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6R0L
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BU of 6r0l by Molmil
Histone fold domain of OsGhd8/NF-YC7 in I2
Descriptor: GLYCEROL, OsGhd8, OsNF-YC7
Authors:Chaves-Sanjuan, A, Gobbini, A, Nardini, M.
Deposit date:2019-03-13
Release date:2020-09-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural determinants for NF-Y subunit organization and NF-Y/DNA association in plants.
Plant J., 105, 2021
2WTG
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BU of 2wtg by Molmil
High resolution 3D structure of C.elegans globin-like protein GLB-1
Descriptor: GLOBIN-LIKE PROTEIN, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Geuens, E, Hoogewijs, D, Nardini, M, Vinck, E, Pesce, A, Kiger, L, Fago, A, Tilleman, L, De Henau, S, Marden, M, Weber, R.E, Van Doorslaer, S, Vanfleteren, J, Moens, L, Bolognesi, M, Dewilde, S.
Deposit date:2009-09-16
Release date:2010-04-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Globin-Like Proteins in Caenorhabditis Elegans: In Vivo Localization, Ligand Binding and Structural Properties.
Bmc Biochem., 11, 2010
5NWK
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BU of 5nwk by Molmil
14-3-3c in complex with CPP and fusicoccin
Descriptor: 14-3-3 c-1 protein, FUSICOCCIN, PHOSPHOSERINE, ...
Authors:Saponaro, A, Porro, A, Chaves-Sanjuan, A, Nardini, M, Thiel, G, Moroni, A.
Deposit date:2017-05-06
Release date:2017-11-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Fusicoccin Activates KAT1 Channels by Stabilizing Their Interaction with 14-3-3 Proteins.
Plant Cell, 29, 2017
5NWI
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BU of 5nwi by Molmil
14-3-3c in complex with CPP
Descriptor: 14-3-3 c-1 protein, ACETATE ION, Potassium channel KAT1
Authors:Saponaro, A, Porro, A, Chaves-Sanjuan, A, Nardini, M, Thiel, G, Moroni, A.
Deposit date:2017-05-06
Release date:2017-11-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Fusicoccin Activates KAT1 Channels by Stabilizing Their Interaction with 14-3-3 Proteins.
Plant Cell, 29, 2017
5NWJ
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BU of 5nwj by Molmil
14-3-3c in complex with CPP7
Descriptor: 14-3-3-like protein C, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Saponaro, A, Porro, A, Chaves-Sanjuan, A, Nardini, M, Thiel, G, Moroni, A.
Deposit date:2017-05-06
Release date:2017-11-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Fusicoccin Activates KAT1 Channels by Stabilizing Their Interaction with 14-3-3 Proteins.
Plant Cell, 29, 2017
2WTH
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BU of 2wth by Molmil
Low resolution 3D structure of C.elegans globin-like protein (GLB-1): P3121 crystal form
Descriptor: GLOBIN-LIKE PROTEIN, GLYCEROL, OXYGEN MOLECULE, ...
Authors:Geuens, E, Hoogewijs, D, Nardini, M, Vinck, E, Pesce, A, Kiger, L, Fago, A, Tilleman, L, De Henau, S, Marden, M, Weber, R.E, Van Doorslaer, S, Vanfleteren, J, Moens, L, Bolognesi, M, Dewilde, S.
Deposit date:2009-09-16
Release date:2010-04-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Globin-Like Proteins in Caenorhabditis Elegans: In Vivo Localization, Ligand Binding and Structural Properties.
Bmc Biochem., 11, 2010
4CSR
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BU of 4csr by Molmil
High resolution crystal structure of the histone fold dimer (NF-YB)-(NF-YC)
Descriptor: GLYCEROL, NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT BETA, NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT GAMMA
Authors:Gnesutta, N, Cocolo, S, Mantovani, R, Bolognesi, M, Nardini, M.
Deposit date:2014-03-09
Release date:2015-03-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:High Resolution Crystal Structure of the Histone Fold Dimer (NF-Yb)-(NF-Yc)
To be Published
2HIH
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BU of 2hih by Molmil
Crystal structure of Staphylococcus hyicus lipase
Descriptor: CALCIUM ION, Lipase 46 kDa form, ZINC ION
Authors:Tiesinga, J.J.W, van Pouderoyen, G, Nardini, M, Dijkstra, B.W.
Deposit date:2006-06-29
Release date:2007-05-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:Structural basis of phospholipase activity of Staphylococcus hyicus lipase.
J.Mol.Biol., 371, 2007
2VYW
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BU of 2vyw by Molmil
Hemoglobin (Hb2) from trematode Fasciola hepatica
Descriptor: HEMOGLOBIN, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Dewilde, S, Ioanitescu, A.I, Kiger, L, Gilany, K, Marden, M.C, Van Doorslaer, S, Vercruysse, J, Pesce, A, Nardini, M, Bolognesi, M, Moens, L.
Deposit date:2008-07-29
Release date:2008-08-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Hemoglobins of the Trematodes Fasciola Hepatica and Paramphistomum Epiclitum: A Molecular Biological, Physico-Chemical, Kinetic, and Vaccination Study.
Protein Sci., 17, 2008
2VYY
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BU of 2vyy by Molmil
Mutant Ala55Trp of Cerebratuls lacteus mini-hemoglobin
Descriptor: GLYCEROL, NEURAL HEMOGLOBIN, OXYGEN MOLECULE, ...
Authors:Salter, M.D, Nienhaus, K, Nienhaus, G.U, Dewilde, S, Moens, L, Pesce, A, Nardini, M, Bolognesi, M, Olson, J.S.
Deposit date:2008-07-29
Release date:2008-10-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Apolar Channel in Cerebratulus Lacteus Hemoglobin is the Route for O2 Entry and Exit.
J.Biol.Chem., 283, 2008
2VYZ
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BU of 2vyz by Molmil
Mutant Ala55Phe of Cerebratulus lacteus mini-hemoglobin
Descriptor: ACETATE ION, GLYCEROL, NEURAL HEMOGLOBIN, ...
Authors:Salter, M.D, Nienhaus, K, Nienhaus, G.U, Dewilde, S, Moens, L, Pesce, A, Nardini, M, Bolognesi, M, Olson, J.S.
Deposit date:2008-07-29
Release date:2008-10-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Apolar Channel in Cerebratulus Lacteus Hemoglobin is the Route for O2 Entry and Exit.
J.Biol.Chem., 283, 2008
2XKG
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BU of 2xkg by Molmil
C.lacteus mini-Hb Leu86Ala mutant
Descriptor: NEURAL HEMOGLOBIN, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Pesce, A, Nardini, M, Dewilde, S, Capece, L, Marti, M.A, Congia, S, Salter, M.D, Blouin, G.C, Estrin, D.A, Ascenzi, P, Moens, L, Bolognesi, M, Olson, J.S.
Deposit date:2010-07-08
Release date:2010-12-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Ligand Migration in the Apolar Tunnel of Cerebratulus Lacteus Mini-Hemoglobin.
J.Biol.Chem., 286, 2011
2XKI
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BU of 2xki by Molmil
Aquo-met structure of C.lacteus mini-Hb
Descriptor: GLYCEROL, NEURAL HEMOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Pesce, A, Nardini, M, Dewilde, S, Capece, L, Marti, M.A, Congia, S, Salter, M.D, Blouin, G.C, Estrin, D.A, Ascenzi, P, Moens, L, Bolognesi, M, Olson, J.S.
Deposit date:2010-07-08
Release date:2010-12-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Ligand Migration in the Apolar Tunnel of Cerebratulus Lacteus Mini-Hemoglobin.
J.Biol.Chem., 286, 2011
2XKH
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BU of 2xkh by Molmil
Xe derivative of C.lacteus mini-Hb Leu86Ala mutant
Descriptor: NEURAL HEMOGLOBIN, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Pesce, A, Nardini, M, Dewilde, S, Capece, L, Marti, M.A, Congia, S, Salter, M.D, Blouin, G.C, Estrin, D.A, Ascenzi, P, Moens, L, Bolognesi, M, Olson, J.S.
Deposit date:2010-07-08
Release date:2010-12-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Ligand Migration in the Apolar Tunnel of Cerebratulus Lacteus Mini-Hemoglobin.
J.Biol.Chem., 286, 2011
2XHZ
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BU of 2xhz by Molmil
Probing the active site of the sugar isomerase domain from E. coli arabinose-5-phosphate isomerase via X-ray crystallography
Descriptor: ARABINOSE 5-PHOSPHATE ISOMERASE
Authors:Gourlay, L.J, Sommaruga, S, Nardini, M, Sperandeo, P, Deho, G, Polissi, A, Bolognesi, M.
Deposit date:2010-06-24
Release date:2011-01-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Probing the Active Site of the Sugar Isomerase Domain from E. Coli Arabinose-5-Phosphate Isomerase Via X-Ray Crystallography.
Protein Sci., 19, 2010
4BJA
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BU of 4bja by Molmil
Globin-like protein Glb-12 from C.elegans
Descriptor: ACETATE ION, PROTEIN GLB-12, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:De Henau, S, Tilleman, L, Germani, F, Pauwels, M, Vlaeminck, C, Vanfleteren, J.R, Bert, W, Pesce, A, Nardini, M, Bolognesi, M, De Wael, K, Moens, L, Dewilde, S, Braeckman, B.P.
Deposit date:2013-04-17
Release date:2014-05-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:A Redox Signalling Globin is Essential for Reproduction in Caenorhabditis Elegans.
Nat.Commun., 6, 2015
4B3W
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BU of 4b3w by Molmil
Crystal structure of human cytoglobin H(E7)Q mutant
Descriptor: ACETATE ION, CYANIDE ION, CYTOGLOBIN, ...
Authors:Gabba, M, Abbruzzetti, S, Spyrakis, F, Forti, F, Bruno, S, Mozzarelli, A, Luque, F.J, Viappiani, C, Cozzini, P, Nardini, M, Germani, F, Bolognesi, M, Moens, L, Dewilde, S.
Deposit date:2012-07-26
Release date:2013-01-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Co Rebinding Kinetics and Molecular Dynamics Simulations Highlight Dynamic Regulation of Internal Cavities in Human Cytoglobin.
Plos One, 8, 2013
4B54
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BU of 4b54 by Molmil
The Structure of the inactive mutant G153R of LptC from E. coli
Descriptor: ACETATE ION, LIPOPOLYSACCHARIDE EXPORT SYSTEM PROTEIN LPTC
Authors:Villa, R, Martorana, A.M, Sperandeo, P, Kahne, D, Okuda, S, Gourlay, L.J, Nardini, M, Bolognesi, M, Polissi, A.
Deposit date:2012-08-02
Release date:2013-01-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The Escherichia Coli Lpt Transenvelope Protein Complex for Lipopolysaccharide Export is Assembled Via Conserved Structurally Homologous Domains.
J.Bacteriol., 195, 2013
4AVE
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BU of 4ave by Molmil
C.lacteus nerve Hb in the deoxy form
Descriptor: ACETATE ION, GLYCEROL, NEURAL HEMOGLOBIN, ...
Authors:Germani, F, Pesce, A, Venturini, A, Moens, L, Bolognesi, M, Dewilde, S, Nardini, M.
Deposit date:2012-05-25
Release date:2013-04-17
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:High Resolution Crystal Structures of the Cerebratulus Lacteus Mini-Hb in the Unligated and Carbomonoxy States.
Int.J.Mol.Sci., 13, 2012
4CNK
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BU of 4cnk by Molmil
L-Aminoacetone oxidase from Streptococcus oligofermentans belongs to a new 3-domain family of bacterial flavoproteins
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, L-AMINO ACID OXIDASE, ...
Authors:Molla, G, Nardini, M, Motta, P, D'Arrigo, P, Bolognesi, M, Pollegioni, L.
Deposit date:2014-01-23
Release date:2014-10-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Aminoacetone Oxidase from Streptococcus Oligofermentas Belongs to a New Three-Domain Family of Bacterial Flavoproteins.
Biochem.J., 464, 2014
4CNJ
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BU of 4cnj by Molmil
L-Aminoacetone oxidase from Streptococcus oligofermentans belongs to a new 3-domain family of bacterial flavoproteins
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, L-AMINO ACID OXIDASE
Authors:Molla, G, Nardini, M, Motta, P, D'Arrigo, P, Bolognesi, M, Pollegioni, L.
Deposit date:2014-01-23
Release date:2014-10-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Aminoacetone Oxidase from Streptococcus Oligofermentas Belongs to a New Three-Domain Family of Bacterial Flavoproteins.
Biochem.J., 464, 2014
3ZNQ
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BU of 3znq by Molmil
IN VITRO AND IN VIVO INHIBITION OF HUMAN D-AMINO ACID OXIDASE: REGULATION OF D-SERINE CONCENTRATION IN THE BRAIN
Descriptor: 3-PHENETHYL-4H-FURO[3,2-B]PYRROLE-5-CARBOXYLIC ACID, D-AMINO-ACID OXIDASE, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Hopkins, S.C, Heffernan, M.L.R, Saraswat, L.D, Bowen, C.A, Melnick, L, Hardy, L.W, Orsini, M.A, Allen, M.S, Koch, P, Spear, K.L, Foglesong, R.J, Soukri, M, Chytil, M, Fang, Q.K, Jones, S.W, Varney, M.A, Panatier, A, Oliet, S.H.R, Pollegioni, L, Piubelli, L, Molla, G, Nardini, M, Large, T.H.
Deposit date:2013-02-15
Release date:2013-05-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structural, Kinetic, and Pharmacodynamic Mechanisms of D-Amino Acid Oxidase Inhibition by Small Molecules.
J.Med.Chem., 56, 2013
3ZJH
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BU of 3zjh by Molmil
Trp(60)B9Ala mutation of M.acetivorans protoglobin in complex with cyanide
Descriptor: CYANIDE ION, PROTOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE
Authors:Pesce, A, Tilleman, L, Donne, J, Aste, E, Ascenzi, P, Ciaccio, C, Coletta, M, Moens, L, Viappiani, C, Dewilde, S, Bolognesi, M, Nardini, M.
Deposit date:2013-01-18
Release date:2013-06-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure and Haem-Distal Site Plasticity in Methanosarcina Acetivorans Protoglobin.
Plos One, 8, 2013
3ZNO
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BU of 3zno by Molmil
IN VITRO AND IN VIVO INHIBITION OF HUMAN D-AMINO ACID OXIDASE: REGULATION OF D-SERINE CONCENTRATION IN THE BRAIN
Descriptor: 4-(4-chlorophenethyl)-1H-pyrrole-2-carboxylic acid, D-AMINO-ACID OXIDASE, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Hopkins, S.C, Heffernan, M.L.R, Saraswat, L.D, Bowen, C.A, Melnick, L, Hardy, L.W, Orsini, M.A, Allen, M.S, Koch, P, Spear, K.L, Foglesong, R.J, Soukri, M, Chytil, M, Fang, Q.K, Jones, S.W, Varney, M.A, Panatier, A, Oliet, S.H.R, Pollegioni, L, Piubelli, L, Molla, G, Nardini, M, Large, T.H.
Deposit date:2013-02-15
Release date:2013-05-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural, Kinetic, and Pharmacodynamic Mechanisms of D-Amino Acid Oxidase Inhibition by Small Molecules.
J.Med.Chem., 56, 2013
3ZOL
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BU of 3zol by Molmil
M.acetivorans protoglobin F93Y mutant in complex with cyanide
Descriptor: CYANIDE ION, GLYCEROL, PROTOGLOBIN, ...
Authors:Tilleman, L, Abbruzzetti, S, Ciaccio, C, De Sanctis, G, Nardini, M, Pesce, A, Desmet, F, Moens, L, Van Doorslaer, S, Bruno, S, Bolognesi, M, Ascenzi, P, Coletta, M, Viappiani, C, Dewilde, S.
Deposit date:2013-02-22
Release date:2014-03-12
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Bases for the Regulation of Co Binding in the Archaeal Protoglobin from Methanosarcina Acetivorans.
Plos One, 10, 2015

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