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7MLB
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BU of 7mlb by Molmil
Crystal structure of Thermus thermophilus transcription initiation complex with 5nt RNA
Descriptor: DNA (5'-D(*TP*AP*TP*AP*AP*TP*GP*GP*AP*GP*GP*GP*AP*TP*GP*CP*AP*G)-3'), DNA (5'-D(P*CP*TP*GP*CP*AP*TP*CP*CP*CP*TP*GP*AP*GP*TP*G)-3'), DNA-directed RNA polymerase subunit alpha, ...
Authors:Liu, Y, Ebright, R.H.
Deposit date:2021-04-28
Release date:2022-02-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structural and mechanistic basis of reiterative transcription initiation.
Proc.Natl.Acad.Sci.USA, 119, 2022
7MLI
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BU of 7mli by Molmil
Crystal structure of Thermus thermophilus reiterative transcription complex with 5nt oligo-C RNA
Descriptor: DNA (5'-D(*TP*AP*TP*AP*AP*TP*GP*GP*GP*AP*GP*CP*TP*GP*CP*TP*AP*CP*GP*GP*AP*TP*G)-3'), DNA (5'-D(P*CP*AP*TP*CP*CP*GP*TP*AP*GP*GP*GP*CP*GP*GP*G)-3'), DNA-directed RNA polymerase subunit alpha, ...
Authors:Liu, Y, Ebright, R.H.
Deposit date:2021-04-28
Release date:2022-02-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structural and mechanistic basis of reiterative transcription initiation.
Proc.Natl.Acad.Sci.USA, 119, 2022
7MLJ
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BU of 7mlj by Molmil
Crystal structure of Thermus thermophilus reiterative transcription complex with 4nt oligo-G RNA
Descriptor: DNA (5'-D(*TP*AP*TP*AP*AP*TP*GP*GP*GP*AP*GP*CP*TP*GP*GP*CP*AP*CP*GP*GP*AP*TP*G)-3'), DNA (5'-D(P*CP*AP*TP*CP*CP*GP*TP*GP*CP*CP*CP*TP*GP*AP*G)-3'), DNA-directed RNA polymerase subunit alpha, ...
Authors:Liu, Y, Ebright, R.H.
Deposit date:2021-04-28
Release date:2022-02-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.75 Å)
Cite:Structural and mechanistic basis of reiterative transcription initiation.
Proc.Natl.Acad.Sci.USA, 119, 2022
9BCU
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BU of 9bcu by Molmil
Cryo-EM structure of Thermococcus kodakarensis FttA-dependent transcription pre-termination complex containing 52 nt RNA
Descriptor: DNA-directed RNA polymerase subunit A", DNA-directed RNA polymerase subunit A', DNA-directed RNA polymerase subunit B, ...
Authors:You, L, Ebright, R.H.
Deposit date:2024-04-09
Release date:2024-07-31
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:Structural basis of archaeal FttA-dependent transcription termination.
Nature, 2024
9BCT
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BU of 9bct by Molmil
Cryo-EM structure of Thermococcus kodakarensis FttA-dependent transcription pre-termination complex containing 44 nt RNA
Descriptor: DNA-directed RNA polymerase subunit A", DNA-directed RNA polymerase subunit A', DNA-directed RNA polymerase subunit B, ...
Authors:You, L, Ebright, R.H.
Deposit date:2024-04-09
Release date:2024-07-31
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Structural basis of archaeal FttA-dependent transcription termination.
Nature, 2024
7XR2
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BU of 7xr2 by Molmil
3.1 Angstrom cryoEM icosahedral reconstruction of mud crab reovirus
Descriptor: VP11, VP12, VP3
Authors:Zhang, Q, Gao, Y.
Deposit date:2022-05-09
Release date:2023-04-19
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:The structure of a 12-segmented dsRNA reovirus: New insights into capsid stabilization and organization.
Plos Pathog., 19, 2023
7XR3
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BU of 7xr3 by Molmil
3.4 Angstrom cryoEM D5 reconstruction of mud crab reovirus
Descriptor: VP1, VP3
Authors:Zhang, Q.F, Gao, Y.Z.
Deposit date:2022-05-09
Release date:2023-04-19
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:The structure of a 12-segmented dsRNA reovirus: New insights into capsid stabilization and organization.
Plos Pathog., 19, 2023
7UBK
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BU of 7ubk by Molmil
Transcription antitermination factor Qlambda, type-II crystal
Descriptor: 1,2-ETHANEDIOL, Antitermination protein Q, CHLORIDE ION, ...
Authors:Yin, Z, Ebright, R.H.
Deposit date:2022-03-15
Release date:2022-09-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:In transcription antitermination by Q lambda , NusA induces refolding of Q lambda to form a nozzle that extends the RNA polymerase RNA-exit channel.
Proc.Natl.Acad.Sci.USA, 119, 2022
7UBJ
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BU of 7ubj by Molmil
Transcription antitermination factor Qlambda, type-I crystal
Descriptor: 1,2-ETHANEDIOL, Antitermination protein Q, CHLORIDE ION, ...
Authors:Yin, Z, Ebright, R.H.
Deposit date:2022-03-15
Release date:2022-09-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:In transcription antitermination by Q lambda , NusA induces refolding of Q lambda to form a nozzle that extends the RNA polymerase RNA-exit channel.
Proc.Natl.Acad.Sci.USA, 119, 2022
7UBL
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BU of 7ubl by Molmil
Transcription antitermination factor Qlambda in complex with Q-lambda-binding-element DNA
Descriptor: 1,2-ETHANEDIOL, Antitermination protein Q, DNA (5'-D(P*CP*AP*CP*CP*CP*AP*AP*TP*TP*TP*TP*AP*TP*TP*CP*AP*AP*TP*G)-3'), ...
Authors:Yin, Z, Ebright, R.H.
Deposit date:2022-03-15
Release date:2022-09-28
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.177 Å)
Cite:In transcription antitermination by Q lambda , NusA induces refolding of Q lambda to form a nozzle that extends the RNA polymerase RNA-exit channel.
Proc.Natl.Acad.Sci.USA, 119, 2022
7UBM
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BU of 7ubm by Molmil
Transcription antitermination complex: "pre-engaged" Qlambda-loading complex
Descriptor: Antitermination protein Q, DNA (52-MER), DNA (53-MER), ...
Authors:Yin, Z, Ebright, R.H.
Deposit date:2022-03-15
Release date:2022-09-28
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:In transcription antitermination by Q lambda , NusA induces refolding of Q lambda to form a nozzle that extends the RNA polymerase RNA-exit channel.
Proc.Natl.Acad.Sci.USA, 119, 2022
7UBN
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BU of 7ubn by Molmil
Transcription antitermination complex: NusA-containing "engaged" Qlambda-loading complex
Descriptor: Antitermination protein, DNA (52-MER), DNA (53-MER), ...
Authors:Yin, Z, Ebright, R.H.
Deposit date:2022-03-15
Release date:2022-09-28
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.36 Å)
Cite:In transcription antitermination by Q lambda , NusA induces refolding of Q lambda to form a nozzle that extends the RNA polymerase RNA-exit channel.
Proc.Natl.Acad.Sci.USA, 119, 2022
6P18
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BU of 6p18 by Molmil
Q21 transcription antitermination complex: loading complex
Descriptor: DNA (67-MER) fragment carrying phage-21 pR' promoter and pause element, nontemplate strand, template strand, ...
Authors:Yin, Z, Ebright, R.H.
Deposit date:2019-05-19
Release date:2019-06-26
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural basis of Q-dependent antitermination.
Proc.Natl.Acad.Sci.USA, 116, 2019
6P1B
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BU of 6p1b by Molmil
Transcription antitermination factor Q21
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Q protein
Authors:Yin, Z, Ebright, R.H.
Deposit date:2019-05-19
Release date:2019-06-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.942 Å)
Cite:Structural basis of Q-dependent antitermination.
Proc.Natl.Acad.Sci.USA, 116, 2019
6P1A
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BU of 6p1a by Molmil
Transcription antitermination factor Q21 in complex with Q21-binding-element DNA
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DNA (5'-D(*CP*TP*TP*GP*CP*TP*CP*AP*TP*TP*TP*GP*CP*TP*CP*AP*AP*TP*GP*AP*G)-3'), ...
Authors:Yin, Z, Ebright, R.H.
Deposit date:2019-05-19
Release date:2019-06-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.837 Å)
Cite:Structural basis of Q-dependent antitermination.
Proc.Natl.Acad.Sci.USA, 116, 2019
6P1C
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BU of 6p1c by Molmil
Transcription antitermination factor Q21, SeMet-derivative
Descriptor: CHLORIDE ION, Q protein
Authors:Yin, Z, Ebright, R.H.
Deposit date:2019-05-19
Release date:2019-06-26
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.005 Å)
Cite:Structural basis of Q-dependent antitermination.
Proc.Natl.Acad.Sci.USA, 116, 2019
6MV9
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BU of 6mv9 by Molmil
X-ray crystal structure of Bacillus subtilis ribonucleotide reductase NrdE alpha subunit with TTP and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Ribonucleoside-diphosphate reductase, ...
Authors:Thomas, W.C, Brooks, F.P, Bacik, J.P, Ando, N.
Deposit date:2018-10-24
Release date:2019-06-19
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Convergent allostery in ribonucleotide reductase.
Nat Commun, 10, 2019
6MT9
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BU of 6mt9 by Molmil
X-ray crystal structure of Bacillus subtilis ribonucleotide reductase NrdE alpha subunit with TTP, ATP, and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Thomas, W.C, Brooks, F.P, Bacik, J.P, Ando, N.
Deposit date:2018-10-19
Release date:2019-06-19
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Convergent allostery in ribonucleotide reductase.
Nat Commun, 10, 2019
6MVE
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BU of 6mve by Molmil
Reduced X-ray crystal structure of Bacillus subtilis ribonucleotide reductase NrdE alpha subunit with TTP, ATP, and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Thomas, W.C, Brooks, F.P, Bacik, J.P, Ando, N.
Deposit date:2018-10-25
Release date:2019-06-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Convergent allostery in ribonucleotide reductase.
Nat Commun, 10, 2019
6MYX
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BU of 6myx by Molmil
EM structure of Bacillus subtilis ribonucleotide reductase inhibited double-helical filament of NrdE alpha subunit with dATP
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, Ribonucleoside-diphosphate reductase
Authors:Thomas, W.C, Bacik, J.P, Chen, J.Z, Ando, N.
Deposit date:2018-11-02
Release date:2019-06-19
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (6 Å)
Cite:Convergent allostery in ribonucleotide reductase.
Nat Commun, 10, 2019
6P19
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BU of 6p19 by Molmil
Q21 transcription antitermination complex: loaded complex
Descriptor: DNA (123-MER) fragment carrying phage-21 pR' promoter, pause element, and transcribed region, ...
Authors:Yin, Z, Ebright, R.H.
Deposit date:2019-05-19
Release date:2019-06-26
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural basis of Q-dependent antitermination.
Proc.Natl.Acad.Sci.USA, 116, 2019
8URY
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BU of 8ury by Molmil
Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 30 nt long spacer, and fMet-tRNA in E-site and P-site of the ribosome
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S11, ...
Authors:Molodtsov, V, Wang, C, Ebright, R.H.
Deposit date:2023-10-27
Release date:2024-06-12
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis of RfaH-mediated transcription-translation coupling.
Nat.Struct.Mol.Biol., 2024
8UQM
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BU of 8uqm by Molmil
Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH in loaded state, NusA, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ...
Authors:Molodtsov, V, Wang, C, Ebright, R.H.
Deposit date:2023-10-24
Release date:2024-05-29
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (5.3 Å)
Cite:Structural basis of RfaH-mediated transcription-translation coupling.
Nat.Struct.Mol.Biol., 2024
8URI
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BU of 8uri by Molmil
Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 27 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ...
Authors:Molodtsov, V, Wang, C, Ebright, R.H.
Deposit date:2023-10-26
Release date:2024-05-29
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (5.3 Å)
Cite:Structural basis of RfaH-mediated transcription-translation coupling.
Nat.Struct.Mol.Biol., 2024
8UPO
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BU of 8upo by Molmil
Escherichia coli transcription-translation coupled complex class A (TTC-A) containing RfaH bound to ops signal, mRNA with a 21 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ...
Authors:Molodtsov, V, Wang, C, Ebright, R.H.
Deposit date:2023-10-23
Release date:2024-05-29
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (5.5 Å)
Cite:Structural basis of RfaH-mediated transcription-translation coupling.
Nat.Struct.Mol.Biol., 2024

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PDB entries from 2024-11-06

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