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1HCR
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BU of 1hcr by Molmil
HIN RECOMBINASE BOUND TO DNA: THE ORIGIN OF SPECIFICITY IN MAJOR AND MINOR GROOVE INTERACTIONS
分子名称: DNA (5'-D(*TP*CP*TP*TP*AP*TP*CP*AP*AP*AP*AP*AP*C)-3'), DNA (5'-D(*TP*GP*TP*TP*TP*TP*TP*GP*AP*TP*AP*AP*GP*A)-3'), PROTEIN (HIN RECOMBINASE)
著者Feng, J.-A, Johnson, R.C, Dickerson, R.E.
登録日1993-12-17
公開日1994-04-30
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Hin recombinase bound to DNA: the origin of specificity in major and minor groove interactions.
Science, 263, 1994
1TGH
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BU of 1tgh by Molmil
TATA BINDING PROTEIN (TBP)/DNA COMPLEX
分子名称: DNA (5'-D(*CP*GP*TP*AP*TP*AP*TP*AP*TP*AP*CP*G)-3'), PROTEIN (TATA BINDING PROTEIN (TBP))
著者Juo, Z.S, Dickerson, R.E.
登録日1996-02-13
公開日1996-08-01
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献How proteins recognize the TATA box.
J.Mol.Biol., 261, 1996
1IJW
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BU of 1ijw by Molmil
Testing the Water-Mediated Hin Recombinase DNA Recognition by Systematic Mutations.
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5'-D(*AP*TP*(CBR)P*TP*TP*AP*TP*CP*AP*AP*AP*AP*AP*C)-3', 5'-D(*TP*GP*TP*TP*TP*TP*TP*GP*AP*TP*AP*AP*GP*A)-3', ...
著者Chiu, T.K, Sohn, C, Johnson, R.C, Dickerson, R.E.
登録日2001-04-30
公開日2002-02-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Testing water-mediated DNA recognition by the Hin recombinase.
EMBO J., 21, 2002
1JJ8
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BU of 1jj8 by Molmil
Testing the Water-Mediated HIN Recombinase DNA Recognition by Systematic Mutations
分子名称: 5'-D(*AP*TP*CP*TP*TP*AP*TP*CP*AP*AP*AP*AP*AP*C)-3', 5'-D(*TP*GP*(5IT)P*TP*TP*TP*TP*GP*AP*TP*AP*AP*GP*A)-3', DNA-INVERTASE HIN
著者Chiu, T.K, Sohn, C, Johnson, R.C, Dickerson, R.E.
登録日2001-07-03
公開日2002-02-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Testing water-mediated DNA recognition by the Hin recombinase.
EMBO J., 21, 2002
1JJ6
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BU of 1jj6 by Molmil
Testing the Water-Mediated Hin Recombinase DNA Recognition by Systematic Mutations.
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5'-D(*AP*TP*CP*TP*TP*AP*TP*CP*AP*AP*AP*AP*AP*C)-3', 5'-D(*TP*GP*TP*(5IT)P*TP*TP*TP*GP*AP*TP*AP*AP*GP*A)-3', ...
著者Chiu, T.K, Sohn, C, Johnson, R.C, Dickerson, R.E.
登録日2001-07-03
公開日2002-02-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Testing water-mediated DNA recognition by the Hin recombinase.
EMBO J., 21, 2002
1JKO
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BU of 1jko by Molmil
Testing the Water-Mediated HIN Recombinase DNA Recognition by Systematic Mutations
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5'-D(*AP*TP*CP*TP*TP*AP*CP*CP*AP*AP*AP*AP*AP*C)-3', 5'-D(*TP*GP*TP*TP*TP*TP*TP*GP*GP*TP*AP*AP*GP*A)-3', ...
著者Chiu, T.K, Sohn, C, Johnson, R.C, Dickerson, R.E.
登録日2001-07-12
公開日2002-02-22
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Testing water-mediated DNA recognition by the Hin recombinase.
EMBO J., 21, 2002
1JKR
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BU of 1jkr by Molmil
Testing the Water-Mediated HIN Recombinase DNA Recognition by Systematic Mutations
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5'-D(*AP*TP*CP*TP*TP*GP*TP*CP*AP*AP*AP*AP*AP*C)-3', 5'-D(*TP*GP*TP*TP*TP*TP*TP*GP*AP*CP*AP*AP*GP*A)-3', ...
著者Chiu, T.K, Sohn, C, Johnson, R.C, Dickerson, R.E.
登録日2001-07-13
公開日2002-02-22
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Testing water-mediated DNA recognition by the Hin recombinase.
EMBO J., 21, 2002
1JKP
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BU of 1jkp by Molmil
Testing the Water-Mediated HIN Recombinase DNA Recognition by Systematic Mutations
分子名称: 5'-D(*AP*TP*CP*TP*TP*CP*TP*CP*AP*AP*AP*AP*AP*C)-3', 5'-D(*TP*GP*TP*TP*TP*TP*TP*GP*AP*GP*AP*AP*GP*A)-3', DNA-INVERTASE HIN
著者Chiu, T.K, Sohn, C, Johnson, R.C, Dickerson, R.E.
登録日2001-07-13
公開日2002-02-22
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Testing water-mediated DNA recognition by the Hin recombinase.
EMBO J., 21, 2002
1JKQ
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BU of 1jkq by Molmil
Testing the Water-Mediated HIN Recombinase DNA Recognition by Systematic Mutations
分子名称: 5'-D(*AP*TP*CP*TP*TP*AP*TP*AP*AP*AP*AP*AP*AP*C)-3', 5'-D(*TP*GP*TP*TP*TP*TP*TP*TP*AP*TP*AP*AP*GP*A)-3', DNA-INVERTASE HIN
著者Chiu, T.K, Sohn, C, Johnson, R.C, Dickerson, R.E.
登録日2001-07-13
公開日2002-02-22
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.86 Å)
主引用文献Testing water-mediated DNA recognition by the Hin recombinase.
EMBO J., 21, 2002
1D16
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BU of 1d16 by Molmil
STRUCTURE OF A T4 HAIRPIN LOOP ON A Z-DNA STEM AND COMPARISON WITH A-RNA AND B-DNA LOOPS
分子名称: DNA (5'-D(*CP*GP*CP*GP*CP*GP*TP*TP*TP*TP*CP*GP*CP*GP*CP*G)-3')
著者Chattopadhyaya, R, Grzeskowiak, K, Dickerson, R.E.
登録日1988-04-12
公開日1989-01-09
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of a T4 hairpin loop on a Z-DNA stem and comparison with A-RNA and B-DNA loops.
J.Mol.Biol., 211, 1990
1D43
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BU of 1d43 by Molmil
DNA DODECAMER C-G-C-G-A-A-T-T-C-G-C-G/HOECHST 33258 COMPLEX: 0 DEGREES C, PIPERAZINE UP
分子名称: 2'-(4-HYDROXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLE, DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), MAGNESIUM ION
著者Quintana, J.R, Lipanov, A.A, Dickerson, R.E.
登録日1991-06-04
公開日1992-04-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Low-temperature crystallographic analyses of the binding of Hoechst 33258 to the double-helical DNA dodecamer C-G-C-G-A-A-T-T-C-G-C-G.
Biochemistry, 30, 1991
1D49
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BU of 1d49 by Molmil
THE STRUCTURE OF A B-DNA DECAMER WITH A CENTRAL T-A STEP: C-G-A-T-T-A-A-T-C-G
分子名称: DNA (5'-D(*CP*GP*AP*TP*TP*AP*AP*TP*CP*G)-3'), MAGNESIUM ION
著者Quintana, J.R, Grzeskowiak, K, Yanagi, K, Dickerson, R.E.
登録日1991-09-17
公開日1992-04-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure of a B-DNA decamer with a central T-A step: C-G-A-T-T-A-A-T-C-G.
J.Mol.Biol., 225, 1992
1D62
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BU of 1d62 by Molmil
THE STRUCTURE OF A /B-DNA$ DECAMER WITH AN I(SLASH)*A MISMATCH AND COMPARISON WITH THE G(SLASH)*A MISMATCH
分子名称: 5'-D(*CP*CP*AP*AP*IP*AP*TP*TP*GP*G)-3'
著者Lipanov, A, Kopka, M.L, Kaczor-Grzeskowiak, M, Dickerson, R.E.
登録日1992-03-01
公開日1993-07-15
最終更新日2023-07-26
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of the B-DNA decamer C-C-A-A-C-I-T-T-G-G in two different space groups: conformational flexibility of B-DNA.
Biochemistry, 32, 1993
1D56
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BU of 1d56 by Molmil
ALTERNATIVE STRUCTURES FOR ALTERNATING POLY(DA-DT) TRACTS: THE STRUCTURE OF THE B-DNA DECAMER C-G-A-T-A-T-A-T-C-G
分子名称: CALCIUM ION, DNA (5'-D(*CP*GP*AP*TP*AP*TP*AP*TP*CP*G)-3')
著者Yuan, H, Quintana, J, Dickerson, R.E.
登録日1992-02-19
公開日1992-09-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Alternative structures for alternating poly(dA-dT) tracts: the structure of the B-DNA decamer C-G-A-T-A-T-A-T-C-G.
Biochemistry, 31, 1992
1D57
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BU of 1d57 by Molmil
ALTERNATIVE STRUCTURES FOR ALTERNATING POLY(DA-DT) TRACTS: THE STRUCTURE OF THE B-DNA DECAMER C-G-A-T-A-T-A-T-C-G
分子名称: DNA (5'-D(*CP*GP*AP*TP*AP*TP*AP*TP*CP*G)-3'), MAGNESIUM ION
著者Yuan, H, Quintana, J, Dickerson, R.E.
登録日1992-02-19
公開日1992-09-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Alternative structures for alternating poly(dA-dT) tracts: the structure of the B-DNA decamer C-G-A-T-A-T-A-T-C-G.
Biochemistry, 31, 1992
1D44
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BU of 1d44 by Molmil
DNA DODECAMER C-G-C-G-A-A-T-T-C-G-C-G/HOECHST 33258 COMPLEX: 0 DEGREES C, PIPERAZINE DOWN
分子名称: 2'-(4-HYDROXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLE, DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), MAGNESIUM ION
著者Quintana, J.R, Lipanov, A.A, Dickerson, R.E.
登録日1991-06-04
公開日1992-04-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Low-temperature crystallographic analyses of the binding of Hoechst 33258 to the double-helical DNA dodecamer C-G-C-G-A-A-T-T-C-G-C-G.
Biochemistry, 30, 1991
1D61
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BU of 1d61 by Molmil
THE STRUCTURE OF THE B-DNA DECAMER C-C-A-A-C-I-T-T-G-G: MONOCLINIC FORM
分子名称: CACODYLATE ION, CALCIUM ION, DNA (5'-D(*CP*CP*AP*AP*CP*IP*TP*TP*GP*G)-3')
著者Lipanov, A, Kopka, M.L, Kaczor-Grzeskowiak, M, Quintana, J, Dickerson, R.E.
登録日1992-02-26
公開日1993-04-15
最終更新日2023-07-26
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structure of the B-DNA decamer C-C-A-A-C-I-T-T-G-G in two different space groups: conformational flexibility of B-DNA.
Biochemistry, 32, 1993
1D45
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BU of 1d45 by Molmil
DNA DODECAMER C-G-C-G-A-A-T-T-C-G-C-G/HOECHST 33258 COMPLEX:-25 DEGREES C, PIPERAZINE DOWN
分子名称: 2'-(4-HYDROXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLE, DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), MAGNESIUM ION
著者Quintana, J.R, Lipanov, A.A, Dickerson, R.E.
登録日1991-06-04
公開日1992-04-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Low-temperature crystallographic analyses of the binding of Hoechst 33258 to the double-helical DNA dodecamer C-G-C-G-A-A-T-T-C-G-C-G.
Biochemistry, 30, 1991
1D46
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BU of 1d46 by Molmil
DNA DODECAMER C-G-C-G-A-A-T-T-C-G-C-G/HOECHST 33258 COMPLEX:-100 DEGREES C, PIPERAZINE DOWN
分子名称: 2'-(4-HYDROXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLE, DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), MAGNESIUM ION
著者Quintana, J.R, Lipanov, A.A, Dickerson, R.E.
登録日1991-06-04
公開日1992-04-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Low-temperature crystallographic analyses of the binding of Hoechst 33258 to the double-helical DNA dodecamer C-G-C-G-A-A-T-T-C-G-C-G.
Biochemistry, 30, 1991
1LEY
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BU of 1ley by Molmil
STRUCTURE OF A DICATIONIC MONOIMIDAZOLE LEXITROPSIN BOUND TO DNA (ORIENTATION 2)
分子名称: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), MONOIMIDAZOLE LEXITROPSIN
著者Goodsell, D.S, Ng, H.L, Kopka, M.L, Lown, J.W, Dickerson, R.E.
登録日1995-10-10
公開日1996-04-03
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure of a dicationic monoimidazole lexitropsin bound to DNA.
Biochemistry, 34, 1995
1LEX
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BU of 1lex by Molmil
STRUCTURE OF A DICATIONIC MONOIMIDAZOLE LEXITROPSIN BOUND TO DNA (ORIENTATION 1)
分子名称: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), MONOIMIDAZOLE LEXITROPSIN
著者Goodsell, D.S, Ng, H.L, Kopka, M.L, Lown, J.W, Dickerson, R.E.
登録日1995-10-10
公開日1996-04-03
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure of a dicationic monoimidazole lexitropsin bound to DNA.
Biochemistry, 34, 1995
274D
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BU of 274d by Molmil
CRYSTAL STRUCTURE OF A COVALENT DNA-DRUG ADDUCT: ANTHRAMYCIN BOUND TO C-C-A-A-C-G-T-T-G-G, AND A MOLECULAR EXPLANATION OF SPECIFICITY
分子名称: ANTHRAMYCIN, DNA (5'-D(*CP*CP*AP*AP*CP*GP*TP*TP*(DRUG)GP*G)-3')
著者Kopka, M.L, Goodsell, D.S, Baikalov, I, Grzeskowiak, K, Cascio, D, Dickerson, R.E.
登録日1994-04-28
公開日1994-10-21
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of a covalent DNA-drug adduct: anthramycin bound to C-C-A-A-C-G-T-T-G-G and a molecular explanation of specificity.
Biochemistry, 33, 1994
101D
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BU of 101d by Molmil
REFINEMENT OF NETROPSIN BOUND TO DNA: BIAS AND FEEDBACK IN ELECTRON DENSITY MAP INTERPRETATION
分子名称: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(CBR)P*GP*CP*G)-3'), MAGNESIUM ION, NETROPSIN
著者Goodsell, D.S, Kopka, M.L, Dickerson, R.E.
登録日1994-12-14
公開日1995-02-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Refinement of netropsin bound to DNA: bias and feedback in electron density map interpretation.
Biochemistry, 34, 1995
1A04
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BU of 1a04 by Molmil
THE STRUCTURE OF THE NITRATE/NITRITE RESPONSE REGULATOR PROTEIN NARL IN THE MONOCLINIC C2 CRYSTAL FORM
分子名称: NITRATE/NITRITE RESPONSE REGULATOR PROTEIN NARL
著者Baikalov, I, Schroder, I, Kaczor-Grzeskowiak, M, Cascio, D, Gunsalus, R.P, Dickerson, R.E.
登録日1997-12-08
公開日1998-03-18
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献NarL dimerization? Suggestive evidence from a new crystal form
Biochemistry, 37, 1998
1DA3
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BU of 1da3 by Molmil
THE CRYSTAL STRUCTURE OF THE TRIGONAL DECAMER C-G-A-T-C-G-6MEA-T-C-G: A B-DNA HELIX WITH 10.6 BASE-PAIRS PER TURN
分子名称: CHLORIDE ION, DNA (5'-D(*CP*GP*AP*TP*CP*GP*(6MA)P*TP*CP*G)-3'), MAGNESIUM ION
著者Baikalov, I, Grzeskowiak, K, Yanagi, K, Quintana, J, Dickerson, R.E.
登録日1992-11-09
公開日1993-04-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The crystal structure of the trigonal decamer C-G-A-T-C-G-6meA-T-C-G: a B-DNA helix with 10.6 base-pairs per turn.
J.Mol.Biol., 231, 1993

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