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4ZVH
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BU of 4zvh by Molmil
Crystal structure of GGDEF domain of the E. coli DosC - form IV
Descriptor: Diguanylate cyclase DosC, SULFATE ION
Authors:Tarnawski, M, Barends, T.R.M, Schlichting, I.
Deposit date:2015-05-18
Release date:2015-11-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.301 Å)
Cite:Structural analysis of an oxygen-regulated diguanylate cyclase.
Acta Crystallogr.,Sect.D, 71, 2015
2GGE
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BU of 2gge by Molmil
Crystal Structure of Mandelate Racemase/Muconate Lactonizing Enzyme from Bacillus Subtilis complexed with MG++ at 1.8 A
Descriptor: CHLORIDE ION, MAGNESIUM ION, yitF
Authors:Malashkevich, V.N, Sauder, J.M, Schwinn, K.D, Emtage, S, Thompson, D.A, Rutter, M.E, Dickey, M, Groshong, C, Bain, K.T, Adams, J.M, Reyes, C, Rooney, I, Powell, A, Boice, A, Gheyi, T, Ozyurt, S, Atwell, S, Wasserman, S.R, Burley, S.K, Sali, A, Babbitt, P, Pieper, U, Gerlt, J.A, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2006-03-23
Release date:2006-04-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Crystal Structure of Mandelate Racemase/Muconate Lactonizing Enzyme from Bacillus Subtilis complexed with MG++ at 1.8 A
To be Published
5I6E
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BU of 5i6e by Molmil
Crystal structure of the central domain of yeast acetyl-CoA carboxylase
Descriptor: Acetyl-CoA carboxylase, MALONATE ION
Authors:Hunkeler, M, Stuttfeld, E, Hagmann, A, Imseng, S, Maier, T.
Deposit date:2016-02-16
Release date:2016-04-20
Last modified:2016-04-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:The dynamic organization of fungal acetyl-CoA carboxylase.
Nat Commun, 7, 2016
3MAE
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BU of 3mae by Molmil
CRYSTAL STRUCTURE OF PROBABLE DIHYDROLIPOAMIDE ACETYLTRANSFERASE FROM LISTERIA MONOCYTOGENES 4b F2365
Descriptor: 2-oxoisovalerate dehydrogenase E2 component, dihydrolipoamide acetyltransferase, CHLORIDE ION, ...
Authors:Patskovsky, Y, Toro, R, Gilmore, M, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-03-23
Release date:2010-04-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:CRYSTAL STRUCTURE OF A CATALYTIC DOMAIN OF DIHYDROLIPOAMIDE ACETYLTRANSFERASE FROM LISTERIA MONOCYTOGENES 4b F2365
To be Published
3VC2
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BU of 3vc2 by Molmil
Crystal structure of geranyl diphosphate C-methyltransferase from Streptomyces coelicolor A3(2) in complex with Mg2+, geranyl diphosphate, and S-adenosyl-L-homocysteine
Descriptor: GERANYL DIPHOSPHATE, Geranyl diphosphate 2-C-methyltransferase, MAGNESIUM ION, ...
Authors:Koksal, M, Christianson, D.W.
Deposit date:2012-01-03
Release date:2012-04-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.046 Å)
Cite:Structure of Geranyl Diphosphate C-Methyltransferase from Streptomyces coelicolor and Implications for the Mechanism of Isoprenoid Modification.
Biochemistry, 51, 2012
3VM0
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BU of 3vm0 by Molmil
Assimilatory nitrite reductase (Nii3) - N226K mutant - NO2 complex from tobacco leaf
Descriptor: CHLORIDE ION, IRON/SULFUR CLUSTER, NITRITE ION, ...
Authors:Nakano, S, Takahashi, M, Sakamoto, A, Morikawa, H, Katayanagi, K.
Deposit date:2011-12-05
Release date:2012-09-26
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.695 Å)
Cite:X-ray crystal structure of a mutant assimilatory nitrite reductase that shows sulfite reductase-like activity
Chem.Biodivers., 9, 2012
5I36
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BU of 5i36 by Molmil
Crystal structure of color device state A
Descriptor: DNA (26-MER), DNA (5'-D(*AP*CP*AP*GP*TP*CP*GP*TP*GP*GP*TP*AP*TP*C)-3'), DNA (5'-D(*CP*AP*GP*AP*TP*AP*CP*CP*TP*GP*AP*TP*CP*GP*GP*AP*CP*TP*AP*CP*G)-3'), ...
Authors:Hao, Y, Kristiansen, M, Sha, R, Birktoft, J, Mao, C, Seeman, N.C.
Deposit date:2016-02-09
Release date:2017-01-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (5.123 Å)
Cite:A device that operates within a self-assembled 3D DNA crystal.
Nat Chem, 9, 2017
3MBV
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BU of 3mbv by Molmil
Structure of bacterirhodopsin crystallized in betta-XylOC(16+4) meso phase
Descriptor: (3R,7R,11R)-3,7,11,15-tetramethylhexadecyl alpha-D-ribopyranoside, Bacteriorhodopsin, RETINAL
Authors:Borshchevskiy, V, Moiseeva, E, Kuklin, A, Bueldt, G, Hato, M, Gordeliy, V.
Deposit date:2010-03-26
Release date:2010-11-03
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Isoprenoid-chained lipid beta-XylOC16+4 A novel molecule for in meso membrane protein crystallization
J.Cryst.Growth, 312, 2010
2GEF
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BU of 2gef by Molmil
Crystal structure of a Novel viral protease with a serine/lysine catalytic dyad mechanism
Descriptor: Protease VP4
Authors:Paetzel, M, Feldman, A.R, Lee, J, Delmas, B.
Deposit date:2006-03-20
Release date:2006-05-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of a novel viral protease with a serine/lysine catalytic dyad mechanism
J.Mol.Biol., 358, 2006
4ZU7
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BU of 4zu7 by Molmil
X-ray structure if the QdtA 3,4-ketoisomerase from Thermoanaerobacterium thermosaccharolyticum, double mutant Y17R/R97H, in complex with TDP
Descriptor: (2S)-1-[3-{[(2R)-2-hydroxypropyl]oxy}-2,2-bis({[(2R)-2-hydroxypropyl]oxy}methyl)propoxy]propan-2-ol, QdtA, THYMIDINE-5'-DIPHOSPHATE
Authors:Thoden, J.B, Vinogradov, E, Gilbert, M, Salinger, A.J, Holden, H.M.
Deposit date:2015-05-15
Release date:2015-07-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Bacterial Sugar 3,4-Ketoisomerases: Structural Insight into Product Stereochemistry.
Biochemistry, 54, 2015
5A0R
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BU of 5a0r by Molmil
Product peptide-bound structure of metalloprotease Zmp1 variant E143A from Clostridium difficile
Descriptor: GLYCEROL, PRODUCT PEPTIDE, ZINC ION, ...
Authors:Schacherl, M, Pichlo, C, Neundorf, I, Baumann, U.
Deposit date:2015-04-22
Release date:2015-08-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.251 Å)
Cite:Structural Basis of Proline-Proline Peptide Bond Specificity of the Metalloprotease Zmp1 Implicated in Motility of Clostridium Difficile.
Structure, 23, 2015
3MD3
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BU of 3md3 by Molmil
Crystal Structure of the First Two RRM Domains of Yeast Poly(U) Binding Protein (Pub1)
Descriptor: GLYCEROL, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, SULFATE ION
Authors:Li, H, Shi, H, Zhu, Z, Wang, H, Niu, L, Teng, M.
Deposit date:2010-03-29
Release date:2010-05-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structure of the First Two RRM Domains of Yeast Poly(U) Binding Protein (Pub1)
To be published
3MDD
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BU of 3mdd by Molmil
CRYSTAL STRUCTURES OF MEDIUM CHAIN ACYL-COA DEHYDROGENASE FROM PIG LIVER MITOCHONDRIA WITH AND WITHOUT SUBSTRATE
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, MEDIUM CHAIN ACYL-COA DEHYDROGENASE
Authors:Kim, J.-J.P, Wang, M, Paschke, R.
Deposit date:1994-07-13
Release date:1994-09-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structures of medium-chain acyl-CoA dehydrogenase from pig liver mitochondria with and without substrate.
Proc.Natl.Acad.Sci.USA, 90, 1993
3VEJ
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BU of 3vej by Molmil
Crystal structure of the Get5 carboxyl domain from S. cerevisiae
Descriptor: PHOSPHATE ION, Ubiquitin-like protein MDY2
Authors:Chartron, J.W, Vandervelde, D.G, Rao, M, Clemons Jr, W.M.
Deposit date:2012-01-08
Release date:2012-01-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Get5 Carboxyl-terminal Domain Is a Novel Dimerization Motif That Tethers an Extended Get4/Get5 Complex.
J.Biol.Chem., 287, 2012
5A1W
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BU of 5a1w by Molmil
The structure of the COPI coat linkage II
Descriptor: ADP-RIBOSYLATION FACTOR 1, COATOMER SUBUNIT ALPHA, COATOMER SUBUNIT BETA, ...
Authors:Dodonova, S.O, Diestelkoetter-Bachert, P, von Appen, A, Hagen, W.J.H, Beck, R, Beck, M, Wieland, F, Briggs, J.A.G.
Deposit date:2015-05-06
Release date:2015-07-08
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (18 Å)
Cite:Vesicular Transport. A Structure of the Copi Coat and the Role of Coat Proteins in Membrane Vesicle Assembly.
Science, 349, 2015
5A3S
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BU of 5a3s by Molmil
Crystal structure of the (SR) Calcium ATPase E2-vanadate complex bound to thapsigargin and TNP-ATP
Descriptor: CHLORIDE ION, MAGNESIUM ION, OCTANOIC ACID [3S-[3ALPHA, ...
Authors:Clausen, J.D, Bublitz, M, Arnou, B, Olesen, C, Andersen, J.P, Moller, J.V, Nissen, P.
Deposit date:2015-06-03
Release date:2016-04-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal Structure of the Vanadate-Inhibited Ca(2+)-ATPase.
Structure, 24, 2016
4ZVE
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BU of 4zve by Molmil
Crystal structure of GGDEF domain of the E. coli DosC - form I (apo-form)
Descriptor: 1,2-ETHANEDIOL, CITRIC ACID, Diguanylate cyclase DosC
Authors:Tarnawski, M, Barends, T.R.M, Schlichting, I.
Deposit date:2015-05-18
Release date:2015-11-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural analysis of an oxygen-regulated diguanylate cyclase.
Acta Crystallogr.,Sect.D, 71, 2015
3VR0
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BU of 3vr0 by Molmil
Crystal structure of Pyrococcus furiosus PbaB, an archaeal proteasome activator
Descriptor: GOLD ION, Putative uncharacterized protein
Authors:Kumoi, K, Satoh, T, Hiromoto, T, Mizushima, T, Kamiya, Y, Noda, M, Uchiyama, S, Murata, K, Yagi, H, Kato, K.
Deposit date:2012-04-02
Release date:2013-04-03
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:An archaeal homolog of proteasome assembly factor functions as a proteasome activator
Plos One, 8, 2013
3MFQ
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BU of 3mfq by Molmil
A Glance into the Metal Binding Specificity of TroA: Where Elaborate Behaviors Occur in the Active Center
Descriptor: High-affinity zinc uptake system protein znuA, ZINC ION
Authors:Gao, G.F, Zheng, B, Zhang, Q, Gao, J, Han, H, Li, M.
Deposit date:2010-04-03
Release date:2011-04-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.598 Å)
Cite:Insight into the interaction of metal ions with TroA from Streptococcus suis
Plos One, 6, 2011
2G8F
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BU of 2g8f by Molmil
B. halodurans RNase H catalytic domain E188A mutant in complex with Mg2+ and RNA/DNA hybrid (non-P nick at the active site)
Descriptor: 5'-D(*AP*TP*GP*TP*CP*G)-3', 5'-R(*UP*CP*GP*AP*CP*A)-3', CHLORIDE ION, ...
Authors:Nowotny, M, Yang, W.
Deposit date:2006-03-02
Release date:2006-04-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Stepwise analyses of metal ions in RNase H catalysis from substrate destabilization to product release.
Embo J., 25, 2006
5A95
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BU of 5a95 by Molmil
Crystal structure of beta-glucanase SdGluc5_26A from Saccharophagus degradans in complex with tetrasaccharide A, form 2
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Sulzenbacher, G, Lafond, M, Freyd, T, Henrissat, B, Coutinho, R.M, Berrin, J.G, Garron, M.L.
Deposit date:2015-07-17
Release date:2016-01-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:The Quaternary Structure of a Glycoside Hydrolase Dictates Specificity Towards Beta-Glucans
J.Biol.Chem., 291, 2016
2G8U
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BU of 2g8u by Molmil
B. halodurans RNase H catalytic domain D132N mutant in complex with Mg2+ and RNA/DNA hybrid (non-P nick at the active site)
Descriptor: 5'-D(*AP*TP*GP*TP*CP*G)-3', 5'-R(*UP*CP*GP*AP*CP*A)-3', MAGNESIUM ION, ...
Authors:Nowotny, M, Yang, W.
Deposit date:2006-03-03
Release date:2006-04-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Stepwise analyses of metal ions in RNase H catalysis from substrate destabilization to product release.
Embo J., 25, 2006
3VG6
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BU of 3vg6 by Molmil
Barium derivative of human LFABP
Descriptor: BARIUM ION, Fatty acid-binding protein, liver, ...
Authors:Sharma, A, Yogavel, M, Sharma, A.
Deposit date:2011-08-03
Release date:2012-06-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Utility of anion and cation combinations for phasing of protein structures.
J.Struct.Funct.Genom., 13, 2012
2GBL
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BU of 2gbl by Molmil
Crystal Structure of Full Length Circadian Clock Protein KaiC with Phosphorylation Sites
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase kaiC, MAGNESIUM ION
Authors:Pattanayek, R, Williams, D.R, Pattanayek, S, Xu, Y, Mori, T, Johnson, C.H, Stewart, P.L, Egli, M.
Deposit date:2006-03-10
Release date:2007-01-23
Last modified:2021-07-28
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Analysis of KaiA-KaiC protein interactions in the cyano-bacterial circadian clock using hybrid structural methods.
Embo J., 25, 2006
3VGJ
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BU of 3vgj by Molmil
Crystal of Plasmodium falciparum tyrosyl-tRNA synthetase (PfTyrRS)in complex with adenylate analog
Descriptor: ADENOSINE MONOPHOSPHATE, TYROSINE, Tyrosyl-tRNA synthetase, ...
Authors:Banday, M.M, Yogavel, M, Bhatt, T.K, Khan, S, Sharma, A, Sharma, A.
Deposit date:2011-08-14
Release date:2012-07-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.212 Å)
Cite:Malaria parasite tyrosyl-tRNA synthetase secretion triggers pro-inflammatory responses.
Nat Commun, 2, 2011

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