2Z6V
| Crystal structure of sulfotransferase STF9 from Mycobacterium avium | Descriptor: | PALMITIC ACID, Putative uncharacterized protein, SULFATE ION | Authors: | Hassain, M.M, Moriizumi, Y, Tanaka, S, Kimura, M, Kakuta, Y. | Deposit date: | 2007-08-09 | Release date: | 2008-09-09 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (2.6 Å) | Cite: | Crystal structure of sulfotransferase STF9 from Mycobacterium avium To be Published
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2Z7C
| Crystal structure of chromatin protein alba from hyperthermophilic archaeon pyrococcus horikoshii | Descriptor: | ARGININE, DNA/RNA-binding protein Alba | Authors: | Hada, K, Nakashima, T, Osawa, T, Shimada, H, Kakuta, Y, Kimura, M. | Deposit date: | 2007-08-17 | Release date: | 2008-08-05 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | Crystal structure and functional analysis of an archaeal chromatin protein Alba from the hyperthermophilic archaeon Pyrococcus horikoshii OT3. Biosci.Biotechnol.Biochem., 72, 2008
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2Z87
| Crystal structure of chondroitin polymerase from Escherichia coli strain K4 (K4CP) complexed with UDP-GalNAc and UDP | Descriptor: | Chondroitin synthase, MANGANESE (II) ION, URIDINE-5'-DIPHOSPHATE, ... | Authors: | Osawa, T, Sugiura, N, Shimada, H, Hirooka, R, Tsuji, A, Kimura, M, Kimata, K, Kakuta, Y. | Deposit date: | 2007-09-03 | Release date: | 2008-09-16 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (3 Å) | Cite: | Crystal structure of chondroitin polymerase from Escherichia coli K4. Biochem. Biophys. Res. Commun., 378, 2009
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2ZPO
| Crystal Structure of Green Turtle Egg White Ribonuclease | Descriptor: | GLYCEROL, Ribonuclease, SULFATE ION | Authors: | Katekaew, S, Kakuta, Y, Torikata, T, Kimura, M, Yoneda, K, Araki, T. | Deposit date: | 2008-07-25 | Release date: | 2008-08-19 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | Crystal Structure of Newly Found Green Turtle Egg White Ribonuclease To be Published
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2Z86
| Crystal structure of chondroitin polymerase from Escherichia coli strain K4 (K4CP) complexed with UDP-GlcUA and UDP | Descriptor: | Chondroitin synthase, MANGANESE (II) ION, URIDINE-5'-DIPHOSPHATE, ... | Authors: | Osawa, T, Sugiura, N, Shimada, H, Hirooka, R, Tsuji, A, Kimura, M, Kimata, K, Kakuta, Y. | Deposit date: | 2007-09-03 | Release date: | 2008-09-16 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Crystal structure of chondroitin polymerase from Escherichia coli K4. Biochem. Biophys. Res. Commun., 378, 2009
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2ZQ5
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3VKK
| Crystal Structure Of The Covalent Intermediate Of Human Cytosolic Beta-Glucosidase-mannose complex | Descriptor: | CHLORIDE ION, Cytosolic beta-glucosidase, GLYCEROL, ... | Authors: | Noguchi, J, Hayashi, Y, Okino, N, Ito, M, Kimura, M, Kakuta, Y. | Deposit date: | 2011-11-17 | Release date: | 2012-11-21 | Last modified: | 2020-07-29 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Structural basis for inhibition mechanism of human cytosolic beta-glucosidase by monnoside To be Published
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3VK9
| Crystal structure of delta-class glutathione transferase from silkmoth | Descriptor: | GLYCEROL, Glutathione S-transferase delta | Authors: | Kakuta, Y, Usuda, K, Higashiura, A, Suzuki, M, Nakagawa, A, Kimura, M, Yamamoto, K. | Deposit date: | 2011-11-10 | Release date: | 2012-10-03 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (2.001 Å) | Cite: | Structural basis for catalytic activity of a silkworm Delta-class glutathione transferase Biochim.Biophys.Acta, 1820, 2012
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3VVU
| Crystal structure of reconstructed bacterial ancestral NDK, Bac1 | Descriptor: | Nucleoside diphosphate kinase | Authors: | Nemoto, N, Miyazono, K, Kimura, M, Yokobori, S, Akanuma, S, Tanokura, M, Yamagishi, A. | Deposit date: | 2012-07-27 | Release date: | 2013-06-19 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Experimental evidence for the thermophilicity of ancestral life Proc.Natl.Acad.Sci.USA, 110, 2013
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3VVT
| Crystal structure of reconstructed archaeal ancestral NDK, Arc1 | Descriptor: | Nucleoside diphosphate kinase | Authors: | Nemoto, N, Miyazono, K, Kimura, M, Yokobori, S, Akanuma, S, Tanokura, M, Yamagishi, A. | Deposit date: | 2012-07-27 | Release date: | 2013-06-19 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Experimental evidence for the thermophilicity of ancestral life Proc.Natl.Acad.Sci.USA, 110, 2013
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5XTM
| Crystal structure of PhoRpp38 bound to a K-turn in P12.2 helix | Descriptor: | 50S ribosomal protein L7Ae, MAGNESIUM ION, RNA (47-MER) | Authors: | Oshima, K, Kimura, M. | Deposit date: | 2017-06-20 | Release date: | 2018-02-07 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Crystal structures of the archaeal RNase P protein Rpp38 in complex with RNA fragments containing a K-turn motif. Acta Crystallogr F Struct Biol Commun, 74, 2018
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5Y7M
| Crystal structure of PhoRpp38 bound to a K-turn in P12.1 helix | Descriptor: | 50S ribosomal protein L7Ae, GUANOSINE-5'-TRIPHOSPHATE, RNA (52-MER), ... | Authors: | Oshima, K, Kimura, M. | Deposit date: | 2017-08-01 | Release date: | 2018-02-07 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (3.1 Å) | Cite: | Crystal structures of the archaeal RNase P protein Rpp38 in complex with RNA fragments containing a K-turn motif. Acta Crystallogr F Struct Biol Commun, 74, 2018
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3VU2
| Structure of the Starch Branching Enzyme I (BEI) complexed with maltopentaose from Oryza sativa L | Descriptor: | 1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic, GLYCEROL, ... | Authors: | Chaen, K, Kakuta, Y, Kimura, M. | Deposit date: | 2012-06-14 | Release date: | 2013-05-08 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (2.23 Å) | Cite: | Crystal structure of the rice branching enzyme I (BEI) in complex with maltopentaose. Biochem.Biophys.Res.Commun., 424, 2012
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3WZ0
| On archaeal homologs of the human RNase P proteins Pop5 and Rpp30 in the hyperthermophilic archaeon Thermococcus kodakarensis | Descriptor: | Ribonuclease P protein component 2, Ribonuclease P protein component 3 | Authors: | Suematsu, K, Ueda, T, Nakashima, T, Kakuta, Y, Kimura, M. | Deposit date: | 2014-09-11 | Release date: | 2015-09-16 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (2.79 Å) | Cite: | On archaeal homologs of the human RNase P proteins Pop5 and Rpp30 in the hyperthermophilic archaeon Thermococcus kodakarensis. Biosci.Biotechnol.Biochem., 79, 2015
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3WYZ
| On archaeal homologs of the human RNase P protein Rpp30 in the hyperthermophilic archaeon Thermococcus kodakarensis | Descriptor: | GLYCEROL, Ribonuclease P protein component 3 | Authors: | Suematsu, K, Ueda, T, Nakashima, T, Kakuta, Y, Kimura, M. | Deposit date: | 2014-09-11 | Release date: | 2015-09-16 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (2.21 Å) | Cite: | On archaeal homologs of the human RNase P proteins Pop5 and Rpp30 in the hyperthermophilic archaeon Thermococcus kodakarensis. Biosci.Biotechnol.Biochem., 79, 2015
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1BK7
| RIBONUCLEASE MC1 FROM THE SEEDS OF BITTER GOURD | Descriptor: | PROTEIN (RIBONUCLEASE MC1) | Authors: | Nakagawa, A, Tanaka, I. | Deposit date: | 1998-07-15 | Release date: | 1999-07-23 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.75 Å) | Cite: | Crystal structure of a ribonuclease from the seeds of bitter gourd (Momordica charantia) at 1.75 A resolution. Biochim.Biophys.Acta, 1433, 1999
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1RL2
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487D
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5B86
| Crystal structure of M-Sec | Descriptor: | Tumor necrosis factor alpha-induced protein 2 | Authors: | Yamashita, M, Sato, Y, Yamagata, A, Fukai, S. | Deposit date: | 2016-06-12 | Release date: | 2016-10-12 | Last modified: | 2020-02-26 | Method: | X-RAY DIFFRACTION (3.017 Å) | Cite: | Distinct Roles for the N- and C-terminal Regions of M-Sec in Plasma Membrane Deformation during Tunneling Nanotube Formation. Sci Rep, 6, 2016
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2FR6
| Crystal Structure of Mouse Cytidine Deaminase Complexed with Cytidine | Descriptor: | 4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE, AMMONIA, Cytidine deaminase, ... | Authors: | Teh, A.H. | Deposit date: | 2006-01-19 | Release date: | 2006-07-11 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.07 Å) | Cite: | The 1.48 A Resolution Crystal Structure of the Homotetrameric Cytidine Deaminase from Mouse Biochemistry, 45, 2006
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2FR5
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1HUS
| RIBOSOMAL PROTEIN S7 | Descriptor: | RIBOSOMAL PROTEIN S7 | Authors: | Hosaka, H, Nakagawa, A, Tanaka, I. | Deposit date: | 1997-08-08 | Release date: | 1998-01-28 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Ribosomal protein S7: a new RNA-binding motif with structural similarities to a DNA architectural factor. Structure, 5, 1997
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8JJE
| RBD of SARS-CoV2 spike protein with ACE2 decoy | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ... | Authors: | Kishikawa, J, Hirose, M, Kato, T, Okamoto, T. | Deposit date: | 2023-05-30 | Release date: | 2023-12-27 | Method: | ELECTRON MICROSCOPY (3.4 Å) | Cite: | An inhaled ACE2 decoy confers protection against SARS-CoV-2 infection in preclinical models. Sci Transl Med, 15, 2023
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5XH8
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1ZAB
| Crystal Structure of Mouse Cytidine Deaminase Complexed with 3-Deazauridine | Descriptor: | 1-((2R,3R,4S,5R)-TETRAHYDRO-3,4-DIHYDROXY-5-(HYDROXYMETHYL)FURAN-2-YL)PYRIDINE-2,4(1H,3H)-DIONE, Cytidine deaminase, SULFATE ION, ... | Authors: | Teh, A.H. | Deposit date: | 2005-04-06 | Release date: | 2006-04-11 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.36 Å) | Cite: | The 1.48 A Resolution Crystal Structure of the Homotetrameric Cytidine Deaminase from Mouse Biochemistry, 45, 2006
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