Loading
PDBj
English日本語简体中文繁體中文한국어
✖
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3NPD
DownloadVisualize
BU of 3npd by Molmil
Crystal structure of a putative secreted protein (PA3611) from PSEUDOMONAS AERUGINOSA at 1.60 A resolution
Descriptor: 1,2-ETHANEDIOL, 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, SULFATE ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2010-06-28
Release date:2010-07-28
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of a putative quorum sensing-regulated protein (PA3611) from the Pseudomonas-specific DUF4146 family.
Proteins, 82, 2014
3O0F
DownloadVisualize
BU of 3o0f by Molmil
Crystal structure of a putative metal-dependent phosphoesterase (BAD_1165) from bifidobacterium adolescentis atcc 15703 at 1.94 A resolution
Descriptor: 1,2-ETHANEDIOL, ADENOSINE MONOPHOSPHATE, FE (III) ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2010-07-19
Release date:2010-08-25
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Crystal structure of a metal-dependent phosphoesterase (YP_910028.1) from Bifidobacterium adolescentis: Computational prediction and experimental validation of phosphoesterase activity.
Proteins, 79, 2011
3M82
DownloadVisualize
BU of 3m82 by Molmil
Crystal structure of Acetyl xylan esterase (TM0077) from THERMOTOGA MARITIMA at 2.40 A resolution (PMSF inhibitor complex structure)
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Acetyl xylan esterase, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2010-03-17
Release date:2010-05-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Functional and structural characterization of a thermostable acetyl esterase from Thermotoga maritima.
Proteins, 80, 2012
3OYV
DownloadVisualize
BU of 3oyv by Molmil
Crystal structure of an imelysin peptidase (BACOVA_03801) from Bacteroides ovatus ATCC 8483 at 1.25 A resolution
Descriptor: CHLORIDE ION, GLYCEROL, Imelysin, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2010-09-23
Release date:2010-10-20
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structural and sequence analysis of imelysin-like proteins implicated in bacterial iron uptake.
Plos One, 6, 2011
3OZ2
DownloadVisualize
BU of 3oz2 by Molmil
Crystal structure of a geranylgeranyl bacteriochlorophyll reductase-like (Ta0516) from Thermoplasma acidophilum at 1.60 A resolution
Descriptor: (2R)-3-{[(R)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-2-[(6Z)-tridec-6-enoyloxy]propyl (9Z)-octadec-9-enoate, 1,2-ETHANEDIOL, Digeranylgeranylglycerophospholipid reductase, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2010-09-24
Release date:2010-10-27
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Insights into substrate specificity of geranylgeranyl reductases revealed by the structure of digeranylgeranylglycerophospholipid reductase, an essential enzyme in the biosynthesis of archaeal membrane lipids.
J.Mol.Biol., 404, 2010
3F1Z
DownloadVisualize
BU of 3f1z by Molmil
Crystal structure of putative nucleic acid-binding lipoprotein (YP_001337197.1) from Klebsiella pneumoniae subsp. pneumoniae MGH 78578 at 2.46 A resolution
Descriptor: DI(HYDROXYETHYL)ETHER, putative nucleic acid-binding lipoprotein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2008-10-28
Release date:2008-11-18
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:The structure of KPN03535 (gi|152972051), a novel putative lipoprotein from Klebsiella pneumoniae, reveals an OB-fold.
Acta Crystallogr.,Sect.F, 66, 2010
3CM1
DownloadVisualize
BU of 3cm1 by Molmil
Crystal structure of SsgA-like sporulation-specific cell division protein (YP_290167.1) from Thermobifida fusca YX-ER1 at 2.60 A resolution
Descriptor: SsgA-like sporulation-specific cell division protein
Authors:Joint Center for Structural Genomics (JCSG), Chruszcz, M, Minor, W, Wang, S.
Deposit date:2008-03-20
Release date:2008-04-01
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural and functional characterizations of SsgB, a conserved activator of developmental cell division in morphologically complex actinomycetes.
J.Biol.Chem., 284, 2009
3D00
DownloadVisualize
BU of 3d00 by Molmil
Crystal structure of a tungsten formylmethanofuran dehydrogenase subunit e (fmde)-like protein (syn_00638) from syntrophus aciditrophicus at 1.90 A resolution
Descriptor: CHLORIDE ION, Tungsten formylmethanofuran dehydrogenase subunit E, ZINC ION
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2008-04-30
Release date:2008-05-20
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of three members of Pfam PF02663 (FmdE) implicated in microbial methanogenesis reveal a conserved alpha+beta core domain and an auxiliary C-terminal treble-clef zinc finger.
Acta Crystallogr.,Sect.F, 66, 2010
3DEE
DownloadVisualize
BU of 3dee by Molmil
CRYSTAL STRUCTURE OF A PUTATIVE REGULATORY PROTEIN INVOLVED IN TRANSCRIPTION (NGO1945) FROM NEISSERIA GONORRHOEAE FA 1090 AT 2.25 A RESOLUTION
Descriptor: CHLORIDE ION, IMIDAZOLE, Putative regulatory protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2008-06-09
Release date:2008-08-05
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The structure of the first representative of Pfam family PF09836 reveals a two-domain organization and suggests involvement in transcriptional regulation.
Acta Crystallogr.,Sect.F, 66, 2010
3CGH
DownloadVisualize
BU of 3cgh by Molmil
Crystal structure of a susd homolog (bt_3984) from bacteroides thetaiotaomicron vpi-5482 at 1.70 A resolution
Descriptor: ACETATE ION, SusD homolog, ZINC ION
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2008-03-05
Release date:2008-03-18
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of BT_3984, a member of the SusD/RagB family of nutrient-binding molecules.
Acta Crystallogr.,Sect.F, 66, 2010
3FKQ
DownloadVisualize
BU of 3fkq by Molmil
Crystal structure of NtrC-like two-domain protein (RER070207001320) from Eubacterium rectale at 2.10 A resolution
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, GLYCEROL, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2008-12-17
Release date:2009-01-06
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of the pilus assembly protein TadZ from Eubacterium rectale: implications for polar localization.
Mol.Microbiol., 83, 2012
3DL1
DownloadVisualize
BU of 3dl1 by Molmil
Crystal structure of a Putative Metal-dependent Hydrolase (YP_001336084.1) from Klebsiella pneumoniae subsp. pneumoniae MGH 78578 at 2.20 A resolution
Descriptor: CHLORIDE ION, Putative Metal-dependent Hydrolase
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2008-06-26
Release date:2008-08-26
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Structure of Mlc Titration Factor A (MtfA/YeeI) Reveals a Prototypical Zinc Metallopeptidase Related to Anthrax Lethal Factor.
J.Bacteriol., 194, 2012
3DCX
DownloadVisualize
BU of 3dcx by Molmil
Crystal structure of a duf1696 family protein with a pleckstrin-homology domain (shew_0819) from shewanella loihica pv-4 at 2.00 A resolution
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Protein of Unknown Function (DUF1696) with Pleckstrin-homology Domains
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2008-06-04
Release date:2008-07-29
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Bacterial pleckstrin homology domains: a prokaryotic origin for the PH domain.
J.Mol.Biol., 396, 2010
3G23
DownloadVisualize
BU of 3g23 by Molmil
Crystal structure of a ld-carboxypeptidase a (saro_1426) from novosphingobium aromaticivorans dsm at 1.89 A resolution
Descriptor: GLYCEROL, LD-carboxypeptidase A, SULFATE ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-01-30
Release date:2009-02-10
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structure and function of a novel LD-carboxypeptidase a involved in peptidoglycan recycling.
J.Bacteriol., 195, 2013
3G0T
DownloadVisualize
BU of 3g0t by Molmil
Crystal structure of putative aspartate aminotransferase (NP_905498.1) from Porphyromonas gingivalis W83 at 1.75 A resolution
Descriptor: 1,2-ETHANEDIOL, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, CHLORIDE ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-01-28
Release date:2009-02-10
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Molecular characterization of novel pyridoxal-5'-phosphate-dependent enzymes from the human microbiome.
Protein Sci., 23, 2014
3E0F
DownloadVisualize
BU of 3e0f by Molmil
Crystal structure of a putative metal-dependent phosphoesterase (bad_1165) from bifidobacterium adolescentis atcc 15703 at 2.40 A resolution
Descriptor: ACETATE ION, FE (III) ION, PHOSPHATE ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2008-07-31
Release date:2008-09-02
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of a metal-dependent phosphoesterase (YP_910028.1) from Bifidobacterium adolescentis: Computational prediction and experimental validation of phosphoesterase activity.
Proteins, 79, 2011
3DUE
DownloadVisualize
BU of 3due by Molmil
CRYSTAL STRUCTURE OF A PUTATIVE PERIPLASMIC PROTEIN FROM DUF2874 FAMILY (BVU_2987) FROM BACTEROIDES VULGATUS ATCC 8482 AT 1.85 A RESOLUTION
Descriptor: CACODYLATE ION, Putative periplasmic protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2008-07-17
Release date:2008-08-05
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The structure of BVU2987 from Bacteroides vulgatus reveals a superfamily of bacterial periplasmic proteins with possible inhibitory function.
Acta Crystallogr.,Sect.F, 66, 2010
3EQX
DownloadVisualize
BU of 3eqx by Molmil
CRYSTAL STRUCTURE OF A FIC FAMILY PROTEIN (SO_4266) FROM SHEWANELLA ONEIDENSIS AT 1.6 A RESOLUTION
Descriptor: FIC DOMAIN CONTAINING TRANSCRIPTIONAL REGULATOR, TRIETHYLENE GLYCOL
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2008-10-01
Release date:2008-10-14
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of the Fic (Filamentation induced by cAMP) family protein SO4266 (gi|24375750) from Shewanella oneidensis MR-1 at 1.6 A resolution.
Proteins, 75, 2009
3ETN
DownloadVisualize
BU of 3etn by Molmil
Crystal structure of putative phosphosugar isomerase involved in capsule formation (YP_209877.1) from Bacteroides fragilis NCTC 9343 at 1.70 A resolution
Descriptor: 1,2-ETHANEDIOL, CYTIDINE 5'-MONOPHOSPHATE 3-DEOXY-BETA-D-GULO-OCT-2-ULO-PYRANOSONIC ACID, putative phosphosugar isomerase involved in capsule formation
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2008-10-08
Release date:2008-10-21
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural analysis of arabinose-5-phosphate isomerase from Bacteroides fragilis and functional implications.
Acta Crystallogr.,Sect.D, 70, 2014
1VJ2
DownloadVisualize
BU of 1vj2 by Molmil
Crystal structure of a novel family of manganese-containing cupin (tm1459) from thermotoga maritima at 1.65 A resolution
Descriptor: MANGANESE (II) ION, UNKNOWN LIGAND, novel manganese-containing cupin TM1459
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2003-12-03
Release date:2003-12-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of a novel manganese-containing cupin (TM1459) from Thermotoga maritima at 1.65 A resolution.
Proteins, 56, 2004
1VKB
DownloadVisualize
BU of 1vkb by Molmil
Crystal structure of an aig2-like protein (a2ld1, ggact, mgc7867) from mus musculus at 1.90 A resolution
Descriptor: FORMIC ACID, hypothetical protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2004-05-07
Release date:2004-05-18
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of a conserved hypothetical protein (gi: 13879369) from Mouse at 1.90 A resolution reveals a new fold.
Proteins, 61, 2005
1VLQ
DownloadVisualize
BU of 1vlq by Molmil
Crystal structure of Acetyl xylan esterase (TM0077) from Thermotoga maritima at 2.10 A resolution
Descriptor: GLYCEROL, acetyl xylan esterase
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2004-08-09
Release date:2004-08-24
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Functional and structural characterization of a thermostable acetyl esterase from Thermotoga maritima.
Proteins, 80, 2012
1VKY
DownloadVisualize
BU of 1vky by Molmil
Crystal structure of S-adenosylmethionine tRNA ribosyltransferase (TM0574) from Thermotoga maritima at 2.00 A resolution
Descriptor: S-adenosylmethionine:tRNA ribosyltransferase-isomerase, UNKNOWN LIGAND
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2004-06-28
Release date:2004-08-17
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of S-adenosylmethionine:tRNA ribosyltransferase-isomerase (QueA) from Thermotoga maritima at 2.0 A resolution reveals a new fold.
Proteins, 59, 2005
1VR0
DownloadVisualize
BU of 1vr0 by Molmil
Crystal structure of putative 2-phosphosulfolactate phosphatase (15026306) from Clostridium acetobutylicum at 2.6 A resolution
Descriptor: (2R)-3-SULFOLACTIC ACID, MAGNESIUM ION, Probable 2-phosphosulfolactate phosphatase
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2005-01-26
Release date:2005-02-15
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Crystal structure of 2-phosphosulfolactate phosphatase (ComB) from Clostridium acetobutylicum at 2.6 A resolution reveals a new fold with a novel active site.
Proteins, 65, 2006
1VLR
DownloadVisualize
BU of 1vlr by Molmil
Crystal structure of mRNA decapping enzyme (DcpS) from Mus musculus at 1.83 A resolution
Descriptor: 1,2-ETHANEDIOL, mRNA decapping enzyme
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2004-08-10
Release date:2004-08-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Crystal structure of an Apo mRNA decapping enzyme (DcpS) from Mouse at 1.83 A resolution.
Proteins, 60, 2005

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon