Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4CQH
DownloadVisualize
BU of 4cqh by Molmil
Structure of Infrared Fluorescent Protein IFP2.0
Descriptor: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, BACTERIOPHYTOCHROME, SODIUM ION
Authors:Lafaye, C, Yu, D, Noirclerc-Savoye, M, Shu, X, Royant, A.
Deposit date:2014-02-17
Release date:2014-05-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:An Improved Monomeric Infrared Fluorescent Protein for Neuronal and Tumour Brain Imaging.
Nat.Commun., 5, 2014
3ZGF
DownloadVisualize
BU of 3zgf by Molmil
Crystal structure of the Fucosylgalactoside alpha N- acetylgalactosaminyltransferase (GTA, cisAB mutant L266G, G268A) in complex with in complex with NPE caged UDP-Gal (P2(1)2(1)2(1) space group)
Descriptor: 1-(2-NITROPHENYL)ETHYL UDP-GALACTOSE, HISTO-BLOOD GROUP ABO SYSTEM TRANSFERASE, MANGANESE (II) ION, ...
Authors:Jorgensen, R, Batot, G.O, Hindsgaul, O, Tanaka, H, Perez, S, Imberty, A, Breton, C, Royant, A, Palcic, M.M.
Deposit date:2012-12-17
Release date:2013-01-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.701 Å)
Cite:Structures of a Human Blood Group Glycosyltransferase in Complex with a Photo-Activatable Udp-Gal Derivative Reveal Two Different Binding Conformations
Acta Crystallogr.,Sect.F, 70, 2014
1TWQ
DownloadVisualize
BU of 1twq by Molmil
Crystal structure of the C-terminal PGN-binding domain of human PGRP-Ialpha in complex with PGN analog muramyl tripeptide
Descriptor: N-acetyl-beta-muramic acid, NICKEL (II) ION, muramyl tripeptide, ...
Authors:Guan, R, Roychowdury, A, Boons, G.-A, Mariuzza, R.A.
Deposit date:2004-07-01
Release date:2004-12-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for peptidoglycan binding by peptidoglycan recognition proteins
Proc.Natl.Acad.Sci.USA, 101, 2004
1GUE
DownloadVisualize
BU of 1gue by Molmil
SENSORY RHODOPSIN II
Descriptor: CHLORIDE ION, RETINAL, SENSORY RHODOPSIN II
Authors:Edman, K, Royant, A, Nollert, P, Maxwell, C.A, Pebay-Peyroula, E, Navarro, J, Neutze, R, Landau, E.M.
Deposit date:2002-01-24
Release date:2002-04-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Early Structural Rearrangements in the Photocycle of an Integral Membrane Sensory Receptor
Structure, 10, 2002
1GU8
DownloadVisualize
BU of 1gu8 by Molmil
SENSORY RHODOPSIN II
Descriptor: CHLORIDE ION, RETINAL, SENSORY RHODOPSIN II
Authors:Edman, K, Royant, A, Nollert, P, Maxwell, C.A, Pebay-Peyroula, E, Navarro, J, Neutze, R, Landau, E.M.
Deposit date:2002-01-24
Release date:2002-04-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Early Structural Rearrangements in the Photocycle of an Integral Membrane Sensory Receptor
Structure, 10, 2002
5FSS
DownloadVisualize
BU of 5fss by Molmil
Structure of thermolysin prepared by the 'soak-and-freeze' method under 40 bar of krypton pressure
Descriptor: CALCIUM ION, GLYCEROL, KRYPTON, ...
Authors:Lafumat, B, Mueller-Dieckmann, C, Colloc'h, N, Prange, T, Royant, A, van der Linden, P, Carpentier, P.
Deposit date:2016-01-07
Release date:2016-10-26
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Gas-Sensitive Biological Crystals Processed in Pressurized Oxygen and Krypton Atmospheres: Deciphering Gas Channels in Proteins Using a Novel `Soak-and-Freeze' Methodology.
J.Appl.Crystallogr., 49, 2016
5LNS
DownloadVisualize
BU of 5lns by Molmil
Crystal structure of Arabidopsis thaliana Pdx1-R5P complex
Descriptor: PHOSPHATE ION, Pyridoxal 5'-phosphate synthase subunit PDX1.3, RIBULOSE-5-PHOSPHATE
Authors:Rodrigues, M.J, Windeisen, V, Zhang, Y, Guedez, G, Weber, S, Strohmeier, M, Hanes, J.W, Royant, A, Evans, G, Sinning, I, Ealick, S.E, Begley, T.P, Tews, I.
Deposit date:2016-08-06
Release date:2017-01-18
Last modified:2017-02-22
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Lysine relay mechanism coordinates intermediate transfer in vitamin B6 biosynthesis.
Nat. Chem. Biol., 13, 2017
5LNU
DownloadVisualize
BU of 5lnu by Molmil
Crystal structure of Arabidopsis thaliana Pdx1-I320 complex
Descriptor: (4~{S})-4-azanyl-5-oxidanyl-pent-1-en-3-one, PHOSPHATE ION, Pyridoxal 5'-phosphate synthase subunit PDX1.3, ...
Authors:Rodrigues, M.J, Windeisen, V, Zhang, Y, Guedez, G, Weber, S, Strohmeier, M, Hanes, J.W, Royant, A, Evans, G, Sinning, I, Ealick, S.E, Begley, T.P, Tews, I.
Deposit date:2016-08-06
Release date:2017-01-18
Last modified:2017-02-22
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Lysine relay mechanism coordinates intermediate transfer in vitamin B6 biosynthesis.
Nat. Chem. Biol., 13, 2017
5LTP
DownloadVisualize
BU of 5ltp by Molmil
Structure of the Yellow-Green Fluorescent Protein mNeonGreen from Branchiostoma lanceolatum at the acidic pH 4.5
Descriptor: CHLORIDE ION, CITRATE ANION, mNeonGreen
Authors:Clavel, D, Gotthard, G, Royant, A.
Deposit date:2016-09-07
Release date:2016-12-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural analysis of the bright monomeric yellow-green fluorescent protein mNeonGreen obtained by directed evolution.
Acta Crystallogr D Struct Biol, 72, 2016
5LNW
DownloadVisualize
BU of 5lnw by Molmil
Crystal structure of Arabidopsis thaliana Pdx1-I320-G3P complex
Descriptor: 5-O-phosphono-beta-D-ribofuranose, GLYCEROL, Pyridoxal 5'-phosphate synthase subunit PDX1.3, ...
Authors:Rodrigues, M.J, Windeisen, V, Zhang, Y, Guedez, G, Weber, S, Strohmeier, M, Hanes, J.W, Royant, A, Evans, G, Sinning, I, Ealick, S.E, Begley, T.P, Tews, I.
Deposit date:2016-08-06
Release date:2017-01-18
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Lysine relay mechanism coordinates intermediate transfer in vitamin B6 biosynthesis.
Nat. Chem. Biol., 13, 2017
8A2V
DownloadVisualize
BU of 8a2v by Molmil
Room temperature structure of the ground state of AtPhot2LOV2 in space group P43212
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, FLAVIN MONONUCLEOTIDE, Phototropin-2
Authors:Engilberge, S, Caramello, N, Royant, A.
Deposit date:2022-06-06
Release date:2023-03-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Slow protein dynamics probed by time-resolved oscillation crystallography at room temperature.
Iucrj, 9, 2022
8A4E
DownloadVisualize
BU of 8a4e by Molmil
Room temperature structure of AtPhot2LOV2 in a photostationary equilibrium
Descriptor: 6-(3-TETRADECANOIC ACID) FLAVINE MONONUCLEOTIDE, FLAVIN MONONUCLEOTIDE, Phototropin-2
Authors:Engilberge, S, Caramello, N, Royant, A.
Deposit date:2022-06-10
Release date:2023-03-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Slow protein dynamics probed by time-resolved oscillation crystallography at room temperature.
Iucrj, 9, 2022
5KTE
DownloadVisualize
BU of 5kte by Molmil
Crystal structure of Deinococcus radiodurans MntH, an Nramp-family transition metal transporter
Descriptor: Divalent metal cation transporter MntH, Fab Heavy Chain, Fab Light Chain, ...
Authors:Bane, L.B, Gaudet, R, Weihofen, W.A, Singharoy, A.
Deposit date:2016-07-11
Release date:2016-11-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.941 Å)
Cite:Crystal Structure and Conformational Change Mechanism of a Bacterial Nramp-Family Divalent Metal Transporter.
Structure, 24, 2016
8A2W
DownloadVisualize
BU of 8a2w by Molmil
Room temperature structure of the ground state of AtPhot2LOV2 in space group P212121, as recovered 1620 seconds after light irradiation
Descriptor: FLAVIN MONONUCLEOTIDE, Phototropin-2
Authors:Engilberge, S, Caramello, N, Royant, A.
Deposit date:2022-06-06
Release date:2023-03-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Slow protein dynamics probed by time-resolved oscillation crystallography at room temperature.
Iucrj, 9, 2022
5LNV
DownloadVisualize
BU of 5lnv by Molmil
Crystal structure of Arabidopsis thaliana Pdx1-I320 complex from multiple crystals
Descriptor: (4~{S})-4-azanyl-5-oxidanyl-pent-1-en-3-one, PHOSPHATE ION, Pyridoxal 5'-phosphate synthase subunit PDX1.3, ...
Authors:Rodrigues, M.J, Windeisen, V, Zhang, Y, Guedez, G, Weber, S, Strohmeier, M, Hanes, J.W, Royant, A, Evans, G, Sinning, I, Ealick, S.E, Begley, T.P, Tews, I.
Deposit date:2016-08-06
Release date:2017-01-18
Last modified:2018-09-19
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Lysine relay mechanism coordinates intermediate transfer in vitamin B6 biosynthesis.
Nat. Chem. Biol., 13, 2017
2APH
DownloadVisualize
BU of 2aph by Molmil
Crystal structure of human PGRP-IalphaC in complex with muramyl pentapeptide
Descriptor: N-acetyl-beta-muramic acid, Peptidoglycan recognition protein I-alpha, SULFATE ION, ...
Authors:Guan, R, Roychowdjury, A, Boons, G, Mariuzza, R.A.
Deposit date:2005-08-16
Release date:2006-06-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of human peptidoglycan recognition protein I alpha bound to a muramyl pentapeptide from Gram-positive bacteria.
Protein Sci., 15, 2006
5LTQ
DownloadVisualize
BU of 5ltq by Molmil
Structure of the Yellow Fluorescent Protein lanYFP from Branchiostoma lanceolatum at pH 7.5
Descriptor: CHLORIDE ION, Green fluorescent protein blFP-Y3
Authors:Clavel, D, Gotthard, G, Royant, A.
Deposit date:2016-09-07
Release date:2016-12-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural analysis of the bright monomeric yellow-green fluorescent protein mNeonGreen obtained by directed evolution.
Acta Crystallogr D Struct Biol, 72, 2016
5AJG
DownloadVisualize
BU of 5ajg by Molmil
Structure of Infrared Fluorescent Protein IFP1.4 AT 1.11 Angstrom resolution
Descriptor: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, BACTERIOPHYTOCHROME
Authors:Lafaye, C, Shu, X, Royant, A.
Deposit date:2015-02-24
Release date:2016-03-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.11 Å)
Cite:Structural Determinants of Improved Fluorescence in a Family of Bacteriophytochrome-Based Infrared Fluorescent Proteins: Insights from Continuum Electrostatic Calculations and Molecular Dynamics Simulations.
Biochemistry, 55, 2016
5LK4
DownloadVisualize
BU of 5lk4 by Molmil
Structure of the Red Fluorescent Protein mScarlet at pH 7.8
Descriptor: DI(HYDROXYETHYL)ETHER, PHOSPHATE ION, TETRAETHYLENE GLYCOL, ...
Authors:Aumonier, S, Gotthard, G, Royant, A.
Deposit date:2016-07-20
Release date:2016-12-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:mScarlet: a bright monomeric red fluorescent protein for cellular imaging.
Nat. Methods, 14, 2017
5LNR
DownloadVisualize
BU of 5lnr by Molmil
Crystal structure of Arabidopsis thaliana Pdx1-PLP complex
Descriptor: GLYCEROL, PYRIDOXAL-5'-PHOSPHATE, Pyridoxal 5'-phosphate synthase subunit PDX1.3
Authors:Rodrigues, M.J, Windeisen, V, Zhang, Y, Guedez, G, Weber, S, Strohmeier, M, Hanes, J.W, Royant, A, Evans, G, Sinning, I, Ealick, S.E, Begley, T.P, Tews, I.
Deposit date:2016-08-06
Release date:2017-01-18
Last modified:2017-02-22
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Lysine relay mechanism coordinates intermediate transfer in vitamin B6 biosynthesis.
Nat. Chem. Biol., 13, 2017
5LNT
DownloadVisualize
BU of 5lnt by Molmil
Crystal structure of Arabidopsis thaliana Pdx1K166R-preI320 complex
Descriptor: PHOSPHATE ION, Pyridoxal 5'-phosphate synthase subunit PDX1.1, [(~{E},4~{S})-4-azanyl-3-oxidanylidene-pent-1-enyl] dihydrogen phosphate
Authors:Rodrigues, M.J, Windeisen, V, Zhang, Y, Guedez, G, Weber, S, Strohmeier, M, Hanes, J.W, Royant, A, Evans, G, Sinning, I, Ealick, S.E, Begley, T.P, Tews, I.
Deposit date:2016-08-06
Release date:2017-01-18
Last modified:2017-02-22
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Lysine relay mechanism coordinates intermediate transfer in vitamin B6 biosynthesis.
Nat. Chem. Biol., 13, 2017
5LTR
DownloadVisualize
BU of 5ltr by Molmil
Structure of the Yellow-Green Fluorescent Protein mNeonGreen from Branchiostoma lanceolatum at the near physiological pH 8.0
Descriptor: CHLORIDE ION, mNeonGreen
Authors:Clavel, D, Gotthard, G, Royant, A.
Deposit date:2016-09-07
Release date:2016-12-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:Structural analysis of the bright monomeric yellow-green fluorescent protein mNeonGreen obtained by directed evolution.
Acta Crystallogr D Struct Biol, 72, 2016
1QHJ
DownloadVisualize
BU of 1qhj by Molmil
X-RAY STRUCTURE OF BACTERIORHODOPSIN GROWN IN LIPIDIC CUBIC PHASES
Descriptor: 1,2-[DI-2,6,10,14-TETRAMETHYL-HEXADECAN-16-OXY]-PROPANE, PROTEIN (BACTERIORHODOPSIN), RETINAL
Authors:Belrhali, H, Nollert, P, Royant, A, Menzel, C, Rosenbusch, J.P, Landau, E.M, Pebay-Peyroula, E.
Deposit date:1999-05-04
Release date:1999-07-21
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Protein, lipid and water organization in bacteriorhodopsin crystals: a molecular view of the purple membrane at 1.9 A resolution.
Structure Fold.Des., 7, 1999
3B7U
DownloadVisualize
BU of 3b7u by Molmil
Leukotriene A4 Hydrolase Complexed with KELatorphan
Descriptor: ACETIC ACID, IMIDAZOLE, Leukotriene A-4 hydrolase, ...
Authors:Tholander, F, Haeggstrom, J, Thunnissen, M, Muroya, A, Roques, B.-P, Fournie-Zaluski, M.-C.
Deposit date:2007-10-31
Release date:2008-09-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-based dissection of the active site chemistry of leukotriene a4 hydrolase: implications for m1 aminopeptidases and inhibitor design.
Chem.Biol., 15, 2008
3B7R
DownloadVisualize
BU of 3b7r by Molmil
Leukotriene A4 Hydrolase Complexed with Inhibitor RB3040
Descriptor: IMIDAZOLE, Leukotriene A-4 hydrolase, N-[3-[(1-AMINOETHYL)(HYDROXY)PHOSPHORYL]-2-(1,1'-BIPHENYL-4-YLMETHYL)PROPANOYL]ALANINE, ...
Authors:Tholander, F, Haeggstrom, J, Thunnissen, M, Muroya, A, Roques, B.-P, Fournie-Zaluski, M.-C.
Deposit date:2007-10-31
Release date:2008-09-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.811 Å)
Cite:Structure-based dissection of the active site chemistry of leukotriene a4 hydrolase: implications for m1 aminopeptidases and inhibitor design.
Chem.Biol., 15, 2008

221716

數據於2024-06-26公開中

PDB statisticsPDBj update infoContact PDBjnumon