6Z9Y
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 6z9y by Molmil](/molmil-images/mine/6z9y) | Copper transporter OprC | Descriptor: | COPPER (II) ION, Putative copper transport outer membrane porin OprC | Authors: | Bhamidimarri, S.P, van den Berg, B. | Deposit date: | 2020-06-04 | Release date: | 2021-06-30 | Last modified: | 2024-01-24 | Method: | X-RAY DIFFRACTION (2.95 Å) | Cite: | Acquisition of ionic copper by the bacterial outer membrane protein OprC through a novel binding site. Plos Biol., 19, 2021
|
|
6Z99
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 6z99 by Molmil](/molmil-images/mine/6z99) | Copper transporter OprC | Descriptor: | Putative copper transport outer membrane porin OprC, SILVER ION | Authors: | Bhamidimarri, S.P, van den Berg, B. | Deposit date: | 2020-06-03 | Release date: | 2021-06-30 | Last modified: | 2024-01-24 | Method: | X-RAY DIFFRACTION (2.68 Å) | Cite: | Acquisition of ionic copper by the bacterial outer membrane protein OprC through a novel binding site. Plos Biol., 19, 2021
|
|
5DL8
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 5dl8 by Molmil](/molmil-images/mine/5dl8) | |
5DL5
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 5dl5 by Molmil](/molmil-images/mine/5dl5) | |
5DL7
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 5dl7 by Molmil](/molmil-images/mine/5dl7) | |
5DL6
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 5dl6 by Molmil](/molmil-images/mine/5dl6) | |
7BIZ
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 7biz by Molmil](/molmil-images/mine/7biz) | |
8BLW
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8blw by Molmil](/molmil-images/mine/8blw) | |
8AA4
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8aa4 by Molmil](/molmil-images/mine/8aa4) | |
8AA1
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8aa1 by Molmil](/molmil-images/mine/8aa1) | Core SusCD transporter units from the levan utilisome with levan fructo-oligosaccharides DP 8-12 | Descriptor: | MAGNESIUM ION, SusC homolog, SusD homolog, ... | Authors: | White, J.B.R, Silale, A, Ranson, N.A, van den Berg, B. | Deposit date: | 2022-06-29 | Release date: | 2023-06-07 | Last modified: | 2023-06-21 | Method: | ELECTRON MICROSCOPY (2.9 Å) | Cite: | Outer membrane utilisomes mediate glycan uptake in gut Bacteroidetes. Nature, 618, 2023
|
|
8AA0
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8aa0 by Molmil](/molmil-images/mine/8aa0) | Levan utilisation machinery (utilisome) with levan fructo-oligosaccharides DP 8-12 | Descriptor: | DUF4960 domain-containing protein, Glycoside hydrolase family 32, MAGNESIUM ION, ... | Authors: | White, J.B.R, Silale, A, Ranson, N.A, van den Berg, B. | Deposit date: | 2022-06-29 | Release date: | 2023-06-07 | Last modified: | 2023-06-21 | Method: | ELECTRON MICROSCOPY (3.2 Å) | Cite: | Outer membrane utilisomes mediate glycan uptake in gut Bacteroidetes. Nature, 618, 2023
|
|
8AA2
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8aa2 by Molmil](/molmil-images/mine/8aa2) | Inactive levan utilisation machinery (utilisome) in the presence of levan fructo-oligosaccharides DP 15-25 | Descriptor: | DUF4960 domain-containing protein, Glycoside hydrolase family 32, MAGNESIUM ION, ... | Authors: | White, J.B.R, Silale, A, Ranson, N.A, van den Berg, B. | Deposit date: | 2022-06-29 | Release date: | 2023-06-07 | Last modified: | 2023-06-21 | Method: | ELECTRON MICROSCOPY (3.1 Å) | Cite: | Outer membrane utilisomes mediate glycan uptake in gut Bacteroidetes. Nature, 618, 2023
|
|
8AA3
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8aa3 by Molmil](/molmil-images/mine/8aa3) | Core SusCD transporter units from the inactive levan utilisome in the presence of levan fructo-oligosaccharides DP 15-25 | Descriptor: | MAGNESIUM ION, SusC homolog, SusD homolog, ... | Authors: | White, J.B.R, Silale, A, Ranson, N.A, van den Berg, B. | Deposit date: | 2022-06-29 | Release date: | 2023-06-07 | Last modified: | 2023-06-21 | Method: | ELECTRON MICROSCOPY (2.7 Å) | Cite: | Outer membrane utilisomes mediate glycan uptake in gut Bacteroidetes. Nature, 618, 2023
|
|
8A9Y
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8a9y by Molmil](/molmil-images/mine/8a9y) | Substrate-free levan utilisation machinery (utilisome) | Descriptor: | DUF4960 domain-containing protein, Glycoside hydrolase family 32, MAGNESIUM ION, ... | Authors: | White, J.B.R, Silale, A, Ranson, N.A, van den Berg, B. | Deposit date: | 2022-06-29 | Release date: | 2023-06-07 | Last modified: | 2024-07-24 | Method: | ELECTRON MICROSCOPY (3.5 Å) | Cite: | Outer membrane utilisomes mediate glycan uptake in gut Bacteroidetes. Nature, 618, 2023
|
|
8BMZ
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8bmz by Molmil](/molmil-images/mine/8bmz) | Bacteroides thetaiotaomicron surface lipoprotein BT1954 bound to adenosylcobalamin | Descriptor: | Adenosylcobalamin, CHLORIDE ION, Putative surface layer protein, ... | Authors: | Abellon-Ruiz, J, Jana, K, Silale, A, Basle, A, Kleinekathofer, U, van den Berg, B. | Deposit date: | 2022-11-11 | Release date: | 2023-08-16 | Last modified: | 2023-09-20 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | BtuB TonB-dependent transporters and BtuG surface lipoproteins form stable complexes for vitamin B 12 uptake in gut Bacteroides. Nat Commun, 14, 2023
|
|
8BMY
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8bmy by Molmil](/molmil-images/mine/8bmy) | Bacteroides thetaiotaomicron surface lipoprotein bound to cyanocobalamin | Descriptor: | CHLORIDE ION, CYANOCOBALAMIN, Putative surface layer protein, ... | Authors: | Abellon-Ruiz, J, Jana, K, Silale, A, Basle, A, Kleinekathofer, U, van den Berg, B. | Deposit date: | 2022-11-11 | Release date: | 2023-08-16 | Last modified: | 2023-09-20 | Method: | X-RAY DIFFRACTION (1.72 Å) | Cite: | BtuB TonB-dependent transporters and BtuG surface lipoproteins form stable complexes for vitamin B 12 uptake in gut Bacteroides. Nat Commun, 14, 2023
|
|
8BN0
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8bn0 by Molmil](/molmil-images/mine/8bn0) | Bacteroides thetaiotaomicron surface protein BT1954 bound to | Descriptor: | CHLORIDE ION, COB(II)INAMIDE, CYANIDE ION, ... | Authors: | Abellon-Ruiz, J, Jana, K, Silale, A, Basle, A, Kleinekathofer, U, van den Berg, B. | Deposit date: | 2022-11-11 | Release date: | 2023-08-16 | Last modified: | 2024-06-19 | Method: | X-RAY DIFFRACTION (1.33 Å) | Cite: | BtuB TonB-dependent transporters and BtuG surface lipoproteins form stable complexes for vitamin B 12 uptake in gut Bacteroides. Nat Commun, 14, 2023
|
|
8BMX
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 8bmx by Molmil](/molmil-images/mine/8bmx) | Bacteroides thetaiotaomicron B12 TonB dependent transporter in complex with a surface lipoprotein | Descriptor: | Putative TonB-linked outer membrane receptor, YncE family protein | Authors: | Abellon-Ruiz, J, Jana, K, Silale, A, Basle, A, Kleinekathofer, U, van den Berg, B. | Deposit date: | 2022-11-11 | Release date: | 2023-09-20 | Method: | X-RAY DIFFRACTION (3.72 Å) | Cite: | BtuB TonB-dependent transporters and BtuG surface lipoproteins form stable complexes for vitamin B 12 uptake in gut Bacteroides. Nat Commun, 14, 2023
|
|
6EUS
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 6eus by Molmil](/molmil-images/mine/6eus) | |
6FOM
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 6fom by Molmil](/molmil-images/mine/6fom) | Copper transporter OprC | Descriptor: | (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Putative copper transport outer membrane porin OprC | Authors: | Bhamidimarri, S.P, van den Berg, B. | Deposit date: | 2018-02-07 | Release date: | 2019-03-13 | Last modified: | 2024-01-17 | Method: | X-RAY DIFFRACTION (2.9 Å) | Cite: | Acquisition of ionic copper by the bacterial outer membrane protein OprC through a novel binding site. Plos Biol., 19, 2021
|
|
6FOK
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 6fok by Molmil](/molmil-images/mine/6fok) | Copper transporter OprC | Descriptor: | (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, COPPER (II) ION, Putative copper transport outer membrane porin OprC | Authors: | Bhamidimarri, S.P, van den Berg, B. | Deposit date: | 2018-02-07 | Release date: | 2019-03-13 | Last modified: | 2024-06-19 | Method: | X-RAY DIFFRACTION (1.97 Å) | Cite: | Acquisition of ionic copper by the bacterial outer membrane protein OprC through a novel binding site. Plos Biol., 19, 2021
|
|
6GIE
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 6gie by Molmil](/molmil-images/mine/6gie) | Crystal structure of the Acinetobacter baumannii outer membrane protein Omp33 | Descriptor: | (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 33-36 kDa outer membrane protein | Authors: | Abellon-Ruiz, J, Zahn, M, Basle, A, van den Berg, B. | Deposit date: | 2018-05-10 | Release date: | 2018-09-19 | Last modified: | 2024-05-01 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Crystal structure of the Acinetobacter baumannii outer membrane protein Omp33. Acta Crystallogr D Struct Biol, 74, 2018
|
|
6SML
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 6sml by Molmil](/molmil-images/mine/6sml) | Structure of the RagAB peptide importer in the 'open-open' state | Descriptor: | (1R,4S,6R)-6-({[2-(ACETYLAMINO)-2-DEOXY-ALPHA-D-GLUCOPYRANOSYL]OXY}METHYL)-4-HYDROXY-1-{[(15-METHYLHEXADECANOYL)OXY]METHYL}-4-OXIDO-7-OXO-3,5-DIOXA-8-AZA-4-PHOSPHAHEPTACOS-1-YL 15-METHYLHEXADECANOATE, GLY-THR-GLY-GLY-SER-THR-GLY-THR-THR-SER-ALA-GLY, Lipoprotein RagB, ... | Authors: | White, J.B.R, Ranson, N.A, van den Berg, B. | Deposit date: | 2019-08-22 | Release date: | 2020-05-20 | Last modified: | 2020-08-05 | Method: | ELECTRON MICROSCOPY (3.4 Å) | Cite: | Structural and functional insights into oligopeptide acquisition by the RagAB transporter from Porphyromonas gingivalis. Nat Microbiol, 5, 2020
|
|
6SM3
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 6sm3 by Molmil](/molmil-images/mine/6sm3) | Structure of the RagAB peptide importer in the 'closed-closed' state | Descriptor: | (1R,4S,6R)-6-({[2-(ACETYLAMINO)-2-DEOXY-ALPHA-D-GLUCOPYRANOSYL]OXY}METHYL)-4-HYDROXY-1-{[(15-METHYLHEXADECANOYL)OXY]METHYL}-4-OXIDO-7-OXO-3,5-DIOXA-8-AZA-4-PHOSPHAHEPTACOS-1-YL 15-METHYLHEXADECANOATE, GLY-GLY-ALA-THR-THR-ALA-THR-THR-THR-THR-SER-THR-SER, Lipoprotein RagB, ... | Authors: | White, J.B.R, Ranson, N.A, van den Berg, B. | Deposit date: | 2019-08-21 | Release date: | 2020-05-20 | Last modified: | 2020-08-05 | Method: | ELECTRON MICROSCOPY (3.3 Å) | Cite: | Structural and functional insights into oligopeptide acquisition by the RagAB transporter from Porphyromonas gingivalis. Nat Microbiol, 5, 2020
|
|
6SMQ
![Download](/newweb/media/icons/dl.png) ![Visualize](/newweb/media/icons/hoh_3d.png)
![BU of 6smq by Molmil](/molmil-images/mine/6smq) | Structure of the RagAB peptide importer in the 'open-closed' state | Descriptor: | (1R,4S,6R)-6-({[2-(ACETYLAMINO)-2-DEOXY-ALPHA-D-GLUCOPYRANOSYL]OXY}METHYL)-4-HYDROXY-1-{[(15-METHYLHEXADECANOYL)OXY]METHYL}-4-OXIDO-7-OXO-3,5-DIOXA-8-AZA-4-PHOSPHAHEPTACOS-1-YL 15-METHYLHEXADECANOATE, (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Lipoprotein RagB, ... | Authors: | White, J.B.R, Ranson, N.A, van den Berg, B. | Deposit date: | 2019-08-22 | Release date: | 2020-05-20 | Last modified: | 2020-08-05 | Method: | ELECTRON MICROSCOPY (3.3 Å) | Cite: | Structural and functional insights into oligopeptide acquisition by the RagAB transporter from Porphyromonas gingivalis. Nat Microbiol, 5, 2020
|
|