
J.Mol.Biol., 360, 2006
1WJX
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BU of 1wjx by Molmil
Crystal sturucture of TT0801 from Thermus thermophilus
分子名称: POTASSIUM ION, SsrA-binding protein
著者Bessho, Y, Shibata, R, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-29
公開日2004-11-29
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis for functional mimicry of long-variable-arm tRNA by transfer-messenger RNA.
Proc.Natl.Acad.Sci.Usa, 104, 2007
4NZY
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BU of 4nzy by Molmil
Crystal structure (type-2) of dTMP kinase (st1543) from Sulfolobus Tokodaii Strain7
分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, ...
著者Biswas, A, Jeyakanthan, J, Sekar, K, Kuramitsu, S, Yokoyama, S.
登録日2013-12-13
公開日2014-12-24
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Insight into Substrate Binding Mechanism in Thymidylate Kinase based on Intrinsic Dynamics of the Active Site
To be Published
4S35
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BU of 4s35 by Molmil
AMPPCP and TMP bound Crystal structure of thymidylate kinase (aq_969) from Aquifex Aeolicus VF5
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, MAGNESIUM ION, ...
著者Biswas, A, Jeyakanthan, J, Sekar, K, Kuramitsu, S, Yokoyama, S.
登録日2015-01-26
公開日2016-01-27
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structural studies of a hyperthermophilic thymidylate kinase enzyme reveal conformational substates along the reaction coordinate.
Febs J., 284, 2017
1VS3
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BU of 1vs3 by Molmil
Crystal Structure of the tRNA Pseudouridine Synthase TruA From Thermus thermophilus HB8
分子名称: tRNA pseudouridine synthase A
著者Dong, X, Bessho, Y, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-06-28
公開日2006-12-12
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal structure of tRNA pseudouridine synthase TruA from Thermus thermophilus HB8.
Rna Biol., 3, 2006
1WD5
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BU of 1wd5 by Molmil
Crystal structure of TT1426 from Thermus thermophilus HB8
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, hypothetical protein TT1426
著者Shibata, R, Kukimoto-Niino, M, Murayama, K, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-11
公開日2004-11-11
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of a predicted phosphoribosyltransferase (TT1426) from Thermus thermophilus HB8 at 2.01 A resolution
Protein Sci., 14, 2005
1V3W
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BU of 1v3w by Molmil
Structure of Ferripyochelin binding protein from Pyrococcus horikoshii OT3
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
著者Jeyakanthan, J, Tahirov, T.H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-11-07
公開日2003-11-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Observation of a calcium-binding site in the gamma-class carbonic anhydrase from Pyrococcus horikoshii.
Acta Crystallogr.,Sect.D, 64, 2008
1V67
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BU of 1v67 by Molmil
Structure of ferripyochelin binding protein from pyrococcus horikoshii OT3
分子名称: BICARBONATE ION, CALCIUM ION, ZINC ION, ...
著者Jeyakanthan, J, Tahirov, T.H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-11-27
公開日2003-12-09
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Observation of a calcium-binding site in the gamma-class carbonic anhydrase from Pyrococcus horikoshii.
Acta Crystallogr.,Sect.D, 64, 2008
3EOQ
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BU of 3eoq by Molmil
The crystal structure of putative zinc protease beta-subunit from Thermus thermophilus HB8
分子名称: Putative zinc protease
著者Ohtsuka, J, Ichihara, Y, Ebihara, A, Yokoyama, S, Kuramitsu, S, Nagata, K, Tanokura, M.
登録日2008-09-29
公開日2009-03-17
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Crystal structure of TTHA1264, a putative M16-family zinc peptidase from Thermus thermophilus HB8 that is homologous to the beta subunit of mitochondrial processing peptidase.
Proteins, 2009
3HPE
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BU of 3hpe by Molmil
Crystal structure of yceI (HP1286) from Helicobacter pylori
分子名称: (13Z)-docos-13-enamide, Conserved hypothetical secreted protein
著者Sisinni, L, Cendron, L, Zanotti, G.
登録日2009-06-04
公開日2010-04-14
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Helicobacter pylori acidic stress response factor HP1286 is a YceI homolog with new binding specificity.
Febs J., 277, 2010
1WLV
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BU of 1wlv by Molmil
Crystal structure of TT0310 protein from Thermus thermophilus HB8
分子名称: ACETATE ION, CHLORIDE ION, COENZYME A, ...
著者Kunishima, N, Sugahara, M, Miyano, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-06-29
公開日2005-07-05
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A Novel Induced-fit Reaction Mechanism of Asymmetric Hot Dog Thioesterase PaaI
J.Mol.Biol., 352, 2005
1WM6
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BU of 1wm6 by Molmil
Crystal structure of TT0310 protein from Thermus thermophilus HB8
分子名称: CHLORIDE ION, phenylacetic acid degradation protein PaaI
著者Sugahara, M, Kunishima, N, Miyano, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-07-04
公開日2005-07-05
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献A Novel Induced-fit Reaction Mechanism of Asymmetric Hot Dog Thioesterase PaaI
J.Mol.Biol., 352, 2005

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