2Z2X
| Crystal structure of mature form of Tk-subtilisin | Descriptor: | CALCIUM ION, Tk-subtilisin | Authors: | Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | Deposit date: | 2007-05-29 | Release date: | 2007-12-04 | Last modified: | 2023-11-15 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Four new crystal structures of Tk-subtilisin in unautoprocessed, autoprocessed and mature forms: insight into structural changes during maturation J.Mol.Biol., 372, 2007
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2Z2Z
| Crystal structure of unautoprocessed form of Tk-subtilisin soaked by 10mM CaCl2 | Descriptor: | CALCIUM ION, Tk-subtilisin precursor | Authors: | Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | Deposit date: | 2007-05-29 | Release date: | 2007-12-04 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.87 Å) | Cite: | Four new crystal structures of Tk-subtilisin in unautoprocessed, autoprocessed and mature forms: insight into structural changes during maturation J.Mol.Biol., 372, 2007
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2Z2Y
| Crystal structure of autoprocessed form of Tk-subtilisin | Descriptor: | CALCIUM ION, Tk-subtilisin, ZINC ION | Authors: | Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | Deposit date: | 2007-05-29 | Release date: | 2007-12-04 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.89 Å) | Cite: | Four new crystal structures of Tk-subtilisin in unautoprocessed, autoprocessed and mature forms: insight into structural changes during maturation J.Mol.Biol., 372, 2007
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2ZRQ
| Crystal structure of S324A-subtilisin | Descriptor: | CALCIUM ION, Tk-subtilisin | Authors: | Tanaka, S, Takeuchi, Y, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | Deposit date: | 2008-08-28 | Release date: | 2009-03-03 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.16 Å) | Cite: | Crystal structure of Tk-subtilisin folded without propeptide: requirement of propeptide for acceleration of folding Febs Lett., 582, 2008
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3A3O
| Crystal structure of complex between SA-subtilisin and Tk-propeptide with deletion of the five C-terminal residues | Descriptor: | CALCIUM ION, Tk-subtilisin, ZINC ION | Authors: | Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | Deposit date: | 2009-06-15 | Release date: | 2009-08-18 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Identification of the interactions critical for propeptide-catalyzed folding of Tk-subtilisin J.Mol.Biol., 394, 2009
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3A3N
| Crystal structure of complex between SA-subtilisin and Tk-propeptide with deletion of the two C-terminal residues | Descriptor: | CALCIUM ION, Tk-subtilisin, ZINC ION | Authors: | Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | Deposit date: | 2009-06-15 | Release date: | 2009-08-18 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Identification of the interactions critical for propeptide-catalyzed folding of Tk-subtilisin J.Mol.Biol., 394, 2009
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2YV0
| Structural and Thermodynamic Analyses of E. coli ribonuclease HI Variant with Quintuple Thermostabilizing Mutations | Descriptor: | Ribonuclease HI | Authors: | Haruki, M, Motegi, T, Tadokoro, T, Koga, Y, Takano, K, Kanaya, S. | Deposit date: | 2007-04-06 | Release date: | 2008-03-18 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (1.4 Å) | Cite: | Structural and thermodynamic analyses of Escherichia coli RNase HI variant with quintuple thermostabilizing mutations. Febs J., 274, 2007
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3AIM
| R267E mutant of a HSL-like carboxylesterase from Sulfolobus tokodaii | Descriptor: | (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 303aa long hypothetical esterase, ... | Authors: | Angkawidjaja, C, Kanaya, S. | Deposit date: | 2010-05-16 | Release date: | 2011-06-08 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Structure and stability of a thermostable carboxylesterase from the thermoacidophilic archaeon Sulfolobustokodaii Febs J., 279, 2012
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3A6Z
| Crystal structure of Pseudomonas sp. MIS38 lipase (PML) in the open conformation following dialysis against Ca-free buffer | Descriptor: | CALCIUM ION, Lipase | Authors: | Angkawidjaja, C, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | Deposit date: | 2009-09-10 | Release date: | 2010-05-26 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.15 Å) | Cite: | X-ray Crystallographic and MD Simulation Studies on the Mechanism of Interfacial Activation of a Family I.3 Lipase with Two Lids J.Mol.Biol., 2010
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3AIL
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3AIK
| Crystal structure of a HSL-like carboxylesterase from Sulfolobus tokodaii | Descriptor: | (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 303aa long hypothetical esterase, ... | Authors: | Angkawidjaja, C, Kanaya, S. | Deposit date: | 2010-05-16 | Release date: | 2011-06-08 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.95 Å) | Cite: | Structure and stability of a thermostable carboxylesterase from the thermoacidophilic archaeon Sulfolobustokodaii Febs J., 279, 2012
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3AIN
| R267G mutant of a HSL-like carboxylesterase from Sulfolobus tokodaii | Descriptor: | (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 303aa long hypothetical esterase, ... | Authors: | Angkawidjaja, C, Kanaya, S. | Deposit date: | 2010-05-16 | Release date: | 2011-06-08 | Last modified: | 2012-09-05 | Method: | X-RAY DIFFRACTION (1.65 Å) | Cite: | Structure and stability of a thermostable carboxylesterase from the thermoacidophilic archaeon Sulfolobustokodaii Febs J., 279, 2012
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3AIO
| R267K mutant of a HSL-like carboxylesterase from Sulfolobus tokodaii | Descriptor: | (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 303aa long hypothetical esterase, ... | Authors: | Angkawidjaja, C, Kanaya, S. | Deposit date: | 2010-05-16 | Release date: | 2011-06-08 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Structure and stability of a thermostable carboxylesterase from the thermoacidophilic archaeon Sulfolobustokodaii Febs J., 279, 2012
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3AUK
| Crystal structure of a lipase from Geobacillus sp. SBS-4S | Descriptor: | CALCIUM ION, CHLORIDE ION, Lipase, ... | Authors: | Angkawidjaja, C, Tayyab, M, Rashid, N, Kanaya, S. | Deposit date: | 2011-02-08 | Release date: | 2012-02-08 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.66 Å) | Cite: | Crystal structure of a lipase from Geobacillus sp. SBS-4S TO BE PUBLISHED
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3B09
| Crystal structure of the N-domain of FKBP22 from Shewanella sp. SIB1 | Descriptor: | Peptidyl-prolyl cis-trans isomerase | Authors: | Budiman, C, Angkawidjaja, C, Motoike, H, Koga, Y, Takano, K, Kanaya, S. | Deposit date: | 2011-06-07 | Release date: | 2012-04-18 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Crystal structure of N-domain of FKBP22 from Shewanella sp. SIB1: dimer dissociation by disruption of Val-Leu knot Protein Sci., 20, 2011
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2E1P
| Crystal structure of pro-Tk-subtilisin | Descriptor: | CALCIUM ION, Tk-subtilisin | Authors: | Tanaka, S, Saito, K, Chon, H, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | Deposit date: | 2006-10-27 | Release date: | 2007-01-16 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Crystal structure of unautoprocessed precursor of subtilisin from a hyperthermophilic archaeon: evidence for Ca2+-induced folding J.Biol.Chem., 282, 2007
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1WSF
| Co-crystal structure of E.coli RNase HI active site mutant (D134A*) with Mn2+ | Descriptor: | MANGANESE (II) ION, Ribonuclease HI | Authors: | Tsunaka, Y, Takano, K, Matsumura, H, Yamagata, Y, Kanaya, S. | Deposit date: | 2004-11-05 | Release date: | 2005-02-08 | Last modified: | 2021-11-10 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Identification of Single Mn(2+) Binding Sites Required for Activation of the Mutant Proteins of E.coli RNase HI at Glu48 and/or Asp134 by X-ray Crystallography J.Mol.Biol., 345, 2005
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1X0M
| a Human Kynurenine Aminotransferase II Homologue from Pyrococcus horikoshii OT3 | Descriptor: | Aminotransferase II Homologue | Authors: | Chon, H, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | Deposit date: | 2005-03-24 | Release date: | 2005-04-12 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Crystal structure of a human kynurenine aminotransferase II homologue from Pyrococcus horikoshii OT3 at 2.20 A resolution Proteins, 61, 2005
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1WSE
| Co-crystal structure of E.coli RNase HI active site mutant (E48A*) with Mn2+ | Descriptor: | MANGANESE (II) ION, Ribonuclease HI | Authors: | Tsunaka, Y, Takano, K, Matsumura, H, Yamagata, Y, Kanaya, S. | Deposit date: | 2004-11-05 | Release date: | 2005-02-08 | Last modified: | 2021-11-10 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Identification of Single Mn(2+) Binding Sites Required for Activation of the Mutant Proteins of E.coli RNase HI at Glu48 and/or Asp134 by X-ray Crystallography J.Mol.Biol., 345, 2005
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1WSG
| Co-crystal structure of E.coli RNase HI active site mutant (E48A/D134N*) with Mn2+ | Descriptor: | MANGANESE (II) ION, Ribonuclease HI | Authors: | Tsunaka, Y, Takano, K, Matsumura, H, Yamagata, Y, Kanaya, S. | Deposit date: | 2004-11-05 | Release date: | 2005-02-08 | Last modified: | 2021-11-10 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Identification of Single Mn(2+) Binding Sites Required for Activation of the Mutant Proteins of E.coli RNase HI at Glu48 and/or Asp134 by X-ray Crystallography J.Mol.Biol., 345, 2005
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2Z8Z
| Crystal structure of a platinum-bound S445C mutant of Pseudomonas sp. MIS38 lipase | Descriptor: | CALCIUM ION, Lipase, PLATINUM (II) ION, ... | Authors: | Angkawidjaja, C, You, D.J, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | Deposit date: | 2007-09-13 | Release date: | 2007-10-30 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Crystal structure of a family I.3 lipase from Pseudomonas sp. MIS38 in a closed conformation FEBS Lett., 581, 2007
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2ZJ6
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2Z8X
| Crystal structure of extracellular lipase from Pseudomonas sp. MIS38 | Descriptor: | CALCIUM ION, Lipase, ZINC ION | Authors: | Angkawidjaja, C, You, D.J, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | Deposit date: | 2007-09-11 | Release date: | 2007-10-30 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (1.48 Å) | Cite: | Crystal structure of a family I.3 lipase from Pseudomonas sp. MIS38 in a closed conformation FEBS Lett., 581, 2007
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2ZJ7
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2ZF5
| Crystal Structure of highly thermostable glycerol kinase from a hyperthermophilic archaeon | Descriptor: | Glycerol kinase | Authors: | Koga, Y, Katsumi, R, You, D.-J, Matsumura, H, Takano, K, Kanaya, S. | Deposit date: | 2007-12-20 | Release date: | 2008-05-06 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Crystal structure of highly thermostable glycerol kinase from a hyperthermophilic archaeon in a dimeric form Febs J., 275, 2008
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