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2EGB
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BU of 2egb by Molmil
Crystal structure of Glu140 to Asn mutant of Diphthine synthase
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Mizutani, H, Matsuura, Y, Krishna Swamy, B.S, Simanshu, D.K, Murthy, M.R.N, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-28
Release date:2007-08-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of diphthine synthase from Pyrococcus horikoshii OT3
To be Published
2DXU
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BU of 2dxu by Molmil
Crystal Structure Of Biotin Protein Ligase From Pyrococcus Horikoshii Complexed with Biotinyl-5'-AMP, Mutation R48A
Descriptor: BIOTINYL-5-AMP, biotin--[acetyl-CoA-carboxylase] ligase
Authors:Bagautdinov, B, Taketa, M, Matsuura, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-08-30
Release date:2007-03-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Protein biotinylation visualized by a complex structure of biotin protein ligase with a substrate
J.Biol.Chem., 283, 2008
2DZ9
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BU of 2dz9 by Molmil
Crystal Structure Of Biotin Protein Ligase From Pyrococcus Horikoshii Complexed with biotinyl-5'-AMP, Mutation D104A
Descriptor: BIOTINYL-5-AMP, biotin--[acetyl-CoA-carboxylase] ligase
Authors:Bagautdinov, B, Matsuura, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-09-26
Release date:2007-03-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Ligand Structures Of Biotin Protein Ligase From Pyrococcus Horikoshii Ot3
To be Published
2DXX
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BU of 2dxx by Molmil
Crystal structure of Asn142 to Glu mutant of Diphthine synthase
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Mizutani, H, Matsuura, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-08-31
Release date:2007-03-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of diphthine synthase from Pyrococcus horikoshii OT3
To be Published
2E16
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BU of 2e16 by Molmil
Crystal structure of Glu140 to Arg mutant of Diphthine synthase
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, Probable diphthine synthase, ...
Authors:Mizutani, H, Matsuura, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-10-18
Release date:2007-04-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of diphthine synthase from Pyrococcus horikoshii OT3
To be Published
2DXV
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BU of 2dxv by Molmil
Crystal structure of Glu54 to His mutant of Diphthine synthase
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Mizutani, H, Matsuura, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-08-31
Release date:2007-03-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of diphthine synthase from Pyrococcus horikoshii OT3
To be Published
2EJF
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BU of 2ejf by Molmil
Crystal Structure Of The Biotin Protein Ligase (Mutations R48A and K111A) and Biotin Carboxyl Carrier Protein Complex From Pyrococcus Horikoshii OT3
Descriptor: 149aa long hypothetical methylmalonyl-CoA decarboxylase gamma chain, 235aa long hypothetical biotin--[acetyl-CoA-carboxylase] ligase, ADENOSINE, ...
Authors:Bagautdinov, B, Matsuura, Y, Bagautdinova, S, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-16
Release date:2008-03-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Protein biotinylation visualized by a complex structure of biotin protein ligase with a substrate
J.Biol.Chem., 283, 2008
2E08
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BU of 2e08 by Molmil
Crystal structure of Glu140 to Lys mutant of Diphthine synthase
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, Probable diphthine synthase, ...
Authors:Mizutani, H, Matsuura, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-10-02
Release date:2007-04-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of diphthine synthase from Pyrococcus horikoshii OT3
To be Published
2DXT
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BU of 2dxt by Molmil
Crystal Structure Of Biotin Protein Ligase From Pyrococcus Horikoshii Complexed with ATP and Biotin, Mutation D104A
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, BIOTIN, biotin--[acetyl-CoA-carboxylase] ligase
Authors:Bagautdinov, B, Matsuura, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-08-30
Release date:2007-03-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Ligand Structures Of Biotin Protein Ligase From Pyrococcus Horikoshii Ot3
To be Published
2E07
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BU of 2e07 by Molmil
Crystal structure of Asp79 to Glu mutant of Diphthine synthase
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, Probable diphthine synthase, ...
Authors:Mizutani, H, Matsuura, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-10-02
Release date:2007-04-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of diphthine synthase from Pyrococcus horikoshii OT3
To be Published
1WA5
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BU of 1wa5 by Molmil
Structure of the Cse1:Imp-alpha:RanGTP complex
Descriptor: GTP-binding nuclear protein Ran, GUANOSINE-5'-TRIPHOSPHATE, Importin alpha re-exporter, ...
Authors:Stewart, M.
Deposit date:2004-10-23
Release date:2004-12-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for the assembly of a nuclear export complex.
Nature, 432, 2004
1CYG
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BU of 1cyg by Molmil
CYCLODEXTRIN GLUCANOTRANSFERASE (E.C.2.4.1.19) (CGTASE)
Descriptor: CALCIUM ION, CYCLODEXTRIN GLUCANOTRANSFERASE
Authors:Kubota, M, Matsuura, Y, Sakai, S, Katsube, Y.
Deposit date:1993-02-03
Release date:1995-02-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:

1C53
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BU of 1c53 by Molmil
S-CLASS CYTOCHROMES C HAVE A VARIETY OF FOLDING PATTERNS: STRUCTURE OF CYTOCHROME C-553 FROM DESULFOVIBRIO VULGARIS DETERMINED BY THE MULTI-WAVELENGTH ANOMALOUS DISPERSION METHOD
Descriptor: CYTOCHROME C553, PROTOPORPHYRIN IX CONTAINING FE
Authors:Nakagawa, A, Higuchi, Y, Yasuoka, N, Katsube, Y, Yaga, T.
Deposit date:1991-08-26
Release date:1993-10-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:S-class cytochromes c have a variety of folding patterns: structure of cytochrome c-553 from Desulfovibrio vulgaris determined by the multi-wavelength anomalous dispersion method.
J.Biochem.(Tokyo), 108, 1990
8JJE
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BU of 8jje by Molmil
RBD of SARS-CoV2 spike protein with ACE2 decoy
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
Authors:Kishikawa, J, Hirose, M, Kato, T, Okamoto, T.
Deposit date:2023-05-30
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:An inhaled ACE2 decoy confers protection against SARS-CoV-2 infection in preclinical models.
Sci Transl Med, 15, 2023
1CRY
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BU of 1cry by Molmil
APPLICATION OF AN AUTOMATIC MOLECULAR REPLACEMENT PROCEDURE TO CRYSTAL STRUCTURE OF CYTOCHROME C2 FROM RHODOPSEUDOMONAS VIRIDIS
Descriptor: CYTOCHROME C2, HEME C
Authors:Miki, K, Sogabe, S.
Deposit date:1993-12-27
Release date:1994-04-30
Last modified:2021-03-03
Method:X-RAY DIFFRACTION (3 Å)
Cite:Application of an automatic molecular-replacement procedure to crystal structure analysis of cytochrome c2 from Rhodopseudomonas viridis.
Acta Crystallogr.,Sect.D, 50, 1994
4FXC
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BU of 4fxc by Molmil
TERTIARY STRUCTURE OF [2FE-2S] FERREDOXIN FROM SPIRULINA PLATENSIS REFINED AT 2.5 ANGSTROMS RESOLUTION: STRUCTURAL COMPARISONS OF PLANT-TYPE FERREDOXINS AND AN ELECTROSTATIC POTENTIAL ANALYSIS
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FERREDOXIN
Authors:Fukuyama, K, Tsukihara, T.
Deposit date:1995-04-25
Release date:1995-12-07
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Tertiary structure of [2Fe-2S] ferredoxin from Spirulina platensis refined at 2.5 A resolution: structural comparisons of plant-type ferredoxins and an electrostatic potential analysis.
J.Biochem.(Tokyo), 117, 1995
1FXI
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BU of 1fxi by Molmil
STRUCTURE OF THE [2FE-2S] FERREDOXIN I FROM THE BLUE-GREEN ALGA APHANOTHECE SACRUM AT 2.2 ANGSTROMS RESOLUTION
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FERREDOXIN I
Authors:Tsukihara, T.
Deposit date:1990-08-28
Release date:1991-10-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of the [2Fe-2S] ferredoxin I from the blue-green alga Aphanothece sacrum at 2.2 A resolution.
J.Mol.Biol., 216, 1990
5GTI
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BU of 5gti by Molmil
Native XFEL structure of photosystem II (two flash dataset)
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Suga, M, Shen, J.R.
Deposit date:2016-08-20
Release date:2017-03-15
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Light-induced structural changes and the site of O=O bond formation in PSII caught by XFEL.
Nature, 543, 2017
5GTH
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BU of 5gth by Molmil
Native XFEL structure of photosystem II (dark dataset)
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Suga, M, Shen, J.R.
Deposit date:2016-08-20
Release date:2017-03-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Light-induced structural changes and the site of O=O bond formation in PSII caught by XFEL.
Nature, 543, 2017
2ZMA
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BU of 2zma by Molmil
Crystal Structure of 6-Aminohexanoate-dimer Hydrolase S112A/G181D/H266N/D370Y Mutant with Substrate
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 6-AMINOHEXANOIC ACID, 6-aminohexanoate-dimer hydrolase, ...
Authors:Ohki, T, Shibata, N, Higuchi, Y, Takeo, M, Negoro, S.
Deposit date:2008-04-14
Release date:2009-04-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Molecular design of a nylon-6 byproduct-degrading enzyme from a carboxylesterase with a beta-lactamase fold
Febs J., 276, 2009
2ZM7
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BU of 2zm7 by Molmil
Structure of 6-Aminohexanoate-dimer Hydrolase, S112A/G181D Mutant Complexed with 6-Aminohexanoate-dimer
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 6-AMINOHEXANOIC ACID, 6-aminohexanoate-dimer hydrolase, ...
Authors:Ohki, T, Shibata, N, Higuchi, Y, Kawashima, Y, Takeo, M, Kato, D, Negoro, S.
Deposit date:2008-04-14
Release date:2009-04-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Molecular design of a nylon-6 byproduct-degrading enzyme from a carboxylesterase with a beta-lactamase fold
Febs J., 276, 2009
2ZM0
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BU of 2zm0 by Molmil
Structure of 6-aminohexanoate-dimer hydrolase, G181D/H266N/D370Y mutant
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 6-aminohexanoate-dimer hydrolase, GLYCEROL, ...
Authors:Ohki, T, Shibata, N, Higuchi, Y, Kawashima, Y, Takeo, M, Kato, D, Nego, S.
Deposit date:2008-04-10
Release date:2009-04-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Molecular design of a nylon-6 byproduct-degrading enzyme from a carboxylesterase with a beta-lactamase fold.
Febs J., 276, 2009
3A66
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BU of 3a66 by Molmil
Crystal structure of 6-aminohexanoate-dimer hydrolase S112A/G181D/H266N/D370Y mutant with substrate
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 6-AMINOHEXANOATE-DIMER HYDROLASE, 6-AMINOHEXANOIC ACID, ...
Authors:Kawashima, Y, Shibata, N, Higuchi, Y, Takeo, M, Negoro, S.
Deposit date:2009-08-21
Release date:2010-09-01
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Enzymatic Synthesis of Nylon-6 Units in Organic Sol Contained Low-Water: Structural Requirement of 6-Aminohexanoate-Dimer Hydrolase for Efficient Amid Synthesis
To be Published
3A65
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BU of 3a65 by Molmil
Crystal structure of 6-aminohexanoate-dimer hydrolase S112A/G181D/H266N mutant with substrate
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 6-AMINOHEXANOIC ACID, 6-aminohexanoate-dimer hydrolase, ...
Authors:Kawashima, Y, Shibata, N, Higuchi, Y, Takeo, M, Negoro, S.
Deposit date:2009-08-21
Release date:2010-09-01
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Enzymatic Synthesis of Nylon-6 Units in Organic Sol Contained Low-Water: Structural Requirement of 6-Aminohexanoate-Dimer Hydrolase for Efficient Amid Synthesis
To be Published
1CO6
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BU of 1co6 by Molmil
CRYSTAL STRUCTURE OF FERROCYTOCHROME C2 FROM RHODOPSEUDOMONAS VIRIDIS
Descriptor: HEME C, PROTEIN (CYTOCHROME C2)
Authors:Miki, K, Sogabe, S.
Deposit date:1999-06-05
Release date:1999-06-18
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Refined crystal structure of ferrocytochrome c2 from Rhodopseudomonas viridis at 1.6 A resolution.
J.Mol.Biol., 252, 1995

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