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1V0T
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BU of 1v0t by Molmil
Phospholipase D from Streptomyces sp. strain PMF soaked with the product glycerophosphate
Descriptor: PHOSPHITE ION, PHOSPHOLIPASE D
Authors:Leiros, I, McSweeney, S, Hough, E.
Deposit date:2004-04-02
Release date:2004-06-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:The Reaction Mechanism of Phospholipase D from Streptomyces Sp. Strain Pmf. Snapshots Along the Reaction Pathway Reveal a Pentacoordinate Reaction Intermediate and an Unexpected Final Product
J.Mol.Biol., 339, 2004
1V0R
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BU of 1v0r by Molmil
Tungstate-inhibited phospholipase D from Streptomyces sp. strain PMF
Descriptor: PHOSPHOLIPASE D, TUNGSTATE(VI) ION
Authors:Leiros, I, McSweeney, S, Hough, E.
Deposit date:2004-04-01
Release date:2004-06-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Reaction Mechanism of Phospholipase D from Streptomyces Sp. Strain Pmf. Snapshots Along the Reaction Pathway Reveal a Pentacoordinate Reaction Intermediate and an Unexpected Final Product
J.Mol.Biol., 339, 2004
1V0V
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BU of 1v0v by Molmil
Phospholipase D from Streptomyces sp. strain PMF soaked with the substrate dibutyrylphosphatidylcholine.
Descriptor: PHOSPHITE ION, PHOSPHOLIPASE D
Authors:Leiros, I, McSweeney, S, Hough, E.
Deposit date:2004-04-02
Release date:2004-06-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Reaction Mechanism of Phospholipase D from Streptomyces Sp. Strain Pmf. Snapshots Along the Reaction Pathway Reveal a Pentacoordinate Reaction Intermediate and an Unexpected Final Product
J.Mol.Biol., 339, 2004
2YG8
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BU of 2yg8 by Molmil
Structure of an unusual 3-Methyladenine DNA Glycosylase II (Alka) from Deinococcus radiodurans
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, DNA-3-methyladenine glycosidase II, ...
Authors:Moe, E, Hall, D.R, Leiros, I, Talstad, V, Timmins, J, McSweeney, S.
Deposit date:2011-04-11
Release date:2011-04-20
Last modified:2018-12-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-function studies of an unusual 3-methyladenine DNA glycosylase II (AlkA) from Deinococcus radiodurans.
Acta Crystallogr. D Biol. Crystallogr., 68, 2012
7K3T
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BU of 7k3t by Molmil
Crystal Structure of SARS-CoV-2 Main Protease (3CLpro/Mpro) at 1.2 A Resolution and a Possible Capture of Zinc Binding Intermediate
Descriptor: 3C-like proteinase, DIMETHYL SULFOXIDE, ZINC ION
Authors:Andi, B, Kumaran, D, Kreitler, D.F, Soares, A.S, Shi, W, Jakoncic, J, Fuchs, M.R, Keereetaweep, J, Shanklin, J, McSweeney, S.
Deposit date:2020-09-13
Release date:2020-09-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Hepatitis C virus NS3/4A inhibitors and other drug-like compounds as covalent binders of SARS-CoV-2 main protease.
Sci Rep, 12, 2022
2V1C
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BU of 2v1c by Molmil
Crystal structure and mutational study of RecOR provide insight into its role in DNA repair
Descriptor: HYPOTHETICAL PROTEIN, RECOMBINATION PROTEIN RECR, ZINC ION
Authors:Timmins, J, Leiros, I, McSweeney, S.
Deposit date:2007-05-23
Release date:2007-07-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Crystal Structure and Mutational Study of Recor Provide Insight Into its Mode of DNA Binding.
Embo J., 26, 2007
2W4E
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BU of 2w4e by Molmil
Structure of an N-terminally truncated Nudix hydrolase DR2204 from Deinococcus radiodurans
Descriptor: MUTT/NUDIX FAMILY PROTEIN
Authors:Goncalves, A.M.D, Fioravanti, E, Stelter, M, McSweeney, S.
Deposit date:2008-11-25
Release date:2009-12-01
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of an N-Terminally Truncated Nudix Hydrolase Dr2204 from Deinococcus Radiodurans.
Acta Crystallogr.,Sect.F, 65, 2009
2YG9
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BU of 2yg9 by Molmil
Structure of an unusual 3-Methyladenine DNA Glycosylase II (Alka) from Deinococcus radiodurans
Descriptor: CHLORIDE ION, DNA-3-methyladenine glycosidase II, putative, ...
Authors:Moe, E, Hall, D.R, Leiros, I, Talstad, V, Timmins, J, McSweeney, S.
Deposit date:2011-04-11
Release date:2011-04-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure-function studies of an unusual 3-methyladenine DNA glycosylase II (AlkA) from Deinococcus radiodurans.
Acta Crystallogr. D Biol. Crystallogr., 68, 2012
2VRN
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BU of 2vrn by Molmil
The structure of the stress response protein DR1199 from Deinococcus radiodurans: a member of the DJ-1 superfamily
Descriptor: MAGNESIUM ION, PROTEASE I
Authors:Fioravanti, E, Dura, M.A, Lascoux, D, Micossi, E, McSweeney, S.
Deposit date:2008-04-09
Release date:2008-10-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure of the stress response protein DR1199 from Deinococcus radiodurans: a member of the DJ-1 superfamily.
Biochemistry, 47, 2008
1USP
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BU of 1usp by Molmil
Organic Hydroperoxide Resistance Protein from Deinococcus radiodurans
Descriptor: GLYCEROL, ORGANIC HYDROPEROXIDE RESISTANCE PROTEIN
Authors:Meunier-Jamin, C, Kapp, U, Leonard, G, McSweeney, S.
Deposit date:2003-11-27
Release date:2004-04-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Structure of the Organic Hydroperoxide Resistance Protein from Deinococcus Radiodurans: Do Conformational Changes Facilitate Recycling of the Redox Disulfide?
J.Biol.Chem., 279, 2004
1N7B
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BU of 1n7b by Molmil
RIP-Radiation-damage Induced Phasing
Descriptor: POTASSIUM ION, RNA/DNA (5'-R(*U)-D(P*(BGM))-R(P*AP*GP*GP*U)-3'), SPERMINE
Authors:Ravelli, R.B.G, Leiros, H.-K.S, Pan, B, Caffrey, M, McSweeney, S.
Deposit date:2002-11-13
Release date:2003-03-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Specific Radiation-Damage Can Be Used To Solve Macromolecular Crystal Structures
Structure, 11, 2003
1UTH
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BU of 1uth by Molmil
DntR from Burkholderia sp. strain DNT in complex with Thiocyanate
Descriptor: LYSR-TYPE REGULATORY PROTEIN, THIOCYANATE ION
Authors:Smirnova, I.A, Dian, C, Leonard, G.A, McSweeney, S, Birse, D, Brzezinski, P.
Deposit date:2003-12-09
Release date:2004-07-01
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Development of a Bacterial Biosensor for Nitrotoluenes: The Crystal Structure of the Transcriptional Regulator Dntr
J.Mol.Biol., 340, 2004
1UTB
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BU of 1utb by Molmil
DntR from Burkholderia sp. strain DNT
Descriptor: ACETATE ION, GLYCEROL, LYSR-TYPE REGULATORY PROTEIN
Authors:Smirnova, I.A, Dian, C, Leonard, G.A, McSweeney, S, Birse, D, Brzezinski, P.
Deposit date:2003-12-05
Release date:2004-07-01
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Development of a Bacterial Biosensor for Nitrotoluenes: The Crystal Structure of the Transcriptional Regulator Dntr
J.Mol.Biol., 340, 2004
1N7A
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BU of 1n7a by Molmil
RIP-Radiation-damage Induced Phasing
Descriptor: POTASSIUM ION, RNA/DNA (5'-R(*U)-D(P*(BGM))-R(P*AP*GP*GP*U)-3'), SPERMINE
Authors:Ravelli, R.B.G, Leiros, H.-K.S, Pan, B, Caffrey, M, McSweeney, S.
Deposit date:2002-11-13
Release date:2003-03-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Specific Radiation-Damage Can Be Used To Solve Macromolecular Crystal Structures
Structure, 11, 2003
1N6X
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BU of 1n6x by Molmil
RIP-phasing on Bovine Trypsin
Descriptor: BENZYLAMINE, CALCIUM ION, GLYCEROL, ...
Authors:Ravelli, R.B.G, Leiros, H.-K.S, Pan, B, Caffrey, M, McSweeney, S.
Deposit date:2002-11-12
Release date:2003-03-04
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Specific Radiation-Damage Can Be Used To Solve Macromolecular Crystal Structures
Structure, 11, 2003
1N6Y
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BU of 1n6y by Molmil
RIP-phasing on Bovine Trypsin
Descriptor: BENZYLAMINE, CALCIUM ION, GLYCEROL, ...
Authors:Ravelli, R.B.G, Leiros, H.-K.S, Pan, B, Caffrey, M, McSweeney, S.
Deposit date:2002-11-12
Release date:2003-03-04
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Specific Radiation-Damage Can Be Used To Solve Macromolecular Crystal Structures
Structure, 11, 2003
1SHQ
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BU of 1shq by Molmil
Crystal structure of shrimp alkaline phosphatase with magnesium in M3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, MAGNESIUM ION, SULFATE ION, ...
Authors:de Backer, M.M.E, McSweeney, S, Lindley, P.F, Hough, E.
Deposit date:2004-02-26
Release date:2004-08-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Ligand-binding and metal-exchange crystallographic studies on shrimp alkaline phosphatase.
Acta Crystallogr.,Sect.D, 60, 2004
1SHN
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BU of 1shn by Molmil
Crystal structure of shrimp alkaline phosphatase with phosphate bound
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, PHOSPHATE ION, SULFATE ION, ...
Authors:de Backer, M.M.E, McSweeney, S, Lindley, P.F, Hough, E.
Deposit date:2004-02-26
Release date:2004-08-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Ligand-binding and metal-exchange crystallographic studies on shrimp alkaline phosphatase.
Acta Crystallogr.,Sect.D, 60, 2004
7JYC
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BU of 7jyc by Molmil
Crystal Structure of SARS-CoV-2 Main Protease (3CLpro/Mpro) in Complex with Covalent Inhibitor Narlaprevir
Descriptor: (1R,2S,5S)-3-[N-({1-[(tert-butylsulfonyl)methyl]cyclohexyl}carbamoyl)-3-methyl-L-valyl]-N-{(1S)-1-[(1R)-2-(cyclopropylamino)-1-hydroxy-2-oxoethyl]pentyl}-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-2-carboxamide, 3C-like proteinase, DIMETHYL SULFOXIDE, ...
Authors:Andi, B, Kumaran, D, Kreitler, D.F, Soares, A.S, Shi, W, Jakoncic, J, Fuchs, M.R, Keereetaweep, J, Shanklin, J, McSweeney, S.
Deposit date:2020-08-30
Release date:2020-09-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Hepatitis C virus NS3/4A inhibitors and other drug-like compounds as covalent binders of SARS-CoV-2 main protease.
Sci Rep, 12, 2022
7K6D
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BU of 7k6d by Molmil
SARS-CoV-2 Main Protease Co-Crystal Structure with Telaprevir Determined from Crystals Grown with 40 nL Acoustically Ejected Mpro Droplets at 1.48 A Resolution (Cryo-protected)
Descriptor: (1S,3aR,6aS)-2-[(2S)-2-({(2S)-2-cyclohexyl-2-[(pyrazin-2-ylcarbonyl)amino]acetyl}amino)-3,3-dimethylbutanoyl]-N-[(2R,3S)-1-(cyclopropylamino)-2-hydroxy-1-oxohexan-3-yl]octahydrocyclopenta[c]pyrrole-1-carboxamide, 3C-like proteinase, DIMETHYL SULFOXIDE
Authors:Kreitler, D.F, Andi, B, Kumaran, D, Soares, A.S, Shi, W, Jakoncic, J, Fuchs, M.R, Keereetaweep, J, Shanklin, J, McSweeney, S.
Deposit date:2020-09-19
Release date:2020-09-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Hepatitis C virus NS3/4A inhibitors and other drug-like compounds as covalent binders of SARS-CoV-2 main protease.
Sci Rep, 12, 2022
7K40
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BU of 7k40 by Molmil
Crystal Structure of SARS-CoV-2 Main Protease (3CLpro/Mpro) in Complex with Covalent Inhibitor Boceprevir at 1.35 A Resolution
Descriptor: 3C-like proteinase, DIMETHYL SULFOXIDE, boceprevir (bound form)
Authors:Kumaran, D, Andi, B, Kreitler, D.F, Soares, A.S, Shi, W, Jakoncic, J, Fuchs, M.R, Keereetaweep, J, Shanklin, J, McSweeney, S.
Deposit date:2020-09-14
Release date:2020-09-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Hepatitis C virus NS3/4A inhibitors and other drug-like compounds as covalent binders of SARS-CoV-2 main protease.
Sci Rep, 12, 2022
7K6E
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BU of 7k6e by Molmil
SARS-CoV-2 Main Protease Co-Crystal Structure with Telaprevir Determined from Crystals Grown with 40 nL Acoustically Ejected Mpro Droplets at 1.63 A Resolution (Direct Vitrification)
Descriptor: (1S,3aR,6aS)-2-[(2S)-2-({(2S)-2-cyclohexyl-2-[(pyrazin-2-ylcarbonyl)amino]acetyl}amino)-3,3-dimethylbutanoyl]-N-[(2R,3S)-1-(cyclopropylamino)-2-hydroxy-1-oxohexan-3-yl]octahydrocyclopenta[c]pyrrole-1-carboxamide, 3C-like proteinase, DIMETHYL SULFOXIDE
Authors:Kreitler, D.F, Andi, B, Kumaran, D, Soares, A.S, Shi, W, Jakoncic, J, Fuchs, M.R, Keereetaweep, J, Shanklin, J, McSweeney, S.
Deposit date:2020-09-19
Release date:2020-09-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Hepatitis C virus NS3/4A inhibitors and other drug-like compounds as covalent binders of SARS-CoV-2 main protease.
Sci Rep, 12, 2022
7MHN
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BU of 7mhn by Molmil
Ensemble refinement structure of SARS-CoV-2 main protease (Mpro) at 277 K
Descriptor: 3C-like proteinase, DIMETHYL SULFOXIDE, ZINC ION
Authors:Ebrahim, A, Riley, B.T, Kumaran, D, Andi, B, Fuchs, M.R, McSweeney, S, Keedy, D.A.
Deposit date:2021-04-15
Release date:2021-05-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.1908 Å)
Cite:The temperature-dependent conformational ensemble of SARS-CoV-2 main protease (M pro )
Iucrj, 9, 2022
7MHJ
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BU of 7mhj by Molmil
Crystal Structure of SARS-CoV-2 Main Protease (Mpro) at 298 K and High Humidity
Descriptor: 3C-like proteinase, ZINC ION
Authors:Ebrahim, A, Riley, B.T, Kumaran, D, Andi, B, Fuchs, M.R, McSweeney, S, Keedy, D.A.
Deposit date:2021-04-15
Release date:2021-05-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.0005 Å)
Cite:The tem-per-ature-dependent conformational ensemble of SARS-CoV-2 main protease (M pro ).
Iucrj, 9, 2022
7MHK
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Crystal Structure of Apo/Unliganded SARS-CoV-2 Main Protease (Mpro) at 310 K
Descriptor: 3C-like proteinase, DIMETHYL SULFOXIDE, ZINC ION
Authors:Ebrahim, A, Riley, B.T, Kumaran, D, Andi, B, Fuchs, M.R, McSweeney, S, Keedy, D.A.
Deposit date:2021-04-15
Release date:2021-05-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.9601 Å)
Cite:The tem-per-ature-dependent conformational ensemble of SARS-CoV-2 main protease (M pro ).
Iucrj, 9, 2022

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