Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4YLB
DownloadVisualize
BU of 4ylb by Molmil
Crystal Structure of A102D mutant of hsp14.1 from Sulfolobus solfatataricus P2
Descriptor: CHLORIDE ION, Heat shock protein Hsp20
Authors:Liu, L, Chen, J.Y, Yun, C.H.
Deposit date:2015-03-05
Release date:2015-11-04
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.501 Å)
Cite:Active-State Structures of a Small Heat-Shock Protein Revealed a Molecular Switch for Chaperone Function
Structure, 23, 2015
3GUN
DownloadVisualize
BU of 3gun by Molmil
T4 lysozyme M102E/L99A mutant with buried charge in apolar cavity--aniline binding
Descriptor: ANILINE, CALCIUM ION, CHLORIDE ION, ...
Authors:Liu, L, Matthews, B.W.
Deposit date:2009-03-30
Release date:2009-08-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Use of stabilizing mutations to engineer a charged group within a ligand-binding hydrophobic cavity in T4 lysozyme.
Biochemistry, 48, 2009
5ZNS
DownloadVisualize
BU of 5zns by Molmil
Insect chitin deacetylase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ZINC ION, ...
Authors:Liu, L, Zhou, Y, Yang, Q.
Deposit date:2018-04-10
Release date:2019-02-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.396 Å)
Cite:Structural and biochemical insights into the catalytic mechanisms of two insect chitin deacetylases of the carbohydrate esterase 4 family.
J. Biol. Chem., 294, 2019
5ZNT
DownloadVisualize
BU of 5znt by Molmil
Insect chitin deacetylase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ZINC ION, ...
Authors:Liu, L, Zhou, Y, Yang, Q.
Deposit date:2018-04-10
Release date:2019-02-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.979 Å)
Cite:Structural and biochemical insights into the catalytic mechanisms of two insect chitin deacetylases of the carbohydrate esterase 4 family.
J. Biol. Chem., 294, 2019
8WWD
DownloadVisualize
BU of 8wwd by Molmil
Crystal structure of (S)-DHPS dehydrogenase HpsP from Dinoroseobacter shibae DFL 12
Descriptor: ZINC ION, Zinc-containing alcohol dehydrogenase
Authors:Liu, L, Tang, K.
Deposit date:2023-10-25
Release date:2024-09-04
Last modified:2024-09-18
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Enantioselective transformation of phytoplankton-derived dihydroxypropanesulfonate by marine bacteria.
Isme J, 18, 2024
8WWE
DownloadVisualize
BU of 8wwe by Molmil
Crystal structure of (R)-DHPS dehydrogenase HpsN from Ruegeria pomeroyi DSS-3
Descriptor: (R)-DHPS dehydrogenase, SULFATE ION
Authors:Liu, L, Tang, K.
Deposit date:2023-10-25
Release date:2024-09-04
Last modified:2024-09-11
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Enantioselective transformation of phytoplankton-derived dihydroxypropanesulfonate by marine bacteria.
Isme J, 18, 2024
8WWF
DownloadVisualize
BU of 8wwf by Molmil
Crystal structure of (R)-DHPS dehydrogenase HpsO from Ruegeria pomeroyi DSS-3
Descriptor: (R)-DHPS dehydrogenase HpsO
Authors:Liu, L, Tang, K.
Deposit date:2023-10-25
Release date:2024-09-04
Last modified:2024-09-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Enantioselective transformation of phytoplankton-derived dihydroxypropanesulfonate by marine bacteria.
Isme J, 18, 2024
3CIY
DownloadVisualize
BU of 3ciy by Molmil
Mouse Toll-like receptor 3 ectodomain complexed with double-stranded RNA
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Liu, L, Botos, I, Wang, Y, Leonard, J.N, Shiloach, J, Segal, D.M, Davies, D.R.
Deposit date:2008-03-12
Release date:2008-05-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.41 Å)
Cite:Structural basis of toll-like receptor 3 signaling with double-stranded RNA.
Science, 320, 2008
3DN4
DownloadVisualize
BU of 3dn4 by Molmil
Iodobenzene binding in the hydrophobic cavity of T4 lysozyme L99A mutant
Descriptor: 2-HYDROXYETHYL DISULFIDE, Lysozyme, PHOSPHATE ION, ...
Authors:Liu, L, Matthews, B.W.
Deposit date:2008-07-01
Release date:2008-11-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Halogenated benzenes bound within a non-polar cavity in T4 lysozyme provide examples of I...S and I...Se halogen-bonding.
J.Mol.Biol., 385, 2009
3CIG
DownloadVisualize
BU of 3cig by Molmil
Crystal structure of mouse TLR3 ectodomain
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Liu, L, Botos, I, Wang, Y, Leonard, J.N, Shiloach, J, Segal, D.M, Davies, D.R.
Deposit date:2008-03-11
Release date:2008-05-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Structural basis of toll-like receptor 3 signaling with double-stranded RNA.
Science, 320, 2008
3DMX
DownloadVisualize
BU of 3dmx by Molmil
Benzene binding in the hydrophobic cavity of T4 lysozyme L99A mutant
Descriptor: 2-HYDROXYETHYL DISULFIDE, BENZENE, CHLORIDE ION, ...
Authors:Liu, L, Matthews, B.W.
Deposit date:2008-07-01
Release date:2009-01-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Halogenated benzenes bound within a non-polar cavity in T4 lysozyme provide examples of I...S and I...Se halogen-bonding
J.Mol.Biol., 385, 2009
3DN3
DownloadVisualize
BU of 3dn3 by Molmil
Iodopentafluorobenzene binding in the hydrophobic cavity of T4 lysozyme L99A mutant
Descriptor: 1,2,3,4,5-pentafluoro-6-iodobenzene, 2-HYDROXYETHYL DISULFIDE, Lysozyme, ...
Authors:Liu, L, Matthews, B.W.
Deposit date:2008-07-01
Release date:2008-11-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Halogenated benzenes bound within a non-polar cavity in T4 lysozyme provide examples of I...S and I...Se halogen-bonding.
J.Mol.Biol., 385, 2009
3DNA
DownloadVisualize
BU of 3dna by Molmil
Iodobenzene binding in the hydrophobic cavity of T4 lysozyme L99A mutant (seleno version)
Descriptor: 2-HYDROXYETHYL DISULFIDE, BETA-MERCAPTOETHANOL, CHLORIDE ION, ...
Authors:Liu, L, Matthews, B.W.
Deposit date:2008-07-01
Release date:2008-11-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Halogenated benzenes bound within a non-polar cavity in T4 lysozyme provide examples of I...S and I...Se halogen-bonding.
J.Mol.Biol., 385, 2009
3DN0
DownloadVisualize
BU of 3dn0 by Molmil
Pentafluorobenzene binding in the hydrophobic cavity of T4 lysozyme L99A mutant
Descriptor: 1,2,3,4,5-pentafluorobenzene, 2-HYDROXYETHYL DISULFIDE, CHLORIDE ION, ...
Authors:Liu, L, Matthews, B.W.
Deposit date:2008-07-01
Release date:2008-11-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Halogenated benzenes bound within a non-polar cavity in T4 lysozyme provide examples of I...S and I...Se halogen-bonding.
J.Mol.Biol., 385, 2009
3DMZ
DownloadVisualize
BU of 3dmz by Molmil
Hexafluorobenzene binding in the hydrophobic cavity of T4 lysozyme L99A mutant
Descriptor: 2-HYDROXYETHYL DISULFIDE, CHLORIDE ION, Lysozyme, ...
Authors:Liu, L, Matthews, B.W.
Deposit date:2008-07-01
Release date:2008-11-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Halogenated benzenes bound within a non-polar cavity in T4 lysozyme provide examples of I...S and I...Se halogen-bonding.
J.Mol.Biol., 385, 2009
5WYB
DownloadVisualize
BU of 5wyb by Molmil
Structure of Pseudomonas aeruginosa DspI
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, ACETATE ION, Probable enoyl-CoA hydratase/isomerase
Authors:Liu, L, Peng, C, Li, T, Li, C, He, L, Song, Y, Zhu, Y, Shen, Y, Bao, R.
Deposit date:2017-01-12
Release date:2018-01-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural and functional studies on Pseudomonas aeruginosa DspI: implications for its role in DSF biosynthesis.
Sci Rep, 8, 2018
3DMV
DownloadVisualize
BU of 3dmv by Molmil
Free of ligand binding in the hydrophobic cavity of T4 lysozyme L99A mutant
Descriptor: 2-HYDROXYETHYL DISULFIDE, BETA-MERCAPTOETHANOL, CHLORIDE ION, ...
Authors:Liu, L, Matthews, B.W.
Deposit date:2008-07-01
Release date:2008-11-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Halogenated benzenes bound within a non-polar cavity in T4 lysozyme provide examples of I...S and I...Se halogen-bonding.
J.Mol.Biol., 385, 2009
3DN2
DownloadVisualize
BU of 3dn2 by Molmil
Bromopentafluorobenzene binding in the hydrophobic cavity of T4 lysozyme L99A mutant
Descriptor: 1-bromo-2,3,4,5,6-pentafluorobenzene, 2-HYDROXYETHYL DISULFIDE, Lysozyme, ...
Authors:Liu, L, Matthews, B.W.
Deposit date:2008-07-01
Release date:2008-11-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Halogenated benzenes bound within a non-polar cavity in T4 lysozyme provide examples of I...S and I...Se halogen-bonding.
J.Mol.Biol., 385, 2009
3DN1
DownloadVisualize
BU of 3dn1 by Molmil
Chloropentafluorobenzene binding in the hydrophobic cavity of T4 lysozyme L99A mutant
Descriptor: 1-chloro-2,3,4,5,6-pentafluorobenzene, 2-HYDROXYETHYL DISULFIDE, CHLORIDE ION, ...
Authors:Liu, L, Matthews, B.W.
Deposit date:2008-07-01
Release date:2008-11-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Halogenated benzenes bound within a non-polar cavity in T4 lysozyme provide examples of I...S and I...Se halogen-bonding.
J.Mol.Biol., 385, 2009
3DN8
DownloadVisualize
BU of 3dn8 by Molmil
Iodopentafluorobenzene binding in the hydrophobic cavity of T4 lysozyme L99A mutant (seleno version)
Descriptor: 1,2,3,4,5-pentafluoro-6-iodobenzene, 2-HYDROXYETHYL DISULFIDE, BETA-MERCAPTOETHANOL, ...
Authors:Liu, L, Matthews, B.W.
Deposit date:2008-07-01
Release date:2008-11-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Halogenated benzenes bound within a non-polar cavity in T4 lysozyme provide examples of I...S and I...Se halogen-bonding.
J.Mol.Biol., 385, 2009
3DN6
DownloadVisualize
BU of 3dn6 by Molmil
1,3,5-trifluoro-2,4,6-trichlorobenzene binding in the hydrophobic cavity of T4 lysozyme L99A mutant
Descriptor: 1,3,5-trichloro-2,4,6-trifluorobenzene, 2-HYDROXYETHYL DISULFIDE, Lysozyme, ...
Authors:Liu, L, Matthews, B.W.
Deposit date:2008-07-01
Release date:2008-11-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Halogenated benzenes bound within a non-polar cavity in T4 lysozyme provide examples of I...S and I...Se halogen-bonding.
J.Mol.Biol., 385, 2009
3V0I
DownloadVisualize
BU of 3v0i by Molmil
Crystal structure of Ciona intestinalis voltage sensor-containing phosphatase (Ci-VSP), residues 256-576, E411F
Descriptor: SULFATE ION, Voltage-sensor containing phosphatase
Authors:Liu, L, Kohout, S.C, Xu, Q, Muller, S, Kimberlin, C, Isacoff, E.Y, Minor, D.L.
Deposit date:2011-12-08
Release date:2012-05-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:A glutamate switch controls voltage-sensitive phosphatase function.
Nat.Struct.Mol.Biol., 19, 2012
3V0D
DownloadVisualize
BU of 3v0d by Molmil
Crystal structure of Ciona intestinalis voltage sensor-containing phosphatase (Ci-VSP), residues 241-576(C363S)
Descriptor: PHOSPHATE ION, Voltage-sensor containing phosphatase
Authors:Liu, L, Kohout, S.C, Xu, Q, Muller, S, Kimberlin, C, Isacoff, E.Y, Minor, D.L.
Deposit date:2011-12-07
Release date:2012-05-09
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:A glutamate switch controls voltage-sensitive phosphatase function.
Nat.Struct.Mol.Biol., 19, 2012
3V0J
DownloadVisualize
BU of 3v0j by Molmil
Crystal structure of Ciona intestinalis voltage sensor-containing phosphatase (Ci-VSP), residues 241-576(C363S), Deletion of 401-405
Descriptor: PHOSPHATE ION, Voltage-sensor containing phosphatase
Authors:Liu, L, Kohout, S.C, Xu, Q, Muller, S, Kimberlin, C, Isacoff, E.Y, Minor, D.L.
Deposit date:2011-12-08
Release date:2012-05-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:A glutamate switch controls voltage-sensitive phosphatase function.
Nat.Struct.Mol.Biol., 19, 2012
3V0E
DownloadVisualize
BU of 3v0e by Molmil
Crystal structure of Ciona intestinalis voltage sensor-containing phosphatase (Ci-VSP), residues 256-576(C363S)
Descriptor: CHLORIDE ION, GLYCEROL, SULFATE ION, ...
Authors:Liu, L, Kohout, S.C, Xu, Q, Muller, S, Kimberlin, C, Isacoff, E.Y, Minor, D.L.
Deposit date:2011-12-07
Release date:2012-05-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:A glutamate switch controls voltage-sensitive phosphatase function.
Nat.Struct.Mol.Biol., 19, 2012

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon