Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4RTC
DownloadVisualize
BU of 4rtc by Molmil
Crystal structure of the green fluorescent variant, nowGFP, of the cyan Cerulean at pH 9.0
Descriptor: GLYCEROL, nowGFP
Authors:Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
Deposit date:2014-11-14
Release date:2015-09-02
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structure of the green fluorescent protein NowGFP with an anionic tryptophan-based chromophore.
Acta Crystallogr.,Sect.D, 71, 2015
4RYS
DownloadVisualize
BU of 4rys by Molmil
Crystal structure of the green fluorescent rotein NowGFP (the variant of cyan Cerulean) at pH 4.8
Descriptor: GLYCEROL, NowGFP
Authors:Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
Deposit date:2014-12-17
Release date:2015-09-02
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Structure of the green fluorescent protein NowGFP with an anionic tryptophan-based chromophore.
Acta Crystallogr.,Sect.D, 71, 2015
4JGE
DownloadVisualize
BU of 4jge by Molmil
Crystal structure of red fluorescent gene-engineered variant with improved folding - lanRFP_delS83 (Branchiostoma lanceolatum)
Descriptor: GLYCEROL, Red fluorescent protein blFP-R5
Authors:Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
Deposit date:2013-03-01
Release date:2013-09-18
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structure of the red fluorescent protein from a lancelet (Branchiostoma lanceolatum): a novel GYG chromophore covalently bound to a nearby tyrosine.
Acta Crystallogr.,Sect.D, 69, 2013
3LVD
DownloadVisualize
BU of 3lvd by Molmil
Crystal structure of GFP-like protein aceGFP_G222E (A. coerulescens). UV-photoconverted green form.
Descriptor: GLYCEROL, Green fluorescent protein
Authors:Pletneva, N.V, Pletnev, V.Z, Pletnev, S.V.
Deposit date:2010-02-19
Release date:2010-03-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.751 Å)
Cite:Structural evidence for a dehydrated intermediate in green fluorescent protein chromophore biosynthesis.
J.Biol.Chem., 285, 2010
3LVC
DownloadVisualize
BU of 3lvc by Molmil
Crystal structure of GFP-like protein aceGFP_G222E (A. coerulescens). Colorless form.
Descriptor: GLYCEROL, Green fluorescent protein
Authors:Pletneva, N.V, Pletnev, V.Z, Pletnev, S.V.
Deposit date:2010-02-19
Release date:2010-03-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Structural evidence for a dehydrated intermediate in green fluorescent protein chromophore biosynthesis.
J.Biol.Chem., 285, 2010
3LVA
DownloadVisualize
BU of 3lva by Molmil
Crystal structure of colorless GFP-like protein from Aequorea coerulescens
Descriptor: GLYCEROL, Green fluorescent protein, SULFATE ION
Authors:Pletneva, N.V, Pletnev, V.Z, Pletnev, S.V.
Deposit date:2010-02-19
Release date:2010-03-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural evidence for a dehydrated intermediate in green fluorescent protein chromophore biosynthesis.
J.Biol.Chem., 285, 2010
4JEO
DownloadVisualize
BU of 4jeo by Molmil
Crystal structure of red fluorescent protein lanRFPdam exposed to prolonged X-ray irradiation
Descriptor: GLYCEROL, Red fluorescent protein blFP-R5
Authors:Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
Deposit date:2013-02-27
Release date:2013-09-18
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structure of the red fluorescent protein from a lancelet (Branchiostoma lanceolatum): a novel GYG chromophore covalently bound to a nearby tyrosine.
Acta Crystallogr.,Sect.D, 69, 2013
4JF9
DownloadVisualize
BU of 4jf9 by Molmil
Crystal structure of the wild type red fluorescent protein lanRFP (Branchiostoma Lanceolatum)
Descriptor: Red fluorescent protein blFP-R5
Authors:Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
Deposit date:2013-02-28
Release date:2013-09-18
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Structure of the red fluorescent protein from a lancelet (Branchiostoma lanceolatum): a novel GYG chromophore covalently bound to a nearby tyrosine.
Acta Crystallogr.,Sect.D, 69, 2013
8BVG
DownloadVisualize
BU of 8bvg by Molmil
Bright fluorescent protein BrUSLEE with subnanosecond fluorescence lifetime
Descriptor: BrUSSLEE, GLYCEROL
Authors:Pletnev, V, Pletneva, N.
Deposit date:2022-12-03
Release date:2023-04-12
Last modified:2023-04-26
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Crystal Structure of Bright Fluorescent Protein BrUSLEE with Subnanosecond Fluorescence Lifetime; Electric and Dynamic Properties.
Int J Mol Sci, 24, 2023
4HVF
DownloadVisualize
BU of 4hvf by Molmil
Crystal structure of green fluorescent protein lanGFP(Branchiostoma Lanceolatum)
Descriptor: GLYCEROL, Green fluorescent protein blFP-Y6
Authors:Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
Deposit date:2012-11-06
Release date:2013-09-18
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of the red fluorescent protein from a lancelet (Branchiostoma lanceolatum): a novel GYG chromophore covalently bound to a nearby tyrosine.
Acta Crystallogr.,Sect.D, 69, 2013
5DQB
DownloadVisualize
BU of 5dqb by Molmil
Green/cyan WasCFP at pH 8.0
Descriptor: GLYCEROL, SODIUM ION, WasCFP_pH2
Authors:Pletnev, V, Pletneva, N, Pletnev, S.
Deposit date:2015-09-14
Release date:2016-07-27
Last modified:2019-02-20
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Crystal structure of pH and T dependent green fluorescent protein WasCFP with Trp based chromophore
Russ.J.Bioorganic Chem., 42 (6), 2016
4RI7
DownloadVisualize
BU of 4ri7 by Molmil
Crystal structure of poplar glutathione transferase F1 mutant SER 13 CYS
Descriptor: GLUTATHIONE, Phi class glutathione transferase GSTF1
Authors:Pegeot, H, Mathiot, S, Didierjean, C, Rouhier, N.
Deposit date:2014-10-05
Release date:2015-01-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.798 Å)
Cite:The poplar Phi class glutathione transferase: expression, activity and structure of GSTF1.
Front Plant Sci, 5, 2014
3H0S
DownloadVisualize
BU of 3h0s by Molmil
Crystal structure of the carboxyltransferase domain of acetyl-coenzyme A carboxylase in complex with compound 7
Descriptor: 1'-(1H-indazol-7-ylcarbonyl)-6-methylspiro[chromene-2,4'-piperidin]-4(3H)-one, Acetyl-CoA carboxylase, SULFATE ION
Authors:Vajdos, F.
Deposit date:2009-04-10
Release date:2010-04-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Discovery of small molecule isozyme non-specific inhibitors of mammalian acetyl-CoA carboxylase 1 and 2.
Bioorg.Med.Chem.Lett., 20, 2010
3H0Q
DownloadVisualize
BU of 3h0q by Molmil
Crystal structure of the carboxyltransferase domain of acetyl-coenzyme A carboxylase in complex with compound 3
Descriptor: 4-({4-[(2-methylquinolin-6-yl)methyl]piperidin-1-yl}carbonyl)-2-phenylquinoline, Acetyl-CoA carboxylase
Authors:Zhang, H, Tong, L.
Deposit date:2009-04-10
Release date:2010-04-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Discovery of small molecule isozyme non-specific inhibitors of mammalian acetyl-CoA carboxylase 1 and 2.
Bioorg.Med.Chem.Lett., 20, 2010
5EXB
DownloadVisualize
BU of 5exb by Molmil
Wild type green fluorescent protein DendFP (Dendronephthya sp.)
Descriptor: GLYCEROL, Green fluorescent protein
Authors:Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
Deposit date:2015-11-23
Release date:2016-08-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Crystal structure of the fluorescent protein from Dendronephthya sp. in both green and photoconverted red forms.
Acta Crystallogr D Struct Biol, 72, 2016
3H0J
DownloadVisualize
BU of 3h0j by Molmil
Crystal structure of the carboxyltransferase domain of acetyl-coenzyme A carboxylase in complex with compound 2
Descriptor: 6-{[1-(anthracen-9-ylcarbonyl)piperidin-4-yl]methyl}-2-methylquinoline, Acetyl-CoA carboxylase
Authors:Zhang, H, Tong, L.
Deposit date:2009-04-09
Release date:2010-04-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Discovery of small molecule isozyme non-specific inhibitors of mammalian acetyl-CoA carboxylase 1 and 2.
Bioorg.Med.Chem.Lett., 20, 2010
5EXC
DownloadVisualize
BU of 5exc by Molmil
Photoconverted red fluorescent protein DendRFP
Descriptor: GLYCEROL, Green fluorescent protein, MAGNESIUM ION
Authors:Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
Deposit date:2015-11-23
Release date:2016-08-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Crystal structure of the fluorescent protein from Dendronephthya sp. in both green and photoconverted red forms.
Acta Crystallogr D Struct Biol, 72, 2016
5ABS
DownloadVisualize
BU of 5abs by Molmil
CRYSTAL STRUCTURE OF THE C-TERMINAL COILED-COIL DOMAIN OF CIN85 IN SPACE GROUP P321
Descriptor: SH3 DOMAIN-CONTAINING KINASE-BINDING PROTEIN 1, ZINC ION
Authors:Wong, L, Habeck, M, Griesinger, C, Becker, S.
Deposit date:2015-08-07
Release date:2016-07-13
Last modified:2019-02-06
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:The Adaptor Protein Cin85 Assembles Intracellular Signaling Clusters for B Cell Activation.
Sci.Signal., 9, 2016
4RI6
DownloadVisualize
BU of 4ri6 by Molmil
Crystal structure of poplar glutathione transferase F1
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLUTATHIONE, Phi class glutathione transferase GSTF1
Authors:Pegeot, H, Koh, C.S, Didierjean, C, Rouhier, N.
Deposit date:2014-10-05
Release date:2015-01-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.523 Å)
Cite:The poplar Phi class glutathione transferase: expression, activity and structure of GSTF1.
Front Plant Sci, 5, 2014
8DEQ
DownloadVisualize
BU of 8deq by Molmil
Cryo-EM local refinement of antibody SKV09 in complex with VEEV alphavirus spike glycoprotein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, SKV09 Fab Heavy Chain, SKV09 Fab Light Chain, ...
Authors:Casner, R.G, Verardi, R, Roederer, M, Shapiro, L.
Deposit date:2022-06-21
Release date:2023-06-28
Method:ELECTRON MICROSCOPY (6 Å)
Cite:Vaccine elicitation and structural basis for antibody protection against alphaviruses.
Cell, 186, 2023
8DER
DownloadVisualize
BU of 8der by Molmil
Cryo-EM local refinement of antibody SKV16 in complex with VEEV alphavirus spike glycoprotein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, SKV16 Fab Heavy Chain, ...
Authors:Casner, R.G, Verardi, R, Roederer, M, Shapiro, L.
Deposit date:2022-06-21
Release date:2023-06-28
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Vaccine elicitation and structural basis for antibody protection against alphaviruses.
Cell, 186, 2023
2PXS
DownloadVisualize
BU of 2pxs by Molmil
Crystal Structure of N66D Mutant of Green Fluorescent Protein from Zoanthus sp. at 2.2 A Resolution (Mature State)
Descriptor: GFP-like fluorescent chromoprotein FP506
Authors:Pletnev, S.V, Pletneva, N.V, Tikhonova, T.V, Pletnev, V.Z.
Deposit date:2007-05-14
Release date:2007-09-25
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Refined crystal structures of red and green fluorescent proteins from the button polyp Zoanthus.
Acta Crystallogr.,Sect.D, 63, 2007
7OOO
DownloadVisualize
BU of 7ooo by Molmil
The crystal structure of a DNA:RNA hybrid duplex sequence CTTTTCTTTG containing an LNA-Amide-LNA modification
Descriptor: DNA (5'-D(*CP*TP*(05A)P*TP*CP*TP*TP*TP*G)-3'), MAGNESIUM ION, RNA (5'-R(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3')
Authors:Thorpe, C, Hardwick, J, McDonough, M.A, Hall, J.P, Baker, Y.R, El-Sagheer, A.H, Brown, T.
Deposit date:2021-05-28
Release date:2022-08-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:An LNA-amide modification that enhances the cell uptake and activity of phosphorothioate exon-skipping oligonucleotides.
Nat Commun, 13, 2022
7OOS
DownloadVisualize
BU of 7oos by Molmil
The crystal structure of a DNA:RNA hybrid duplex sequence CTTTTCTTTG
Descriptor: DNA (5'-D(*CP*TP*(05K)P*TP*CP*TP*TP*TP*G)-3'), RNA (5'-R(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3'), STRONTIUM ION
Authors:Thorpe, C, Hardwick, J, McDonough, M.A, Hall, J.P, Baker, Y.R, El-Sagheer, A.H, Brown, T.
Deposit date:2021-05-28
Release date:2022-08-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:An LNA-amide modification that enhances the cell uptake and activity of phosphorothioate exon-skipping oligonucleotides.
Nat Commun, 13, 2022
7OZZ
DownloadVisualize
BU of 7ozz by Molmil
The crystal structure of a DNA:RNA hybrid duplex sequence CTTTTCTTTG with LNA-amide modification
Descriptor: DNA (5'-D(*CP*TP*(05H)P*TP*CP*TP*TP*TP*G)-3'), POTASSIUM ION, RNA (5'-R(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3')
Authors:Thorpe, C, Hardwick, J, McDonough, M.A, Hall, J.P, Baker, Y.R, El-Sagheer, A.H, Brown, T.
Deposit date:2021-06-29
Release date:2022-08-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:An LNA-amide modification that enhances the cell uptake and activity of phosphorothioate exon-skipping oligonucleotides.
Nat Commun, 13, 2022

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon