Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7UYC
DownloadVisualize
BU of 7uyc by Molmil
Inhibitor bound VIM1
Descriptor: (2P)-4'-(piperidin-4-yl)-4-[(piperidin-4-yl)methyl]-2-(1H-tetrazol-5-yl)[1,1'-biphenyl]-3-sulfonamide, Beta-lactamase VIM-1, MAGNESIUM ION, ...
Authors:Fischmann, T.O, Scapin, G.
Deposit date:2022-05-06
Release date:2023-05-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.02 Å)
Cite:Structure Guided Discovery of Novel Pan Metallo-beta-Lactamase Inhibitors with Improved Gram-Negative Bacterial Cell Penetration.
J.Med.Chem., 67, 2024
8X8G
DownloadVisualize
BU of 8x8g by Molmil
Crystal structure of EndoSz mutant D234M, from Streptococcus equi subsp. Zooepidemicus Sz105, in complex with oligosaccharide G2S2-oxazoline
Descriptor: 2-METHYL-4,5-DIHYDRO-(1,2-DIDEOXY-ALPHA-D-GLUCOPYRANOSO)[2,1-D]-1,3-OXAZOLE, CALCIUM ION, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose, ...
Authors:Guan, H.H, Lin, C.C, Hsieh, Y.C, Chen, C.J.
Deposit date:2023-11-27
Release date:2024-07-03
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Structure-Based High-Efficiency Homogeneous Antibody Platform by Endoglycosidase Sz Provides Insights into Its Transglycosylation Mechanism.
Jacs Au, 4, 2024
5TRL
DownloadVisualize
BU of 5trl by Molmil
Crystal structure of human GCN5 histone acetyltransferase domain
Descriptor: Histone acetyltransferase KAT2A, SUCCINYL-COENZYME A
Authors:Guo, Y.R, Tao, Y.J.
Deposit date:2016-10-26
Release date:2017-12-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.299 Å)
Cite:KAT2A coupled with the alpha-KGDH complex acts as a histone H3 succinyltransferase.
Nature, 552, 2017
5TRM
DownloadVisualize
BU of 5trm by Molmil
Crystal structure of human GCN5 histone acetyltransferase domain
Descriptor: Histone acetyltransferase KAT2A
Authors:Guo, Y.R, Tao, Y.J.
Deposit date:2016-10-26
Release date:2017-12-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:KAT2A coupled with the alpha-KGDH complex acts as a histone H3 succinyltransferase.
Nature, 552, 2017
5V3M
DownloadVisualize
BU of 5v3m by Molmil
mouseZFP568-ZnF1-11 in complex with DNA
Descriptor: DNA (28-MER), ZINC ION, Zinc finger protein 568
Authors:Patel, A, Cheng, X.
Deposit date:2017-03-07
Release date:2018-03-07
Last modified:2019-09-18
Method:X-RAY DIFFRACTION (2.091 Å)
Cite:DNA Conformation Induces Adaptable Binding by Tandem Zinc Finger Proteins.
Cell, 173, 2018
5V3J
DownloadVisualize
BU of 5v3j by Molmil
mouseZFP568-ZnF1-10 in complex with DNA
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DNA (26-MER), MAGNESIUM ION, ...
Authors:Patel, A, Cheng, X.
Deposit date:2017-03-07
Release date:2018-03-07
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.064 Å)
Cite:DNA Conformation Induces Adaptable Binding by Tandem Zinc Finger Proteins.
Cell, 173, 2018
2E2F
DownloadVisualize
BU of 2e2f by Molmil
Solution structure of DSP
Descriptor: Diapausin
Authors:Kouno, T, Mizuguchi, M, Suzuki, K, Kawano, K.
Deposit date:2006-11-12
Release date:2007-11-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The structure of a novel insect peptide explains its Ca2+ channel blocking and antifungal activities
Biochemistry, 46, 2007
7D39
DownloadVisualize
BU of 7d39 by Molmil
FLR-apo
Descriptor: Cd1, FLAVIN MONONUCLEOTIDE
Authors:Hong, S, Yang, G.H, Zhang, P.
Deposit date:2020-09-18
Release date:2021-03-03
Method:X-RAY DIFFRACTION (2.198 Å)
Cite:Discovery of an ene-reductase for initiating flavone and flavonol catabolism in gut bacteria.
Nat Commun, 12, 2021
7D38
DownloadVisualize
BU of 7d38 by Molmil
flavone reductase
Descriptor: Cd1, FLAVIN MONONUCLEOTIDE, chrysin
Authors:Hong, S, Yang, G.H, Zhang, P.
Deposit date:2020-09-18
Release date:2021-03-03
Method:X-RAY DIFFRACTION (2.649 Å)
Cite:Discovery of an ene-reductase for initiating flavone and flavonol catabolism in gut bacteria.
Nat Commun, 12, 2021
7D3B
DownloadVisualize
BU of 7d3b by Molmil
flavone reductase
Descriptor: 2-(3,4-dihydroxyphenyl)-5,7-dihydroxy-4H-chromen-4-one, Cd1, FLAVIN MONONUCLEOTIDE
Authors:Hong, S, Yang, G.H, Zhang, P.
Deposit date:2020-09-18
Release date:2021-03-03
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Discovery of an ene-reductase for initiating flavone and flavonol catabolism in gut bacteria.
Nat Commun, 12, 2021
7D3A
DownloadVisualize
BU of 7d3a by Molmil
flavone reductase
Descriptor: 5,7-dihydroxy-2-(4-hydroxyphenyl)-4H-chromen-4-one, Cd1, FLAVIN MONONUCLEOTIDE
Authors:Hong, S, Yang, G.H, Zhang, P.
Deposit date:2020-09-18
Release date:2021-03-03
Last modified:2021-09-29
Method:X-RAY DIFFRACTION (2.552 Å)
Cite:Discovery of an ene-reductase for initiating flavone and flavonol catabolism in gut bacteria.
Nat Commun, 12, 2021
1GNS
DownloadVisualize
BU of 1gns by Molmil
SUBTILISIN BPN'
Descriptor: ACETONE, SUBTILISIN BPN'
Authors:Almog, O, Gallagher, D.T, Ladner, J.E, Strausberg, S, Alexander, P.
Deposit date:2001-10-06
Release date:2002-06-27
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis of Thermostability. Analysis of Stabilizing Mutations in Subtilisin Bpn'.
J.Biol.Chem., 277, 2002
7WGC
DownloadVisualize
BU of 7wgc by Molmil
Neutral Omicron Spike Trimer in complex with ACE2.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, Spike glycoprotein
Authors:Cui, Z.
Deposit date:2021-12-28
Release date:2022-06-22
Last modified:2022-07-13
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural and functional characterizations of infectivity and immune evasion of SARS-CoV-2 Omicron.
Cell, 185, 2022
7WG7
DownloadVisualize
BU of 7wg7 by Molmil
Acidic Omicron Spike Trimer
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Cui, Z.
Deposit date:2021-12-28
Release date:2022-06-22
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structural and functional characterizations of infectivity and immune evasion of SARS-CoV-2 Omicron.
Cell, 185, 2022
7WG9
DownloadVisualize
BU of 7wg9 by Molmil
Delta Spike Trimer(1 RBD Up)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Cui, Z.
Deposit date:2021-12-28
Release date:2022-06-22
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural and functional characterizations of infectivity and immune evasion of SARS-CoV-2 Omicron.
Cell, 185, 2022
7WGB
DownloadVisualize
BU of 7wgb by Molmil
Neutral Omicron Spike Trimer in complex with ACE2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, ...
Authors:Cui, Z.
Deposit date:2021-12-28
Release date:2022-06-22
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural and functional characterizations of infectivity and immune evasion of SARS-CoV-2 Omicron.
Cell, 185, 2022
7WG8
DownloadVisualize
BU of 7wg8 by Molmil
Delta Spike Trimer(3 RBD Down)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Cui, Z.
Deposit date:2021-12-28
Release date:2022-06-22
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural and functional characterizations of infectivity and immune evasion of SARS-CoV-2 Omicron.
Cell, 185, 2022
7WG6
DownloadVisualize
BU of 7wg6 by Molmil
Neutral Omicron Spike Trimer
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Cui, Z, Wang, X.
Deposit date:2021-12-28
Release date:2022-05-18
Last modified:2022-07-20
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural and functional characterizations of infectivity and immune evasion of SARS-CoV-2 Omicron.
Cell, 185, 2022
8I0C
DownloadVisualize
BU of 8i0c by Molmil
Crystal structure of Aldo-keto reductase 1C3 complexed with compound S0703
Descriptor: 1-[4-[3,5-bis(chloranyl)phenyl]-3-fluoranyl-phenyl]cyclopropane-1-carboxylic acid, Aldo-keto reductase family 1 member C3, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Jiang, J, He, S, Liu, Y, Fang, P, Sun, H.
Deposit date:2023-01-10
Release date:2023-09-20
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Development of Biaryl-Containing Aldo-Keto Reductase 1C3 (AKR1C3) Inhibitors for Reversing AKR1C3-Mediated Drug Resistance in Cancer Treatment.
J.Med.Chem., 66, 2023
1GNV
DownloadVisualize
BU of 1gnv by Molmil
CALCIUM INDEPENDENT SUBTILISIN BPN' MUTANT
Descriptor: SUBTILISIN BPN'
Authors:Almog, O, Gilliland, G.L.
Deposit date:2001-10-10
Release date:2002-06-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Basis of Thermostability. Analysis of Stabilizing Mutations in Subtilisin Bpn'.
J.Biol.Chem., 277, 2002
7WEA
DownloadVisualize
BU of 7wea by Molmil
SARS-CoV-2 Omicron variant spike protein in complex with two XGv347 binding to one close state RBD and one open state RBD
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Wang, X, Wang, L.
Deposit date:2021-12-23
Release date:2022-05-04
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Memory B cell repertoire from triple vaccinees against diverse SARS-CoV-2 variants.
Nature, 603, 2022
7WE8
DownloadVisualize
BU of 7we8 by Molmil
SARS-CoV-2 Omicron variant spike protein in complex with Fab XGv265
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of Fab 265, ...
Authors:Wang, X, Wang, L.
Deposit date:2021-12-23
Release date:2022-05-04
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Memory B cell repertoire from triple vaccinees against diverse SARS-CoV-2 variants.
Nature, 603, 2022
7WEC
DownloadVisualize
BU of 7wec by Molmil
SARS-CoV-2 Omicron variant spike protein with three XGv347 Fabs binding to three closed state RBDs
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Wang, X, Wang, L.
Deposit date:2021-12-23
Release date:2022-05-04
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Memory B cell repertoire from triple vaccinees against diverse SARS-CoV-2 variants.
Nature, 603, 2022
7WE7
DownloadVisualize
BU of 7we7 by Molmil
SARS-CoV-2 Omicron variant spike protein in complex with Fab XGv282
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of Fab 282, ...
Authors:Wang, X, Wang, L.
Deposit date:2021-12-23
Release date:2022-05-04
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Memory B cell repertoire from triple vaccinees against diverse SARS-CoV-2 variants.
Nature, 603, 2022
7WEE
DownloadVisualize
BU of 7wee by Molmil
SARS-CoV-2 Omicron variant spike RBD in complex with Fab XGv265
Descriptor: Spike glycoprotein, The heavy chain of Fab XGv265, The light chain of Fab XGv265
Authors:Wang, X, Wang, L.
Deposit date:2021-12-23
Release date:2022-05-04
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Memory B cell repertoire from triple vaccinees against diverse SARS-CoV-2 variants.
Nature, 603, 2022

223166

數據於2024-07-31公開中

PDB statisticsPDBj update infoContact PDBjnumon