5XND
 
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1WMJ
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1TH5
 | | Solution structure of C-terminal domain of NifU-like protein from Oryza sativa | | Descriptor: | NifU1 | | Authors: | Kumeta, H, Ogura, K, Asayama, M, Katoh, S, Katoh, E, Inagaki, F. | | Deposit date: | 2004-06-01 | | Release date: | 2005-09-27 | | Last modified: | 2024-05-29 | | Method: | SOLUTION NMR | | Cite: | The NMR structure of the domain II of a chloroplastic NifU-like protein OsNifU1A.
J.Biomol.Nmr, 38, 2007
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1IY3
 | | Solution Structure of the Human lysozyme at 4 degree C | | Descriptor: | Lysozyme | | Authors: | Kumeta, H, Miura, A, Kobashigawa, Y, Miura, K, Oka, C, Nitta, K, Nemoto, N, Tsuda, S. | | Deposit date: | 2002-07-15 | | Release date: | 2002-07-31 | | Last modified: | 2024-11-13 | | Method: | SOLUTION NMR | | Cite: | Low-temperature-induced structural changes in human lysozyme elucidated by three-dimensional NMR spectroscopy
Biochemistry, 42, 2003
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1IY4
 | | Solution structure of the human lysozyme at 35 degree C | | Descriptor: | Lysozyme | | Authors: | Kumeta, H, Miura, A, Kobashigawa, Y, Miura, K, Oka, C, Nitta, K, Nemoto, N, Tsuda, S. | | Deposit date: | 2002-07-15 | | Release date: | 2002-07-31 | | Last modified: | 2024-11-13 | | Method: | SOLUTION NMR | | Cite: | Low-temperature-induced structural changes in human lysozyme elucidated by three-dimensional NMR spectroscopy
Biochemistry, 42, 2003
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2JPE
 | | FHA domain of NIPP1 | | Descriptor: | Nuclear inhibitor of protein phosphatase 1 | | Authors: | Kumeta, H, Ogura, K, Fujioka, Y, Tanuma, N, Kikuchi, K, Inagaki, F. | | Deposit date: | 2007-05-07 | | Release date: | 2007-05-15 | | Last modified: | 2024-05-08 | | Method: | SOLUTION NMR | | Cite: | The NMR structure of the NIPP1 FHA domain.
J.Biomol.Nmr, 40, 2008
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2KWC
 | | The NMR structure of the autophagy-related protein Atg8 | | Descriptor: | Autophagy-related protein 8 | | Authors: | Kumeta, H, Watanabe, M, Nakatogawa, H, Yamaguchi, M, Ogura, K, Adachi, W, Fujioka, Y, Noda, N.N, Ohsumi, Y, Inagaki, F. | | Deposit date: | 2010-04-05 | | Release date: | 2010-05-12 | | Last modified: | 2024-05-15 | | Method: | SOLUTION NMR | | Cite: | The NMR structure of the autophagy-related protein Atg8
J.Biomol.Nmr, 47, 2010
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2M63
 | | The protease-resistant N-terminal domain of TIR-domain containing adaptor molecule-1, TICAM-1 | | Descriptor: | TIR domain-containing adapter molecule 1 | | Authors: | Kumeta, H, Enokizono, Y, Sakakibara, H, Ogura, K, Matsumoto, M, Seya, T, Inagaki, F. | | Deposit date: | 2013-03-20 | | Release date: | 2014-03-05 | | Last modified: | 2024-05-15 | | Method: | SOLUTION NMR | | Cite: | The N-terminal domain of TIR domain-containing adaptor molecule-1, TICAM-1.
J.Biomol.Nmr, 58, 2014
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2KSV
 | | The NMR structure of protein-glutaminase from Chryseobacterium proteolyticum | | Descriptor: | Protein-glutaminase | | Authors: | Kumeta, H, Miwa, N, Ogura, K, Kai, Y, Mizukoshi, T, Shimba, N, Suzuki, E, Inagaki, F. | | Deposit date: | 2010-01-14 | | Release date: | 2010-02-16 | | Last modified: | 2024-10-30 | | Method: | SOLUTION NMR | | Cite: | The NMR structure of protein-glutaminase from Chryseobacterium proteolyticum.
J.Biomol.Nmr, 46, 2010
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2LX3
 | | 1H,13C,15N assignments for an isoform of the type III antifreeze protein from notched-fin eelpout | | Descriptor: | Type III antifreeze protein nfeAFP11 | | Authors: | Kumeta, H, Ogura, K, Nishimiya, Y, Miura, A, Inagaki, F, Tsuda, S. | | Deposit date: | 2012-08-12 | | Release date: | 2013-07-24 | | Last modified: | 2024-05-15 | | Method: | SOLUTION NMR | | Cite: | NMR structure note: a defective isoform and its activity-improved variant of a type III antifreeze protein from Zoarces elongates Kner
J.Biomol.Nmr, 55, 2013
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2LX2
 | | 1H,13C,15N assignments for an isoform of the type III antifreeze protein from notched-fin eelpout | | Descriptor: | Type III antifreeze protein nfeAFP11 | | Authors: | Kumeta, H, Ogura, K, Nishimiya, Y, Miura, A, Inagaki, F, Tsuda, S. | | Deposit date: | 2012-08-12 | | Release date: | 2013-07-24 | | Last modified: | 2024-05-15 | | Method: | SOLUTION NMR | | Cite: | NMR structure note: a defective isoform and its activity-improved variant of a type III antifreeze protein from Zoarces elongates Kner
J.Biomol.Nmr, 55, 2013
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2LI5
 | | NMR structure of Atg8-Atg7C30 complex | | Descriptor: | Autophagy-related protein 8, Ubiquitin-like modifier-activating enzyme ATG7 | | Authors: | Kumeta, H, Satoo, K, Noda, N.N, Fujioka, Y, Ogura, K, Nakatogawa, H, Ohsumi, Y, Inagaki, F. | | Deposit date: | 2011-08-23 | | Release date: | 2011-11-16 | | Last modified: | 2024-05-15 | | Method: | SOLUTION NMR | | Cite: | Structural basis of Atg8 activation by a homodimeric E1, Atg7.
Mol.Cell, 44, 2011
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2LDR
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2KE4
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2KBT
 | | Attachment of an NMR-invisible solubility enhancement tag (INSET) using a sortase-mediated protein ligation method | | Descriptor: | Proto-oncogene vav,Immunoglobulin G-binding protein G | | Authors: | Kumeta, H, Kobashigawa, Y, Ogura, K, Inagaki, F. | | Deposit date: | 2008-12-07 | | Release date: | 2009-02-03 | | Last modified: | 2024-05-15 | | Method: | SOLUTION NMR | | Cite: | Attachment of an NMR-invisible solubility enhancement tag using a sortase-mediated protein ligation method
J.Biomol.Nmr, 43, 2009
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8X0R
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7VOZ
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5ZR0
 | | Solution structure of peptidyl-prolyl cis/trans isomerase domain of Trigger Factor in complex with MBP | | Descriptor: | Maltose-binding periplasmic protein,Trigger factor | | Authors: | Kawagoe, S, Nakagawa, H, Kumeta, H, Ishimori, K, Saio, T. | | Deposit date: | 2018-04-21 | | Release date: | 2018-08-22 | | Last modified: | 2024-05-01 | | Method: | SOLUTION NMR | | Cite: | Structural insight into prolinecis/transisomerization of unfolded proteins catalyzed by the trigger factor chaperone.
J. Biol. Chem., 293, 2018
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7DEH
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4DVY
 | | Crystal structure of the Helicobacter pylori CagA oncoprotein | | Descriptor: | Cytotoxicity-associated immunodominant antigen | | Authors: | Hayashi, T, Senda, M, Morohashi, H, Higashi, H, Horio, M, Kashiba, Y, Nagase, L, Sasaya, D, Shimizu, T, Venugopalan, N, Kumeta, H, Noda, N, Inagaki, F, Senda, T, Hatakeyama, M. | | Deposit date: | 2012-02-23 | | Release date: | 2012-07-25 | | Last modified: | 2023-11-08 | | Method: | X-RAY DIFFRACTION (3.3 Å) | | Cite: | Tertiary Structure-Function Analysis Reveals the Pathogenic Signaling Potentiation Mechanism of Helicobacter pylori Oncogenic Effector CagA
Cell Host Microbe, 12, 2012
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4DVZ
 | | Crystal structure of the Helicobacter pylori CagA oncoprotein | | Descriptor: | Cytotoxicity-associated immunodominant antigen | | Authors: | Hayashi, T, Senda, M, Morohashi, H, Higashi, H, Horio, M, Kashiba, Y, Nagase, L, Sasaya, D, Shimizu, T, Venugopalan, N, Kumeta, H, Noda, N, Inagaki, F, Senda, T, Hatakeyama, M. | | Deposit date: | 2012-02-23 | | Release date: | 2012-07-25 | | Last modified: | 2024-03-20 | | Method: | X-RAY DIFFRACTION (3.19 Å) | | Cite: | Tertiary structure-function analysis reveals the pathogenic signaling potentiation mechanism of Helicobacter pylori oncogenic effector CagA
Cell Host Microbe, 12, 2012
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2KFJ
 | | Solution structure of the loop deletion mutant of PB1 domain of Cdc24p | | Descriptor: | Cell division control protein 24 | | Authors: | Ogura, K, Tandai, T, Yoshinaga, S, Kobashigawa, Y, Kumeta, H, Inagaki, F. | | Deposit date: | 2009-02-22 | | Release date: | 2009-10-06 | | Last modified: | 2024-05-29 | | Method: | SOLUTION NMR | | Cite: | NMR structure of the heterodimer of Bem1 and Cdc24 PB1 domains from Saccharomyces cerevisiae
J.Biochem., 146, 2009
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2JNV
 | | Solution structure of C-terminal domain of NifU-like protein from Oryza sativa | | Descriptor: | NifU-like protein 1, chloroplast | | Authors: | Saio, T, Ogura, K, Kumeta, H, Yokochi, M, Katoh, S, Katoh, E, Inagaki, F, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2007-02-06 | | Release date: | 2007-12-18 | | Last modified: | 2023-12-20 | | Method: | SOLUTION NMR | | Cite: | The cooperative role of OsCnfU-1A domain I and domain II in the iron sulphur cluster transfer process as revealed by NMR
J.Biochem.(Tokyo), 142, 2007
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3VQI
 | | Crystal structure of Kluyveromyces marxianus Atg5 | | Descriptor: | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Atg5, SULFATE ION | | Authors: | Yamaguchi, M, Noda, N.N, Yamamoto, H, Shima, T, Kumeta, H, Kobashigawa, Y, Akada, R, Ohsumi, Y, Inagaki, F. | | Deposit date: | 2012-03-24 | | Release date: | 2012-08-01 | | Last modified: | 2023-11-08 | | Method: | X-RAY DIFFRACTION (2.5 Å) | | Cite: | Structural insights into atg10-mediated formation of the autophagy-essential atg12-atg5 conjugate
Structure, 20, 2012
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2RQE
 | | Solution structure of the silkworm bGRP/GNBP3 N-terminal domain reveals the mechanism for b-1,3-glucan specific recognition | | Descriptor: | Beta-1,3-glucan-binding protein | | Authors: | Takahasi, K, Ochiai, M, Horiuchi, M, Kumeta, H, Ogura, K, Ashida, M, Inagaki, F. | | Deposit date: | 2009-04-22 | | Release date: | 2009-06-23 | | Last modified: | 2024-05-29 | | Method: | SOLUTION NMR | | Cite: | Solution structure of the silkworm betaGRP/GNBP3 N-terminal domain reveals the mechanism for beta-1,3-glucan-specific recognition.
Proc.Natl.Acad.Sci.USA, 106, 2009
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