Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5C8T
DownloadVisualize
BU of 5c8t by Molmil
Crystal structure of the SARS coronavirus nsp14-nsp10 complex with functional ligand SAM
Descriptor: Guanine-N7 methyltransferase, MAGNESIUM ION, Non-structural protein 10, ...
Authors:Ma, Y.Y, Wu, L.J, Zhang, R.G, Rao, Z.H.
Deposit date:2015-06-26
Release date:2015-07-15
Last modified:2015-08-12
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis and functional analysis of the SARS coronavirus nsp14-nsp10 complex
Proc.Natl.Acad.Sci.USA, 112, 2015
4Y16
DownloadVisualize
BU of 4y16 by Molmil
Crystal structure of the mCD1d/NC-aGC/iNKTCR ternary complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zajonc, D.M, Nemcovic, M.
Deposit date:2015-02-06
Release date:2015-06-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Lipid and Carbohydrate Modifications of alpha-Galactosylceramide Differently Influence Mouse and Human Type I Natural Killer T Cell Activation.
J.Biol.Chem., 290, 2015
1SX3
DownloadVisualize
BU of 1sx3 by Molmil
GroEL14-(ATPgammaS)14
Descriptor: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, POTASSIUM ION, ...
Authors:Chaudhry, C, Horwich, A.L, Brunger, A.T, Adams, P.D.
Deposit date:2004-03-30
Release date:2005-03-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Exploring the structural dynamics of the E.coli chaperonin GroEL using translation-libration-screw crystallographic refinement of intermediate states.
J.Mol.Biol., 342, 2004
4XNV
DownloadVisualize
BU of 4xnv by Molmil
The human P2Y1 receptor in complex with BPTU
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 1-[2-(2-tert-butylphenoxy)pyridin-3-yl]-3-[4-(trifluoromethoxy)phenyl]urea, CHOLESTEROL, ...
Authors:Zhang, D, Gao, Z, Jacobson, K, Han, G.W, Stevens, R, Zhao, Q, Wu, B, GPCR Network (GPCR)
Deposit date:2015-01-16
Release date:2015-04-01
Last modified:2020-02-05
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Two disparate ligand-binding sites in the human P2Y1 receptor
Nature, 520, 2015
5C8U
DownloadVisualize
BU of 5c8u by Molmil
Crystal structure of the SARS coronavirus nsp14-nsp10 complex
Descriptor: Guanine-N7 methyltransferase, MAGNESIUM ION, Non-structural protein 10, ...
Authors:Ma, Y.Y, Wu, L.J, Zhang, R.G, Rao, Z.H.
Deposit date:2015-06-26
Release date:2015-07-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.401 Å)
Cite:Structural basis and functional analysis of the SARS coronavirus nsp14-nsp10 complex
Proc.Natl.Acad.Sci.USA, 112, 2015
5YK5
DownloadVisualize
BU of 5yk5 by Molmil
structure of the human Lamtor4-Lamtor5 complex
Descriptor: Ragulator complex protein LAMTOR4, Ragulator complex protein LAMTOR5
Authors:Wu, G, Mu, Z.
Deposit date:2017-10-12
Release date:2018-12-12
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structural insight into the Ragulator complex which anchors mTORC1 to the lysosomal membrane
Cell Discov, 3, 2017
3G08
DownloadVisualize
BU of 3g08 by Molmil
Crystal structure of the alpha-galactosylceramide analog OCH in complex with mouse CD1d
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-2 microglobulin, ...
Authors:Zajonc, D.M.
Deposit date:2009-01-27
Release date:2009-12-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Mechanisms for glycolipid antigen-driven cytokine polarization by Valpha14i NKT cells.
J.Immunol., 184, 2010
5Z96
DownloadVisualize
BU of 5z96 by Molmil
Structure of the mouse TRPC4 ion channel
Descriptor: 2-(HEXADECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYL HEXADECANOATE, CHOLESTEROL HEMISUCCINATE, SODIUM ION, ...
Authors:Duan, J, Li, Z, Li, J, Zhang, J.
Deposit date:2018-02-02
Release date:2018-04-18
Last modified:2018-08-29
Method:ELECTRON MICROSCOPY (3.28 Å)
Cite:Structure of the mouse TRPC4 ion channel.
Nat Commun, 9, 2018
8XCG
DownloadVisualize
BU of 8xcg by Molmil
Tail tip complex of bacteriophage lambda in the open state
Descriptor: IRON/SULFUR CLUSTER, Tail tip assembly protein I, Tail tip protein L, ...
Authors:Ge, X.F, Wang, J.W.
Deposit date:2023-12-09
Release date:2024-05-01
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.46 Å)
Cite:Structural mechanism of bacteriophage lambda tail's interaction with the bacterial receptor.
Nat Commun, 15, 2024
8XCI
DownloadVisualize
BU of 8xci by Molmil
Open state of central tail fiber of bacteriophage lambda upon binding to LamB
Descriptor: Tip attachment protein J
Authors:Ge, X.F, Wang, J.W.
Deposit date:2023-12-09
Release date:2024-05-01
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.57 Å)
Cite:Structural mechanism of bacteriophage lambda tail's interaction with the bacterial receptor.
Nat Commun, 15, 2024
8XCK
DownloadVisualize
BU of 8xck by Molmil
Closed state of central tail fiber of bacteriophage lambda
Descriptor: Peptidyl-prolyl cis-trans isomerase A, Tip attachment protein J
Authors:Ge, X.F, Wang, J.W.
Deposit date:2023-12-09
Release date:2024-05-01
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.75 Å)
Cite:Structural mechanism of bacteriophage lambda tail's interaction with the bacterial receptor.
Nat Commun, 15, 2024
8XCJ
DownloadVisualize
BU of 8xcj by Molmil
Open State of central tail fiber of bacteriophage lambda upon binding to LamB (gpJ713-LamB complex)
Descriptor: Maltoporin, Tip attachment protein J
Authors:Ge, X.F, Wang, J.W.
Deposit date:2023-12-09
Release date:2024-05-01
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:Structural mechanism of bacteriophage lambda tail's interaction with the bacterial receptor.
Nat Commun, 15, 2024
4KDC
DownloadVisualize
BU of 4kdc by Molmil
Crystal Structure of UBIG
Descriptor: 3-demethylubiquinone-9 3-methyltransferase
Authors:Zhu, Y, Teng, M, Li, X.
Deposit date:2013-04-24
Release date:2014-04-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Structural and biochemical studies reveal UbiG/Coq3 as a class of novel membrane-binding proteins.
Biochem. J., 470, 2015
5ZVS
DownloadVisualize
BU of 5zvs by Molmil
Structure of RNA polymerase complex and genome within a dsRNA virus provides insights into the mechanisms of transcription and assembly
Descriptor: Putative core protein NTPase/VP5, VP2, VP3
Authors:Liu, H, Fang, Q, Cheng, L.
Deposit date:2018-05-12
Release date:2018-07-04
Last modified:2018-07-25
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure of RNA polymerase complex and genome within a dsRNA virus provides insights into the mechanisms of transcription and assembly.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
3G0Y
DownloadVisualize
BU of 3g0y by Molmil
Structure of E. coli FabF(C163Q) in complex with dihydroplatensimycin
Descriptor: 3-({3-[(1S,4aS,6S,7S,9S,9aR)-1,6-dimethyl-2-oxodecahydro-6,9-epoxy-4a,7-methanobenzo[7]annulen-1-yl]propanoyl}amino)-2,4-dihydroxybenzoic acid, 3-oxoacyl-[acyl-carrier-protein] synthase 2
Authors:Soisson, S.M, Parthasarathy, G.
Deposit date:2009-01-29
Release date:2009-03-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Synthesis and biological evaluation of platensimycin analogs.
Bioorg.Med.Chem.Lett., 19, 2009
3T7K
DownloadVisualize
BU of 3t7k by Molmil
Complex structure of Rtt107p and phosphorylated histone H2A
Descriptor: Histone H2A.1, Regulator of Ty1 transposition protein 107
Authors:Li, X, Li, F, Wu, J, Shi, Y.
Deposit date:2011-07-30
Release date:2012-02-15
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.028 Å)
Cite:Structure of C-terminal Tandem BRCT Repeats of Rtt107 Protein Reveals Critical Role in Interaction with Phosphorylated Histone H2A during DNA Damage Repair
J.Biol.Chem., 287, 2012
3HPG
DownloadVisualize
BU of 3hpg by Molmil
Visna virus integrase (residues 1-219) in complex with LEDGF IBD: examples of open integrase dimer-dimer interfaces
Descriptor: Integrase, PC4 and SFRS1-interacting protein, ZINC ION
Authors:Hare, S, Labeja, A, Cherepanov, P.
Deposit date:2009-06-04
Release date:2009-07-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.28 Å)
Cite:Structural basis for functional tetramerization of lentiviral integrase
Plos Pathog., 5, 2009
5ZVT
DownloadVisualize
BU of 5zvt by Molmil
Structure of RNA polymerase complex and genome within a dsRNA virus provides insights into the mechanisms of transcription and assembly
Descriptor: C-terminus of outer capsid protein VP5, Core protein VP6, MYRISTIC ACID, ...
Authors:Liu, H, Fang, Q, Cheng, L.
Deposit date:2018-05-12
Release date:2018-07-04
Last modified:2018-07-25
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of RNA polymerase complex and genome within a dsRNA virus provides insights into the mechanisms of transcription and assembly.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
8XOU
DownloadVisualize
BU of 8xou by Molmil
Prohead portal vertex of bacteriophage lambda
Descriptor: Major capsid protein, Portal protein B
Authors:Wang, J.W, Gu, Z.W.
Deposit date:2024-01-02
Release date:2024-04-10
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (5.58 Å)
Cite:Structural morphing in the viral portal vertex of bacteriophage lambda.
J.Virol., 98, 2024
8XQB
DownloadVisualize
BU of 8xqb by Molmil
Mature virion portal vertex of bacteriophage lambda
Descriptor: Capsid decoration protein, Head completion protein, Head-tail connector protein FII, ...
Authors:Wang, J.W, Gu, Z.W.
Deposit date:2024-01-05
Release date:2024-04-10
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (4.07 Å)
Cite:Structural morphing in the viral portal vertex of bacteriophage lambda.
J.Virol., 98, 2024
3G11
DownloadVisualize
BU of 3g11 by Molmil
Structure of E. coli FabF(C163Q) in complex with dihydrophenyl platensimycin
Descriptor: 3-({3-[(1S,4S,4aS,6S,7S,9S,9aR)-1,6-dimethyl-2-oxo-4-phenyldecahydro-6,9-epoxy-4a,7-methanobenzo[7]annulen-1-yl]propanoyl}amino)-2,4-dihydroxybenzoic acid, 3-oxoacyl-[acyl-carrier-protein] synthase 2
Authors:Soisson, S.M, Parthasarathy, G.
Deposit date:2009-01-29
Release date:2009-03-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Synthesis and biological evaluation of platensimycin analogs.
Bioorg.Med.Chem.Lett., 19, 2009
4Y4F
DownloadVisualize
BU of 4y4f by Molmil
Crystal structure of the mCD1d/GCK127/iNKTCR ternary complex
Descriptor: (1R)-1,5-anhydro-1-[(1E,3S,4S,5R)-4,5-dihydroxy-3-(nonacosanoylamino)nonadec-1-en-1-yl]-D-galactitol, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zajonc, D.M, Yu, E.D.
Deposit date:2015-02-10
Release date:2015-05-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.19 Å)
Cite:Structural modifications of alphaGalCer in both lipid and carbohydrate moiety influence activation of murine and human iNKT cells
To Be Published
6AGI
DownloadVisualize
BU of 6agi by Molmil
Crystal Structure of EFHA2 in Ca-binding State
Descriptor: CALCIUM ION, Calcium uptake protein 3, mitochondrial, ...
Authors:Yangfei, X, Xue, Y, Yuequan, S.
Deposit date:2018-08-11
Release date:2019-01-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.799 Å)
Cite:Dimerization of MICU Proteins Controls Ca2+Influx through the Mitochondrial Ca2+Uniporter.
Cell Rep, 26, 2019
7UFI
DownloadVisualize
BU of 7ufi by Molmil
VchTnsC AAA+ ATPase with DNA, single heptamer
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA (5'-D(P*CP*TP*CP*CP*AP*GP*TP*AP*CP*AP*GP*CP*GP*CP*GP*GP*CP*TP*GP*AP*A)-3'), DNA (5'-D(P*TP*TP*CP*AP*GP*CP*CP*GP*CP*GP*CP*TP*GP*TP*AP*CP*TP*GP*GP*AP*G)-3'), ...
Authors:Fernandez, I.S, Sternberg, S.H.
Deposit date:2022-03-22
Release date:2022-06-08
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Selective TnsC recruitment enhances the fidelity of RNA-guided transposition.
Nature, 609, 2022
7UFM
DownloadVisualize
BU of 7ufm by Molmil
VchTnsC AAA+ with DNA (double heptamer)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA (36-MER), VchTnsC
Authors:Fernandez, I.S, Sternberg, S.H.
Deposit date:2022-03-22
Release date:2022-06-08
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Selective TnsC recruitment enhances the fidelity of RNA-guided transposition.
Nature, 609, 2022

223532

數據於2024-08-07公開中

PDB statisticsPDBj update infoContact PDBjnumon