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5B0W
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BU of 5b0w by Molmil
Crystal structure of the 11-cis isomer of pharaonis halorhodopsin in the absence of halide ions
Descriptor: 2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE, BACTERIORUBERIN, Halorhodopsin, ...
Authors:Kouyama, T, Chan, S.K.
Deposit date:2015-11-11
Release date:2016-07-27
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of the 11-cis Isomer of Pharaonis Halorhodopsin: Structural Constraints on Interconversions among Different Isomeric States
Biochemistry, 55, 2016
1VSJ
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BU of 1vsj by Molmil
ASV INTEGRASE CORE DOMAIN WITH CD(II) COFACTORS
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CADMIUM ION, INTEGRASE
Authors:Bujacz, G, Alexandratos, J, Wlodawer, A.
Deposit date:1997-03-04
Release date:1997-05-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Binding of different divalent cations to the active site of avian sarcoma virus integrase and their effects on enzymatic activity.
J.Biol.Chem., 272, 1997
1VSI
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BU of 1vsi by Molmil
ASV INTEGRASE CORE DOMAIN WITH CA(II) COFACTOR
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, INTEGRASE
Authors:Bujacz, G, Alexandratos, J, Wlodawer, A.
Deposit date:1997-03-04
Release date:1997-05-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Binding of different divalent cations to the active site of avian sarcoma virus integrase and their effects on enzymatic activity.
J.Biol.Chem., 272, 1997
1VSH
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BU of 1vsh by Molmil
ASV INTEGRASE CORE DOMAIN WITH ZN(II) COFACTORS
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, INTEGRASE, ZINC ION
Authors:Bujacz, G, Alexandratos, J, Wlodawer, A.
Deposit date:1997-03-04
Release date:1997-05-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Binding of different divalent cations to the active site of avian sarcoma virus integrase and their effects on enzymatic activity.
J.Biol.Chem., 272, 1997
2D81
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BU of 2d81 by Molmil
PHB depolymerase (S39A) complexed with R3HB trimer
Descriptor: (1R)-3-{[(1R)-3-METHOXY-1-METHYL-3-OXOPROPYL]OXY}-1-METHYL-3-OXOPROPYL (3R)-3-HYDROXYBUTANOATE, 2-acetamido-2-deoxy-beta-D-glucopyranose, PHB depolymerase
Authors:Hisano, T, Kasuya, K, Saito, T, Iwata, T, Miki, K.
Deposit date:2005-11-30
Release date:2006-01-31
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:The Crystal Structure of Polyhydroxybutyrate Depolymerase from Penicillium funiculosum Provides Insights into the Recognition and Degradation of Biopolyesters
J.Mol.Biol., 356, 2006
2BDY
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BU of 2bdy by Molmil
thrombin in complex with inhibitor
Descriptor: Hirudin IIIB', N-(4-CARBAMIMIDOYL-BENZYL)-2-[2-HYDROXY-6-METHYL-3-(NAPHTHALENE-1-SULFONYLAMINO)-PHENYL]-ACETAMIDE, SODIUM ION, ...
Authors:Xue, Y.
Deposit date:2005-10-21
Release date:2006-10-24
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Phenolic P2/P3 core motif as thrombin inhibitors--design, synthesis, and X-ray co-crystal structure.
Bioorg.Med.Chem.Lett., 16, 2006
2D80
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BU of 2d80 by Molmil
Crystal structure of PHB depolymerase from Penicillium funiculosum
Descriptor: PHB depolymerase, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Hisano, T, Kasuya, K, Saito, T, Iwata, T, Miki, K.
Deposit date:2005-11-30
Release date:2006-01-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Crystal Structure of Polyhydroxybutyrate Depolymerase from Penicillium funiculosum Provides Insights into the Recognition and Degradation of Biopolyesters
J.Mol.Biol., 356, 2006
2E0C
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BU of 2e0c by Molmil
crystal structure of isocitrate dehydrogenase from Sulfolobus tokodaii strain7 at 2.0 A resolution
Descriptor: 409aa long hypothetical NADP-dependent isocitrate dehydrogenase
Authors:Kouyama, T.
Deposit date:2006-10-06
Release date:2007-10-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structures of the Putative Isocitrate Dehydrogenase fromSulfolobus tokodaiiStrain 7 in the Apo and NADP+-Bound Forms.
Archaea, 2018, 2018
2E5M
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BU of 2e5m by Molmil
Crystal structure of isocitrate dehydrogenase from Sulfolobus tokodaii strain 7
Descriptor: 409aa long hypothetical NADP-dependent isocitrate dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Kouyama, T, Kondo, H.
Deposit date:2006-12-22
Release date:2008-01-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structures of the Putative Isocitrate Dehydrogenase fromSulfolobus tokodaiiStrain 7 in the Apo and NADP+-Bound Forms.
Archaea, 2018, 2018
3VVK
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BU of 3vvk by Molmil
An M-like Reaction State of the azide-bound purple form of pharaonis halorhodopsin
Descriptor: 2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE, AZIDE ION, BACTERIORUBERIN, ...
Authors:Kouyama, T, Nakanishi, T.
Deposit date:2012-07-26
Release date:2013-06-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Large deformation of helix F during the photoreaction cycle of Pharaonis halorhodopsin in complex with azide
Biophys.J., 104, 2013
3WQJ
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BU of 3wqj by Molmil
Crystal structure of archaerhodopsin-2 at 1.8 angstrom resolution
Descriptor: (6E,10E,14E,18E)-2,6,10,15,19,23-hexamethyltetracosa-2,6,10,14,18,22-hexaene, 2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE, 2,3-DI-PHYTANYL-GLYCEROL, ...
Authors:Kouyama, T.
Deposit date:2014-01-27
Release date:2014-10-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of archaerhodopsin-2 at 1.8 angstrom resolution.
Acta Crystallogr.,Sect.D, 70, 2014
3A7K
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BU of 3a7k by Molmil
Crystal structure of halorhodopsin from Natronomonas pharaonis
Descriptor: 2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE, 2,3-DI-PHYTANYL-GLYCEROL, 3-PHOSPHORYL-[1,2-DI-PHYTANYL]GLYCEROL, ...
Authors:Kouyama, T.
Deposit date:2009-09-27
Release date:2009-12-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of the Light-Driven Chloride Pump Halorhodopsin from Natronomonas pharaonis.
J.Mol.Biol., 396, 2010
2ZFE
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BU of 2zfe by Molmil
Crystal structure of bacteriorhodopsin-xenon complex
Descriptor: 2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE, 2,3-DI-PHYTANYL-GLYCEROL, 3-O-sulfo-beta-D-galactopyranose-(1-6)-alpha-D-mannopyranose-(1-2)-alpha-D-glucopyranose, ...
Authors:Kouyama, T.
Deposit date:2007-12-31
Release date:2008-11-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Effect of xenon binding to a hydrophobic cavity on the proton pumping cycle in bacteriorhodopsin
J.Mol.Biol., 384, 2008
2N46
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BU of 2n46 by Molmil
EC-NMR Structure of Human H-RasT35S mutant protein Determined by Combining Evolutionary Couplings (EC) and Sparse NMR Data
Descriptor: GTPase HRas
Authors:Tang, Y, Huang, Y.J, Hopf, T.A, Sander, C, Marks, D, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2015-06-17
Release date:2015-07-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Protein structure determination by combining sparse NMR data with evolutionary couplings.
Nat.Methods, 12, 2015
2N42
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BU of 2n42 by Molmil
EC-NMR Structure of Human H-RasT35S mutant protein Determined by Combining Evolutionary Couplings (EC) and Sparse NMR Data
Descriptor: GTPase HRas
Authors:Tang, Y, Huang, Y.J, Hopf, T.A, Sander, C, Marks, D, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2015-06-16
Release date:2015-07-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Protein structure determination by combining sparse NMR data with evolutionary couplings.
Nat.Methods, 12, 2015

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